BLASTX nr result

ID: Cimicifuga21_contig00002337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002337
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   328   2e-87
emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   327   6e-87
ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   315   1e-83
ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populu...   314   3e-83
emb|CBI36206.3| unnamed protein product [Vitis vinifera]              311   2e-82

>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
           gi|297743336|emb|CBI36203.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  328 bits (841), Expect = 2e-87
 Identities = 167/312 (53%), Positives = 214/312 (68%), Gaps = 4/312 (1%)
 Frame = +3

Query: 66  MGSLSSTKVPVINFSVKDLMPGTSSWCSVRTEVRRALEEYGCFEAIFGEIQVHRDMLN-- 239
           MGS  + ++PV+NFS   L PGT SW     +V  ALEEYGCF A++ ++    D     
Sbjct: 1   MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 240 AMEQLFDLPLETRLKHPSNDRNKGK--PDPQIPLWANMGISDVQDLDRLQSFTNLMWPEG 413
            +E+LFDLP ET++K+ S+    G     P IPL  +MGI D   L  ++SFTN+MWP G
Sbjct: 60  QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 414 NSKFCESVNSYVKEGTTIEHMVKRMVFESFGAEGYFDSLAELTTYWIRLNRYRAPKTNET 593
           N  FCE+V SY K  + +E MVK+MVFES+ AE Y+DS  + TTY +RL +YR P+ NET
Sbjct: 120 NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 594 NLGLKVHTDTSFISVLSQNDVHGLEIQAKDGQWIDVTPEPSSFVVLGGDALLAWSNGRLH 773
            +G   HTD SFI+VL QN+V GLEI+ KDG+WI   P PSS+VV+ GDALLAWSNGR+H
Sbjct: 180 CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 774 APPHRVIMNVDHMRYSIALFAFVKGIIQTPEELVDEEHPLLFKPFDHFGYRQFITTEEGQ 953
           +P HRVIMN +  RYSI LFA+ +GII+ PEEL DEEHPL FKPF+H+G   F  T +  
Sbjct: 240 SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYFTNKAG 299

Query: 954 KAASPIKAFCGV 989
           +A S  KA+CGV
Sbjct: 300 QAESTAKAYCGV 311


>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  327 bits (837), Expect = 6e-87
 Identities = 166/312 (53%), Positives = 213/312 (68%), Gaps = 4/312 (1%)
 Frame = +3

Query: 66  MGSLSSTKVPVINFSVKDLMPGTSSWCSVRTEVRRALEEYGCFEAIFGEIQVHRDMLN-- 239
           MGS  + ++PV+NFS   L PGT SW     +V  ALEEYGCF A++ ++    D     
Sbjct: 1   MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 240 AMEQLFDLPLETRLKHPSNDRNKGK--PDPQIPLWANMGISDVQDLDRLQSFTNLMWPEG 413
            +E+LFDLP ET++K+ S+    G     P IPL  +MGI D   L  ++SFTN+MWP G
Sbjct: 60  QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 414 NSKFCESVNSYVKEGTTIEHMVKRMVFESFGAEGYFDSLAELTTYWIRLNRYRAPKTNET 593
           N  FCE+V SY K  + +E MVK+MVFES+ AE Y+DS  + TTY +RL +YR P+ NET
Sbjct: 120 NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 594 NLGLKVHTDTSFISVLSQNDVHGLEIQAKDGQWIDVTPEPSSFVVLGGDALLAWSNGRLH 773
            +G   HTD SFI+VL QN+V GLEI+ KDG+WI   P PSS+VV+ GDALLAWSNGR+H
Sbjct: 180 CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 774 APPHRVIMNVDHMRYSIALFAFVKGIIQTPEELVDEEHPLLFKPFDHFGYRQFITTEEGQ 953
           +P HRVIMN +  RYSI LFA+ +GII+ PEEL DEEHPL FKPF+H+G   F  T +  
Sbjct: 240 SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYFTNKAG 299

Query: 954 KAASPIKAFCGV 989
           +  S  KA+CGV
Sbjct: 300 QTESTAKAYCGV 311


>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
           gi|297743335|emb|CBI36202.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  315 bits (808), Expect = 1e-83
 Identities = 149/314 (47%), Positives = 214/314 (68%), Gaps = 6/314 (1%)
 Frame = +3

