BLASTX nr result

ID: Cimicifuga21_contig00002338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002338
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138091.1| PREDICTED: U-box domain-containing protein 5...   246   5e-63
ref|XP_003634243.1| PREDICTED: U-box domain-containing protein 5...   238   2e-60
emb|CAN79356.1| hypothetical protein VITISV_010065 [Vitis vinifera]   227   4e-57
ref|XP_002511332.1| ATP binding protein, putative [Ricinus commu...   221   2e-55
ref|XP_002322197.1| predicted protein [Populus trichocarpa] gi|2...   216   8e-54

>ref|XP_004138091.1| PREDICTED: U-box domain-containing protein 52-like [Cucumis
           sativus] gi|449522187|ref|XP_004168109.1| PREDICTED:
           U-box domain-containing protein 52-like [Cucumis
           sativus]
          Length = 239

 Score =  246 bits (629), Expect = 5e-63
 Identities = 135/235 (57%), Positives = 168/235 (71%), Gaps = 11/235 (4%)
 Frame = -2

Query: 876 EEKKSGWSEEQRQYQNRHILSPEIVEI-DESKSFTSSTRDGGNNVYVAVGKDDLDVLKWA 700
           EE +   +E Q Q  +  I+SPEIVEI DESK+  SS   G  +VYVAVGKDD+DVLKWA
Sbjct: 3   EEFQGRATELQLQCYSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWA 62

Query: 699 LNHAVLPGAYVFLIHVFPPANYIPTPVGKMPRSQASQEQVKTFXXXXXXXXXXXLQKYVR 520
           L+HAV PG  VFL+HVFPP  YIPTPVG++ RSQ SQEQ++ +           LQKY+R
Sbjct: 63  LDHAVSPGCCVFLLHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIR 122

Query: 519 LCNDSKVTVETMLIESNQAAKAILELVPVLNITMLVMGTKKP-SSRKLKMGLGKGKFVQK 343
           LC D+KVTV+T+L+ESN  AKAIL+L+PVLNIT LV+GTKKP SS+ L   + KG+FV+K
Sbjct: 123 LCTDAKVTVDTLLLESNTTAKAILQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEFVKK 182

Query: 342 NAPEFCEVTIVFGGEKVTEIQQ-VALEKSQEQSG--------RLFDCVCFSGKSS 205
           NAPE+CEVT+V+ G+KV E QQ + L  S + SG         LF+CVC S KSS
Sbjct: 183 NAPEYCEVTVVYEGKKVNECQQEMGLLPSSKDSGLRQQRSGKNLFECVCLSSKSS 237


>ref|XP_003634243.1| PREDICTED: U-box domain-containing protein 54-like [Vitis vinifera]
           gi|297733717|emb|CBI14964.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  238 bits (607), Expect = 2e-60
 Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 15/238 (6%)
 Frame = -2

Query: 879 IEEKKSGWSEEQRQYQNRHILSPEIVEIDE-SKSFTSSTRDGGNNVYVAVGKDDLDVLKW 703
           +EE+      E+ QYQ+  + SPEIVEI E SKSFTSS   G  +VYVAVG+DDLDVLKW
Sbjct: 1   MEEENYKKQAEEWQYQSMPMKSPEIVEIGEDSKSFTSSREGGFKDVYVAVGRDDLDVLKW 60

Query: 702 ALNHAVLPGAYVFLIHVFPPANYIPTPVGKMPRSQASQEQVKTFXXXXXXXXXXXLQKYV 523
           AL+H+V P A +FL+HVFPP  YI TPVG++ RSQ S+EQ+K +           LQKY+
Sbjct: 61  ALDHSVSPQARIFLVHVFPPQTYISTPVGRLSRSQLSKEQLKVYINEENNRRRNLLQKYI 120

Query: 522 RLCNDSKVTVETMLIESNQAAKAILELVPVLNITMLVMGTKK-PSSRKLKMGLGKGKFVQ 346
           RLC D+KVTV+TML+ESN   KAIL+L+PVLNIT LV+GTK+ P  R+    LG G+F+Q
Sbjct: 121 RLCTDAKVTVDTMLLESNTTTKAILDLIPVLNITNLVIGTKRPPCPRRSWKKLGTGEFIQ 180

Query: 345 KNAPEFCEVTIVFGGEKVTEIQQVA-------------LEKSQEQSGRLFDCVCFSGK 211
           KNAPEFCEVTIVF G+KV + +QV               E ++      F+C CFSGK
Sbjct: 181 KNAPEFCEVTIVFDGKKVLDGEQVGELVHSSPASSHRKPETTRNSERNFFECACFSGK 238


>emb|CAN79356.1| hypothetical protein VITISV_010065 [Vitis vinifera]
          Length = 230

 Score =  227 bits (578), Expect = 4e-57
 Identities = 120/203 (59%), Positives = 150/203 (73%), Gaps = 2/203 (0%)
 Frame = -2

Query: 879 IEEKKSGWSEEQRQYQNRHILSPEIVEIDE-SKSFTSSTRDGGNNVYVAVGKDDLDVLKW 703
           +EE+      E+ QYQ+  + SPEIVEI E SKSFTSS   G  +VYVAVG+DDLDVLKW
Sbjct: 1   MEEENYKKQAEEWQYQSMPMKSPEIVEIGEDSKSFTSSREGGFKDVYVAVGRDDLDVLKW 60

