BLASTX nr result
ID: Cimicifuga21_contig00002316
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00002316
(2127 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282761.1| PREDICTED: 1-deoxy-D-xylulose 5-phosphate re... 785 0.0
ref|XP_002511399.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer... 776 0.0
ref|XP_002318048.1| predicted protein [Populus trichocarpa] gi|2... 774 0.0
gb|ABD92702.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [... 774 0.0
gb|EAY72208.1| hypothetical protein OsI_00059 [Oryza sativa Indi... 772 0.0
>ref|XP_002282761.1| PREDICTED: 1-deoxy-D-xylulose 5-phosphate reductoisomerase,
chloroplastic [Vitis vinifera]
gi|297733784|emb|CBI15031.3| unnamed protein product
[Vitis vinifera]
Length = 471
Score = 785 bits (2026), Expect = 0.0
Identities = 390/470 (82%), Positives = 417/470 (88%), Gaps = 1/470 (0%)
Frame = +2
Query: 344 SLKLTSPGEIGAISFLDSAKPD-LFKLKGGVVLKRRENAKKFGRRASCSVQSVPPAWPGR 520
+L L P EI ISFLDS K L KL GG VLKR++ FGRR +CS Q PPAWPGR
Sbjct: 2 ALNLLPPAEIKLISFLDSTKSTRLPKLPGGFVLKRKDYGATFGRRVNCSAQPPPPAWPGR 61
Query: 521 AVTEPGRKVWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAEQVKT 700
AV E GRK WDGPKP+S+VGSTGSIGTQTLDIVAENPDKFR+VALAAGSNVTLLA+QVKT
Sbjct: 62 AVPELGRKTWDGPKPLSVVGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKT 121
Query: 701 FRPQLVAVRNESLIKELKEALADADYKPXXXXXXXXXXXXXRHRDAVTVVTGIVGCAGLK 880
F+PQLVAVRNE+L+ ELKEALAD ++KP RH +AVTVVTGIVGCAGLK
Sbjct: 122 FKPQLVAVRNEALVNELKEALADCEHKPEIIPGEQGVIEVARHPEAVTVVTGIVGCAGLK 181
Query: 881 PTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGAL 1060
PTVAAIEAGKDIALANKETLIAGGPFVLPLA KHNVKILPADSEHSAIFQCIQGLPEGAL
Sbjct: 182 PTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGAL 241
Query: 1061 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 1240
RRI+LTASGGAFRDWPV+KLKE KV+DALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL
Sbjct: 242 RRILLTASGGAFRDWPVDKLKEAKVSDALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 301
Query: 1241 FGAEYDDIEIVIHPESIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWP 1420
FGAEYDDIEI+IHP+SIIHSM+ETQDSSVLAQLGWPDMRLPILYTLSWPDR+YCSEITWP
Sbjct: 302 FGAEYDDIEIIIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCSEITWP 361
Query: 1421 RLDLCKQGSLTFKAPDNVKYPSMHLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKIAYLD 1600
RLDLCK GSLTFK PDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVEMFIDEKI YLD
Sbjct: 362 RLDLCKLGSLTFKTPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLD 421
Query: 1601 IFKVVELTCEKHQEELVTQPSLEEIIHYDLWAREYAANIKLQSGLSPVPA 1750
IFKVVELTC+KHQ ELVT PSLEEI+HYDLWAR+YAA++ S L PVPA
Sbjct: 422 IFKVVELTCDKHQAELVTSPSLEEIVHYDLWARDYAASLHHSSSLMPVPA 471
>ref|XP_002511399.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast
precursor, putative [Ricinus communis]
gi|223550514|gb|EEF52001.1| 1-deoxy-D-xylulose
5-phosphate reductoisomerase, chloroplast precursor,
putative [Ricinus communis]
Length = 467
Score = 776 bits (2004), Expect = 0.0
Identities = 388/470 (82%), Positives = 421/470 (89%), Gaps = 1/470 (0%)
Frame = +2
Query: 344 SLKLTSPGEIGAISFLDSAKPD-LFKLKGGVVLKRRENAKKFGRRASCSVQSVPPAWPGR 520
+L L SP E+ ++SFLDS + L KL G LKR+E FGR+ CS Q+ PPAWPGR
Sbjct: 2 ALNLLSPAELKSVSFLDSTRSSQLPKLPGSFSLKRKE----FGRKVQCSAQAPPPAWPGR 57
Query: 521 AVTEPGRKVWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAEQVKT 700
AV EPGRK WDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLA+QVKT
Sbjct: 58 AVAEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKT 117
Query: 701 FRPQLVAVRNESLIKELKEALADADYKPXXXXXXXXXXXXXRHRDAVTVVTGIVGCAGLK 880
F+PQLV+VR+ESL+ ELKEALAD D KP RH DAV+VVTGIVGCAGLK