Query: 66  MGSLSSTKVPVINFSVKDLMPGTSSWCSVRTEVRRALEEYGCFEAIFGEI--QVHRDMLN 239
           MGS +  K+PVI+FS  +L PGT  W  V+ +V++ALEEYGCFEA F ++   + + +  
Sbjct: 1   MGSETPLKLPVIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFG 60

Query: 240 AMEQLFDLPLETRLKHPSNDRNKGKPD--PQIPLWANMGISDVQDLDRLQSFTNLMWPEG 413
           A+E+LFDLPL+T+L++ S     G     P +PL+ +MGI D    ++ + FT L+WPEG
Sbjct: 61  ALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEG 120

Query: 414 NSKFCESVNSYVKEGTTIEHMVKRMVFESFGAEGYFDSLAELTTYWIRLNRYRAPKTNET 593
           N  FC+++ S+ ++ + ++H ++RMV ES G E Y D   + T Y +R+ +Y+ P+T ET
Sbjct: 121 NPNFCKTIQSFSEQLSELDHTIRRMVLESLGMEKYLDEHMDSTNYLLRVMKYKGPQTTET 180

Query: 594 NLGLKVHTDTSFISVLSQNDVHGLEIQAKDGQWIDVTPEPSSFVVLGGDALLAWSNGRLH 773
            LGL  HTD + +++L QN V GL +Q KDGQWI++   P SF+++ GD+ LAW+NGRLH
Sbjct: 181 KLGLNAHTDKNIVTILYQNQVDGLGVQTKDGQWINIKCSPDSFIIMIGDSFLAWTNGRLH 240

Query: 774 APPHRVIMNVDHMRYSIALFAFVKG--IIQTPEELVDEEHPLLFKPFDHFGYRQFITTEE 947
           +P HRV+M  +  RYS  LF+  K   +I+ PEELVDEEHPLLFKPFDH  + QF  TE 
Sbjct: 241 SPYHRVMMTGNESRYSTGLFSIPKAGYVIKAPEELVDEEHPLLFKPFDHLEFLQFYYTEA 300

Query: 948 GQKAASPIKAFCGV 989
           GQ+A S +K +CGV
Sbjct: 301 GQRAESALKTYCGV 314


>ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  314 bits (805), Expect = 3e-83
 Identities = 157/306 (51%), Positives = 208/306 (67%), Gaps = 4/306 (1%)
 Frame = +3

Query: 84  TKVPVINFSVKDLMPGTSSWCSVRTEVRRALEEYGCFEAIFGEIQVH-RD-MLNAMEQLF 257
           +K+P+++F+ +DL PGTSSW    ++VR ALEEYGCF   +  + +  RD +   +++LF
Sbjct: 8   SKLPILDFAKEDLKPGTSSWLKACSDVRLALEEYGCFVVEYNRLPLELRDKVFGVLKELF 67

Query: 258 DLPLETRLKHPSNDRNKGKPDP--QIPLWANMGISDVQDLDRLQSFTNLMWPEGNSKFCE 431
           DLP ET++++       G      ++PL  +MGI +   LD  Q+FT+LMWP GN +FCE
Sbjct: 68  DLPTETKMQNKYEKPLNGYVGQIAKLPLHESMGIDNATSLDATQNFTDLMWPNGNDRFCE 127

Query: 432 SVNSYVKEGTTIEHMVKRMVFESFGAEGYFDSLAELTTYWIRLNRYRAPKTNETNLGLKV 611
            V  Y      ++ MV RMVFES+G E Y DS  E TTY +RL + R PK +E NLG   
Sbjct: 128 CVLKYANLAAELDRMVTRMVFESYGVEKYHDSYVESTTYLLRLLKNRPPKVDEHNLGFVT 187

Query: 612 HTDTSFISVLSQNDVHGLEIQAKDGQWIDVTPEPSSFVVLGGDALLAWSNGRLHAPPHRV 791
           HTD SF ++L QN+++GLE+  KDG+ I+V   PSSFVV+ GDAL+AWSN R+ +P HRV
Sbjct: 188 HTDKSFTTILHQNEINGLEVDTKDGKKINVELSPSSFVVIAGDALMAWSNDRVISPSHRV 247