Query: 702 ALNHAVLPGAYVFLIHVFPPANYIPTPVGKMPRSQASQEQVKTFXXXXXXXXXXXLQKYV 523
           AL+H+V P A +FL+HVFPP  YI TPVG++ RSQ S+EQ+K +           LQKY+
Sbjct: 61  ALDHSVSPQARIFLVHVFPPQTYISTPVGRLSRSQLSKEQLKXYINEENNRRRNLLQKYI 120

Query: 522 RLCNDSKVTVETMLIESNQAAKAILELVPVLNITMLVMGTKK-PSSRKLKMGLGKGKFVQ 346
           RLC D+KVTV+TML+ESN   KAIL+L+PVLNIT LV+GTK+ P  R+    LG G+F+Q
Sbjct: 121 RLCTDAKVTVDTMLLESNTTTKAILDLIPVLNITNLVIGTKRPPCPRRSWKKLGTGEFIQ 180

Query: 345 KNAPEFCEVTIVFGGEKVTEIQQ 277
           KNAPEFCEVTIVF G+KV + +Q
Sbjct: 181 KNAPEFCEVTIVFDGKKVLDGEQ 203


>ref|XP_002511332.1| ATP binding protein, putative [Ricinus communis]
           gi|223550447|gb|EEF51934.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  221 bits (564), Expect = 2e-55
 Identities = 120/224 (53%), Positives = 154/224 (68%), Gaps = 14/224 (6%)
 Frame = -2

Query: 840 QYQNR-HILSPEIVEIDESKSFTSSTRDGGN--NVYVAVGKDDLDVLKWALNHAVLPGAY 670
           QY N   I+S EIVEI +     +S+RDGG   +VYVAVGKDDL VLKWAL+ AV PG  
Sbjct: 16  QYCNSARIMSSEIVEIGDDSRSIASSRDGGCFLDVYVAVGKDDLHVLKWALDRAVSPGTR 75

Query: 669 VFLIHVFPPANYIPTPVGKMPRSQASQEQVKTFXXXXXXXXXXXLQKYVRLCNDSKVTVE 490
           VFL+HVFPP  YIPTPVG++ RSQ SQ+QV+ +           LQKY+RLCND+KVTV+
Sbjct: 76  VFLVHVFPPITYIPTPVGRLSRSQLSQDQVRFYINEEHNRRRSILQKYIRLCNDAKVTVD 135

Query: 489 TMLIESNQAAKAILELVPVLNITMLVMG-TKKPSSRKLKMGLGKGKFVQKNAPEFCEVTI 313
           TMLIESN+ AKAIL+L+PVLNIT LVMG T+ P SR L+  L K +FV+KNAP++CEVT+
Sbjct: 136 TMLIESNETAKAILDLIPVLNITNLVMGTTRPPRSRLLRKRLAKAEFVKKNAPDYCEVTV 195

Query: 312 VFGGEKVTEIQQVALEK----------SQEQSGRLFDCVCFSGK 211
           V   +K+ E ++V              ++    + F+CVCFS +
Sbjct: 196 VHDEKKIAESKEVVHSSLSSSTRRPDITRNSDRKFFECVCFSSR 239


>ref|XP_002322197.1| predicted protein [Populus trichocarpa] gi|222869193|gb|EEF06324.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  216 bits (550), Expect = 8e-54
 Identities = 116/215 (53%), Positives = 155/215 (72%), Gaps = 11/215 (5%)
 Frame = -2

Query: 822 ILSPEIVEI-DESKSFTSSTRDGGNNVYVAVGKDDLDVLKWALNHAVLPGAYVFLIHVFP 646
           I+SPEIVEI D+SK+ T+S     ++VYVAVGK+D DVLKWAL+HAV PGA VFL+HVFP
Sbjct: 18  IMSPEIVEIGDDSKTITNSIDGINDDVYVAVGKNDTDVLKWALDHAVSPGARVFLVHVFP 77

Query: 645 PANYIPTPVGKMPRSQASQEQVKTFXXXXXXXXXXXLQKYVRLCNDSKVTVETMLIESNQ 466
           P +YIPTPVG++ RSQ SQ+QV+ +           LQKY+RLC ++KVTV+TML+ESN 
Sbjct: 78  PLSYIPTPVGRLSRSQLSQDQVRFYINEENNRRRNQLQKYIRLCANAKVTVDTMLLESNL 137

Query: 465 AAKAILELVPVLNITMLVMGTKK-PSSRKLKMGLGKGKFVQKNAPEFCEVTIVFGGEKVT 289
            AK ILEL+PVLNIT LVMG K+ P SR L+  LGKG+FV+K AP++CEV+I+  G+K+ 
Sbjct: 138 TAKTILELIPVLNITHLVMGNKRLPRSRLLRKKLGKGEFVKKKAPDYCEVSIIHNGKKIM 197

Query: 288 E----IQQVAL-----EKSQEQSGRLFDCVCFSGK 211
           +    I+ V+      +  +  + + F+  CF GK
Sbjct: 198 DGKDGIEPVSSCARRPDVIRSSANKFFNLPCFPGK 232


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