BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002339
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530366.1| Transmembrane and coiled-coil domains protei...   269   8e-70
ref|XP_002322739.1| predicted protein [Populus trichocarpa] gi|2...   262   1e-67
ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil dom...   261   2e-67
gb|ABK95312.1| unknown [Populus trichocarpa]                          259   5e-67
gb|AAM63240.1| unknown [Arabidopsis thaliana]                         259   5e-67

>ref|XP_002530366.1| Transmembrane and coiled-coil domains protein, putative [Ricinus
           communis] gi|223530113|gb|EEF32027.1| Transmembrane and
           coiled-coil domains protein, putative [Ricinus communis]
          Length = 192

 Score =  269 bits (687), Expect = 8e-70
 Identities = 141/186 (75%), Positives = 154/186 (82%), Gaps = 1/186 (0%)
 Frame = -3

Query: 877 LSSFKYSDALVVVFISICTAFLCEGISWILIYRTNSYKSLRSSIDKASKKLETMKTVVET 698
           LSSFKY+D+L VV IS+CTA +CE ISWILIYRTNSY+SL+SSIDKASKKLETMKT    
Sbjct: 7   LSSFKYADSLTVVGISMCTAVVCEAISWILIYRTNSYRSLKSSIDKASKKLETMKTDTTK 66

Query: 697 TKNTKSK-KKIDRVESSLKESTRDLSLSKFKSXXXXXXXXXXXXXLLNTLFEGKSVAKLP 521
               KSK KKIDRVE+SLKES+RDLSL KFKS             LLN+LFEGK VAKLP
Sbjct: 67  IITKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFIVFGLLNSLFEGKVVAKLP 126

Query: 520 FEPAALVQKMSHRGIPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAASAGLFPV 341
           F P A+V+KMSHRG+ GDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAA AGLFP+
Sbjct: 127 FTPIAIVRKMSHRGLQGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGLFPM 186

Query: 340 PDPKTN 323
           PDPKTN
Sbjct: 187 PDPKTN 192


>ref|XP_002322739.1| predicted protein [Populus trichocarpa] gi|222867369|gb|EEF04500.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  262 bits (669), Expect = 1e-67
 Identities = 140/190 (73%), Positives = 152/190 (80%), Gaps = 2/190 (1%)
 Frame = -3

Query: 886 EFILSSFKYSDALVVVFISICTAFLCEGISWILIYRTNSYKSLRSSIDKASKKLETMKTV 707
           +F LSS KYSD+L VV ISICTA +CE ISWILIYRTNSYKSL+SSIDKASKKLETMKT 
Sbjct: 5   QFFLSSSKYSDSLTVVGISICTAIICETISWILIYRTNSYKSLKSSIDKASKKLETMKTD 64

Query: 706 VETTKNTKSK-KKIDRVESSLKESTRDLSLSKFKSXXXXXXXXXXXXXLLNTLFEGKSVA 530
                  KSK KKIDRVESSLKES+RDLSL KFKS             LLN+LFEGK+VA
Sbjct: 65  TAKITTKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLIVVFGLLNSLFEGKAVA 124

Query: 529 KLPFEPAALVQKMSHRGIPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAA-SAG 353
           KLPF+P  LV KMSHRG+PG D+TDCSMAFLYFLCSISIRTNLQKFLGFSPPRG+A  AG
Sbjct: 125 KLPFQPITLVMKMSHRGLPGTDSTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGSAPGAG 184

Query: 352 LFPVPDPKTN 323
             P+PD KTN
Sbjct: 185 FLPLPDTKTN 194


>ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil domains protein 1 [Vitis
           vinifera] gi|297739810|emb|CBI29992.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score =  261 bits (667), Expect = 2e-67
 Identities = 135/188 (71%), Positives = 152/188 (80%), Gaps = 2/188 (1%)
 Frame = -3

