BLASTX nr result

ID: Cimicifuga21_contig00002305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002305
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS88925.1| chloroplast photosystem I reaction center subunit...    60   1e-07
gb|AFS88924.1| chloroplast photosystem I reaction center subunit...    60   1e-07
gb|AEC11064.1| photosystem I reaction center V [Camellia sinensis]     60   1e-07
ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...    60   1e-07
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]    60   1e-07

>gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB
           Group] gi|421958217|gb|AFX72947.1| photosystem I
           reaction center subunit V-2 [Musa AB Group]
          Length = 160

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 220 AWGSIGHFVAYYILATSSNGYDPKFFG 140
           AWGSIGH VAYYILATSSNGYDPKFFG
Sbjct: 134 AWGSIGHIVAYYILATSSNGYDPKFFG 160


>gb|AFS88924.1| chloroplast photosystem I reaction center subunit V-1 [Musa AB
           Group] gi|421958219|gb|AFX72948.1| photosystem I
           reaction center subunit V-1 [Musa AB Group]
          Length = 150

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 220 AWGSIGHFVAYYILATSSNGYDPKFFG 140
           AWGSIGH VAYYILATSSNGYDPKFFG
Sbjct: 124 AWGSIGHIVAYYILATSSNGYDPKFFG 150


>gb|AEC11064.1| photosystem I reaction center V [Camellia sinensis]
          Length = 163

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 220 AWGSIGHFVAYYILATSSNGYDPKFFG 140
           AWGSIGH VAYYILATSSNGYDPKFFG
Sbjct: 137 AWGSIGHIVAYYILATSSNGYDPKFFG 163


>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 220 AWGSIGHFVAYYILATSSNGYDPKFFG 140
           AWGSIGH VAYYILATSSNGYDPKFFG
Sbjct: 168 AWGSIGHIVAYYILATSSNGYDPKFFG 194


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 220 AWGSIGHFVAYYILATSSNGYDPKFFG 140
           AWGSIGH VAYYILATSSNGYDPKFFG
Sbjct: 135 AWGSIGHIVAYYILATSSNGYDPKFFG 161


Top