Query: 792 IMNVDHMRYSIALFAFVKGIIQTPEELVDEEHPLLFKPFDHFGYRQFITTEEGQKAASPI 971
           IMN    RYS+ALFAF KGI+Q PEELVDEEHPL++KP DH G   F  TEEG K+  PI
Sbjct: 248 IMNGKIDRYSLALFAFNKGILQVPEELVDEEHPLMYKPLDHIGLLHFYRTEEGYKSKCPI 307

Query: 972 KAFCGV 989
           KA+CGV
Sbjct: 308 KAYCGV 313


>emb|CBI36206.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  311 bits (798), Expect = 2e-82
 Identities = 154/313 (49%), Positives = 210/313 (67%), Gaps = 5/313 (1%)
 Frame = +3

Query: 66   MGSLSSTKVPVINFSVKDLMPGTSSWCSVRTEVRRALEEYGCFEAIFGEI--QVHRDMLN 239
            MGS +  K+P+I+FS ++L PG+ SW SV  +VR ALEEYGCF A + ++  ++H  + N
Sbjct: 149  MGSETHPKLPIIDFSEENLKPGSDSWFSVCHDVRHALEEYGCFMAYYNQVPLELHNKIFN 208

Query: 240  AMEQLFDLPLETRLKHPSNDRNKGKPD--PQIPLWANMGISDVQDLDRLQSFTNLMWPEG 413
            A+ +LFDLP E ++K+ S+  + G     P  PL  +MGI    +L+ +QSF  LMWP G
Sbjct: 209  ALGELFDLPTEIKVKNTSDKPSHGYIGQIPAYPLHESMGIDHATNLEEIQSFAKLMWPAG 268

Query: 414  NSKFCESVNSYVKEGTTIEHMVKRMVFESFGAEGYFDSLAELTTYWIRLNRYRAPKTNET 593
            N  FCE V+SY      +E +V RMV +S+G E YFDS    T Y +R  + R PK NE 
Sbjct: 269  NEHFCEVVHSYTSLLAELEQVVMRMVLQSYGIEKYFDSHIASTRYLLRCLKNRVPKMNEN 328

Query: 594  NLGLKVHTDTSFISVLSQNDVHGLEIQAKDGQWIDV-TPEPSSFVVLGGDALLAWSNGRL 770
            ++    H+D SF+++L QN V GLE+  KDG+ I    P PS F+V+ GDA +AWSNGR+
Sbjct: 329  DIAFPTHSDKSFMTILQQNHVSGLEVDTKDGKSIGFGPPSPSVFIVIAGDAFMAWSNGRI 388

Query: 771  HAPPHRVIMNVDHMRYSIALFAFVKGIIQTPEELVDEEHPLLFKPFDHFGYRQFITTEEG 950
            H P HRVIM  +  RYS+ALFAF  G+I+ PEELVD++HPL FKPFDH G+ +F  TEEG
Sbjct: 389  HPPKHRVIMRANEERYSLALFAFKNGMIKVPEELVDDKHPLQFKPFDHVGFIRFFHTEEG 448

Query: 951  QKAASPIKAFCGV 989
            +K+ S IKA+CG+
Sbjct: 449  RKSNSAIKAYCGI 461



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 43/88 (48%), Positives = 59/88 (67%)
 Frame = +3

Query: 432 SVNSYVKEGTTIEHMVKRMVFESFGAEGYFDSLAELTTYWIRLNRYRAPKTNETNLGLKV 611
           +V+ Y K  + +E +V RMV ES+G E  F   +   T+ IR  +YR PK NET++ +  
Sbjct: 50  TVHCYSKLLSELEQIVMRMVLESYGIENDFHIGS--ATFLIRFLKYRVPKMNETSISVPP 107

Query: 612 HTDTSFISVLSQNDVHGLEIQAKDGQWI 695
           HTD SFIS+L QN V+GLEI+ KDG+WI
Sbjct: 108 HTDKSFISILHQNQVNGLEIETKDGKWI 135


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