Query: 880 ILSSFKYSDALVVVFISICTAFLCEGISWILIYRTNSYKSLRSSIDKASKKLETMKTVVE 701
           +LS  KYSD+L VV ISICTA +CE ISW+LIYRT SYK+LRSSID+A+KKLETMKT  +
Sbjct: 6   LLSGSKYSDSLAVVGISICTAIICEAISWLLIYRTTSYKTLRSSIDRAAKKLETMKTTSD 65

Query: 700 TTKNTKSKK--KIDRVESSLKESTRDLSLSKFKSXXXXXXXXXXXXXLLNTLFEGKSVAK 527
             K TK  K  K+DRVE+SLKES+RDLSL KFKS             LLN+LFEGKSVAK
Sbjct: 66  AQKFTKKSKTKKMDRVETSLKESSRDLSLFKFKSGAVVALVLFAVFGLLNSLFEGKSVAK 125

Query: 526 LPFEPAALVQKMSHRGIPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAASAGLF 347
           LPF P ++V KMSHRG+ G+D TDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAA AGLF
Sbjct: 126 LPFVPISIVMKMSHRGLNGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGLF 185

Query: 346 PVPDPKTN 323
           P+PDPKTN
Sbjct: 186 PMPDPKTN 193


>gb|ABK95312.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  259 bits (663), Expect = 5e-67
 Identities = 139/189 (73%), Positives = 151/189 (79%), Gaps = 2/189 (1%)
 Frame = -3

Query: 886 EFILSSFKYSDALVVVFISICTAFLCEGISWILIYRTNSYKSLRSSIDKASKKLETMKTV 707
           +F LSS KYSD+L VV ISICTA +CE ISWILIYRTNSYKSL+SSIDKASKKLETMKT 
Sbjct: 5   QFFLSSSKYSDSLTVVGISICTAIICETISWILIYRTNSYKSLKSSIDKASKKLETMKTD 64

Query: 706 VETTKNTKSK-KKIDRVESSLKESTRDLSLSKFKSXXXXXXXXXXXXXLLNTLFEGKSVA 530
                  KSK KKIDRVESSLKES+RDLSL KFKS             LLN+LFEGK+VA
Sbjct: 65  TAKITTKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLIVVFGLLNSLFEGKAVA 124

Query: 529 KLPFEPAALVQKMSHRGIPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAA-SAG 353
           KLPF+P  LV KMSHRG+PG D+TDCSMAFLYFLCSISIRTNLQKFLGFSPPRG+A  AG
Sbjct: 125 KLPFQPITLVMKMSHRGLPGTDSTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGSAPGAG 184

Query: 352 LFPVPDPKT 326
             P+PD KT
Sbjct: 185 FLPLPDTKT 193


>gb|AAM63240.1| unknown [Arabidopsis thaliana]
          Length = 196

 Score =  259 bits (663), Expect = 5e-67
 Identities = 139/190 (73%), Positives = 156/190 (82%), Gaps = 4/190 (2%)
 Frame = -3

Query: 880 ILSSFKYSDALVVVFISICTAFLCEGISWILIYRTNSYKSLRSSIDKASKKLETMKTVVE 701
           + +SFKY+D+L VV IS+CTA +CE ISWILIYRT+SYKSL+SSIDKASKKLETMKT   
Sbjct: 7   LFASFKYADSLTVVGISLCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNP 66

Query: 700 TTK--NTKSK-KKIDRVESSLKESTRDLSLSKFKSXXXXXXXXXXXXXLLNTLFEGKSVA 530
           ++K  N KSK KKIDRVESSLKES+RDLSL KFKS             LLN+LFEGK VA
Sbjct: 67  SSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVA 126

Query: 529 KLPFEPAALVQKMSHRGIPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAASA-G 353
           KLPF P  +V+KMSHRG+ GDD+TDCSMAFLY LCSISIRTNLQKFLGFSPPRGAA A G
Sbjct: 127 KLPFHPITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAGAGG 186

Query: 352 LFPVPDPKTN 323
           LFP+PDPKTN
Sbjct: 187 LFPMPDPKTN 196