BLASTX nr result

ID: Cimicifuga21_contig00002340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002340
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22790.1| unknown [Picea sitchensis] gi|148907769|gb|ABR170...   232   8e-59
gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN409...   231   2e-58
gb|ABR17260.1| unknown [Picea sitchensis]                             230   3e-58
emb|CBI36518.3| unnamed protein product [Vitis vinifera]              229   9e-58
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   229   9e-58

>gb|ABK22790.1| unknown [Picea sitchensis] gi|148907769|gb|ABR17010.1| unknown
           [Picea sitchensis] gi|148909746|gb|ABR17964.1| unknown
           [Picea sitchensis] gi|148909851|gb|ABR18012.1| unknown
           [Picea sitchensis]
          Length = 141

 Score =  232 bits (592), Expect = 8e-59
 Identities = 109/123 (88%), Positives = 120/123 (97%)
 Frame = +3

Query: 267 GEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRAL 446
           GEPMDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+DCNQPDY KLV+AL
Sbjct: 19  GEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQAL 78

Query: 447 CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYV 626
           CA+HNV+LISVPSAK LGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEE+EGL+++QEYV
Sbjct: 79  CAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETEGLNVIQEYV 138

Query: 627 KSH 635
           K+H
Sbjct: 139 KTH 141


>gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN40906.1| unknown
           [Picea sitchensis]
          Length = 141

 Score =  231 bits (589), Expect = 2e-58
 Identities = 108/123 (87%), Positives = 120/123 (97%)
 Frame = +3

Query: 267 GEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRAL 446
           GEPMDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+DCNQPDY KLV+AL
Sbjct: 19  GEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQAL 78

Query: 447 CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYV 626
           CA+HNV+LISVPSAK LGEWAGLCKIDSEGKARKVVGCSC+VVKDYGEE+EGL+++QEYV
Sbjct: 79  CAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLNVIQEYV 138

Query: 627 KSH 635
           K+H
Sbjct: 139 KTH 141


>gb|ABR17260.1| unknown [Picea sitchensis]
          Length = 141

 Score =  230 bits (587), Expect = 3e-58
 Identities = 108/123 (87%), Positives = 119/123 (96%)
 Frame = +3

Query: 267 GEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRAL 446
           GEPMDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+DCNQPDY KLV+AL
Sbjct: 19  GEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAEDCNQPDYTKLVQAL 78

Query: 447 CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYV 626
           CA+HNV+LISVPSAK LGEWAGLCKIDSEGKARKVVGCSC VVKDYGEE+EGL+++QEYV
Sbjct: 79  CAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCFVVKDYGEETEGLNVIQEYV 138

Query: 627 KSH 635
           K+H
Sbjct: 139 KTH 141


>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  229 bits (583), Expect = 9e-58
 Identities = 109/123 (88%), Positives = 119/123 (96%)
 Frame = +3

Query: 267 GEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRAL 446
           GE +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV+A+DCNQPDY+KLV+AL
Sbjct: 55  GETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKAL 114

Query: 447 CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYV 626
           CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEE+ GLHIVQE+V
Sbjct: 115 CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEHV 174

Query: 627 KSH 635
           KS+
Sbjct: 175 KSN 177


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  229 bits (583), Expect = 9e-58
 Identities = 109/123 (88%), Positives = 119/123 (96%)
 Frame = +3

Query: 267 GEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVADDCNQPDYVKLVRAL 446
           GE +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV+A+DCNQPDY+KLV+AL
Sbjct: 18  GETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKAL 77

Query: 447 CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLHIVQEYV 626
           CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEE+ GLHIVQE+V
Sbjct: 78  CADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEHV 137

Query: 627 KSH 635
           KS+
Sbjct: 138 KSN 140


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