Sbjct: 118 FKPQLVSVRDESLVDELKEALADVDEKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLK 177
Query: 881 PTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGAL 1060
PTVAAIEAGKDI LANKETLIAGGPFVLPLA K+NVKILPADSEHSAIFQCIQGLPEGAL
Sbjct: 178 PTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPEGAL 237
Query: 1061 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 1240
RRIILTASGGAFRDWPVEKLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL
Sbjct: 238 RRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 297
Query: 1241 FGAEYDDIEIVIHPESIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWP 1420
FGA+YD+IEIVIHP+SIIHSM+ET+DSSVLAQLGWPDMR+PILYT+SWPDR+YCSEITWP
Sbjct: 298 FGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEITWP 357
Query: 1421 RLDLCKQGSLTFKAPDNVKYPSMHLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKIAYLD 1600
RLDLCK GSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVEMFIDE+I+YLD
Sbjct: 358 RLDLCKLGSLTFKAPDNVKYPSMELAYAAGRAGGTMTGVLSAANEKAVEMFIDEQISYLD 417
Query: 1601 IFKVVELTCEKHQEELVTQPSLEEIIHYDLWAREYAANIKLQSGLSPVPA 1750
IFK+VELTC+KH+ ELVT PSLEEIIHYDLWAREYAA+++ SGLSPV A
Sbjct: 418 IFKIVELTCDKHRAELVTSPSLEEIIHYDLWAREYAASLQPSSGLSPVLA 467
>ref|XP_002318048.1| predicted protein [Populus trichocarpa] gi|222858721|gb|EEE96268.1|
predicted protein [Populus trichocarpa]
Length = 471
Score = 774 bits (1999), Expect = 0.0
Identities = 393/471 (83%), Positives = 421/471 (89%), Gaps = 4/471 (0%)
Frame = +2
Query: 344 SLKLTSPGEIGAISFLDSAKPD-LFKLKGGVVLKRRENAKKFGRRASCSVQSV---PPAW 511
+L + SP EI AISFLDS K + L KL+GG+ LKR++ GRR CSVQ+ PPAW
Sbjct: 2 ALNILSPAEIKAISFLDSTKSNRLPKLQGGLSLKRKDCG---GRRIQCSVQNQNQPPPAW 58
Query: 512 PGRAVTEPGRKVWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAEQ 691
PGRA EPGRK WDGPKPISIVGSTGSIGTQTLDIVAENPDKF+VVALAAGSNVTLLA+Q
Sbjct: 59 PGRACPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQ 118
Query: 692 VKTFRPQLVAVRNESLIKELKEALADADYKPXXXXXXXXXXXXXRHRDAVTVVTGIVGCA 871
V+TF+PQL+AVRNESL+ E+KEALAD + KP RH DAV+VVTGIVGCA
Sbjct: 119 VRTFKPQLIAVRNESLVDEIKEALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIVGCA 178
Query: 872 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPE 1051
GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLA K+NVKILPADSEHSAIFQCIQGLPE
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPE 238
Query: 1052 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 1231
GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298
Query: 1232 HYLFGAEYDDIEIVIHPESIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEI 1411
HYLFGA+YD+I+IVIHP+SIIHSMIETQDSSVLAQLGWPDMRLPILYT+SWPDRVYCSEI
Sbjct: 299 HYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVYCSEI 358
Query: 1412 TWPRLDLCKQGSLTFKAPDNVKYPSMHLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKIA 1591
TWPRLDLCK GSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVEMFIDEKI+
Sbjct: 359 TWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIS 418
Query: 1592 YLDIFKVVELTCEKHQEELVTQPSLEEIIHYDLWAREYAANIKLQSGLSPV 1744
YLDIFKVVELTC+KHQ ELV PSLEEIIHYDLWAREYAAN++ SG SPV
Sbjct: 419 YLDIFKVVELTCDKHQAELVVSPSLEEIIHYDLWAREYAANLQHSSGPSPV 469
>gb|ABD92702.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]
gi|94421688|gb|ABF18928.1| putative 1-deoxy-D-xylulose
5-phosphate reductoisomerase [Hevea brasiliensis]
Length = 471
Score = 774 bits (1998), Expect = 0.0
Identities = 387/470 (82%), Positives = 417/470 (88%), Gaps = 1/470 (0%)
Frame = +2
Query: 344 SLKLTSPGEIGAISFLDSAKPD-LFKLKGGVVLKRRENAKKFGRRASCSVQSVPPAWPGR 520
+L L SP EI AISFLDS K L KL GG LKR++ FG++ CS Q PPAWPGR
Sbjct: 2 ALNLLSPAEIKAISFLDSTKSSHLTKLPGGFSLKRKDFGAAFGKKVQCSAQPPPPAWPGR 61
Query: 521 AVTEPGRKVWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAEQVKT 700
A + GRK WDGPKPIS+VGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLA+QVKT
Sbjct: 62 AFPDLGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKT 121
Query: 701 FRPQLVAVRNESLIKELKEALADADYKPXXXXXXXXXXXXXRHRDAVTVVTGIVGCAGLK 880
F+PQLVAVRNESL+ EL+EALAD + KP RH DAV+VVTGIVGCAGLK
Sbjct: 122 FKPQLVAVRNESLVHELREALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIVGCAGLK 181
Query: 881 PTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGAL 1060
PTVAAIEAGKDI LANKETLIAGGPFVLPLA K+NVKILPADSEHSAIFQCIQGLP+GAL
Sbjct: 182 PTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPDGAL 241
Query: 1061 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 1240
RRIILTASGGAFRDWPV+KLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL
Sbjct: 242 RRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 301
Query: 1241 FGAEYDDIEIVIHPESIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWP 1420
FGAEYD+IEIVIHP+SIIHSM+ETQDSSVLAQLGWPDMRLPILYT+SWPDR+YCSEITWP
Sbjct: 302 FGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPDRIYCSEITWP 361
Query: 1421 RLDLCKQGSLTFKAPDNVKYPSMHLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKIAYLD 1600
RLDLCK GSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVEMFI+EKI YLD
Sbjct: 362 RLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFINEKIGYLD 421
Query: 1601 IFKVVELTCEKHQEELVTQPSLEEIIHYDLWAREYAANIKLQSGLSPVPA 1750
IFK+VELTC+KH+ ELV PSLEEIIHYDLWAR+YAA+++ SGLSPV A
Sbjct: 422 IFKIVELTCDKHRSELVASPSLEEIIHYDLWARDYAASLQPTSGLSPVLA 471
>gb|EAY72208.1| hypothetical protein OsI_00059 [Oryza sativa Indica Group]
Length = 473
Score = 772 bits (1993), Expect = 0.0
Identities = 389/471 (82%), Positives = 421/471 (89%), Gaps = 3/471 (0%)
Frame = +2
Query: 344 SLKLTS-PGEIGAISFLDSAKPDLF-KLKGGVVLKRRENAKKFGRRASCSVQSVPP-AWP 514
+LK+ S PG++ A+SFLDS + F +LK + + R+ RR CS+Q PP AWP
Sbjct: 2 ALKVVSFPGDLAAVSFLDSNRGGAFNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPAWP 61
Query: 515 GRAVTEPGRKVWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAEQV 694
GRAV EPGR+ WDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLA+QV
Sbjct: 62 GRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQV 121
Query: 695 KTFRPQLVAVRNESLIKELKEALADADYKPXXXXXXXXXXXXXRHRDAVTVVTGIVGCAG 874
KTF+P+LVAVRNESL+ ELKEALAD D+KP RH DAVTVVTGIVGCAG
Sbjct: 122 KTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAG 181
Query: 875 LKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEG 1054
LKPTVAAIEAGKDIALANKETLIAGGPFVLPLA+KH VKILPADSEHSAIFQCIQGLPEG
Sbjct: 182 LKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLPEG 241
Query: 1055 ALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAH 1234
ALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAH
Sbjct: 242 ALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAH 301
Query: 1235 YLFGAEYDDIEIVIHPESIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEIT 1414
YLFGAEYDDIEIVIHP+SIIHSMIETQDSSVLAQLGWPDMR+PILYT+SWPDR+YCSEIT
Sbjct: 302 YLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEIT 361
Query: 1415 WPRLDLCKQGSLTFKAPDNVKYPSMHLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKIAY 1594
WPRLDLCK GSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKI Y
Sbjct: 362 WPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFIDEKIGY 421
Query: 1595 LDIFKVVELTCEKHQEELVTQPSLEEIIHYDLWAREYAANIKLQSGLSPVP 1747
LDIFKVVELTC+ H+ ELVT+PSLEEIIHYDLWAREYAA+++ +GLSPVP
Sbjct: 422 LDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPVP 472