BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002304
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB73306.1| alternative oxidase [Gossypium hirsutum]               494   e-137
gb|AEB00555.1| mitochondrial alternative oxidase 1a [Brassica ju...   493   e-137
gb|ABJ98721.1| alternative oxidase [Gossypium hirsutum]               491   e-136
ref|XP_002317754.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
gb|ACE95101.1| mitochondrial alternative oxidase precursor [Citr...   490   e-136

>gb|ABB73306.1| alternative oxidase [Gossypium hirsutum]
          Length = 330

 Score =  494 bits (1271), Expect = e-137
 Identities = 236/318 (74%), Positives = 266/318 (83%), Gaps = 5/318 (1%)
 Frame = -1

Query: 1355 SLLKRRLFSTTATVSVRTMVLAKGGHTGLALRYGSSLAY-----KESAAAVRANTTGSSE 1191
            +++  R FST AT  V +  + K    GL +R  SS+A      KE          G S 
Sbjct: 15   TMVSPRFFSTAATRGVLSNDMVKAPAVGLGVRCRSSMAAIAGGDKEQEKKQAVGGGGGSS 74

Query: 1190 KKGDDDAIASYWGVGPSKVTKEDGTEWRWHCFRPWEAYKADTSIDLKKHHAPTTLMDKIA 1011
            K  DD  I SYWG+ P+KV+KEDG+ W+W CFRPW+ Y+AD SIDLKKHHAP T++DK+A
Sbjct: 75   K--DDKEIVSYWGLDPTKVSKEDGSPWKWTCFRPWDTYQADLSIDLKKHHAPVTVLDKMA 132

Query: 1010 FWTVKSLRYPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRQFQHSGGWIKALL 831
            +WTVKSLR+PTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLR+F+HSGGWIKALL
Sbjct: 133  YWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALL 192

Query: 830  EEAENERMHLMTFMEVANPKWYERALVFTVQGVFFNAYFLAYLVSPKFAHRVVGYLEEEA 651
            EEAENERMHLMTFMEV++P+WYERALVF VQGVFFNAYFL Y++SPKFAHRVVGYLEEEA
Sbjct: 193  EEAENERMHLMTFMEVSDPRWYERALVFAVQGVFFNAYFLGYIISPKFAHRVVGYLEEEA 252

Query: 650  IHSYTEFLKELDKGNIENVPAPAIAIDYWRLPPNSTLRDVVMVVRADEAHHRDVNHFASD 471
            IHSYTEFLKELD GNIENVPAP IAIDYWRLPPNSTLRDVV+ VRADEAHHRDVNHFASD
Sbjct: 253  IHSYTEFLKELDNGNIENVPAPPIAIDYWRLPPNSTLRDVVLAVRADEAHHRDVNHFASD 312

Query: 470  IHYQGHELREAPAPVGYH 417
            IHYQG +L+EAPAP+GYH
Sbjct: 313  IHYQGRQLKEAPAPLGYH 330


>gb|AEB00555.1| mitochondrial alternative oxidase 1a [Brassica juncea]
          Length = 360

 Score =  493 bits (1268), Expect = e-137
 Identities = 245/356 (68%), Positives = 275/356 (77%), Gaps = 36/356 (10%)
 Frame = -1

Query: 1376 GGKVMAGSLLKR---RLFSTTATVSVRTM--------------VLAKGGHTGL------- 1269
            GG  +A SLLK    RLFST  T ++R++              + +  G +G        
Sbjct: 5    GGAKVASSLLKAARPRLFSTATTSTIRSISHETSHLLRPAVADLASPSGMSGWIWTTRAP 64

Query: 1268 ---ALRYGSSLAYKESAAAVRAN---------TTGSSEKKGDDDAIASYWGVGPSKVTKE 1125
                +R+ S++   E      AN         T G +        IASYWGV PSK+TKE
Sbjct: 65   AMGGVRFASTVTLGEKTTTTDANPKKAENESSTGGDAGGNKGGKGIASYWGVEPSKITKE 124

Query: 1124 DGTEWRWHCFRPWEAYKADTSIDLKKHHAPTTLMDKIAFWTVKSLRYPTDLFFQRRYGCR 945
            DGTEW+W+CFRPWE YKAD +IDL KHH PTT +D++A+WTVKSLR+PTDLFFQRRYGCR
Sbjct: 125  DGTEWKWNCFRPWETYKADLTIDLSKHHVPTTFLDRLAYWTVKSLRWPTDLFFQRRYGCR 184

Query: 944  AMMLETVAAVPGMVGGMLLHCKSLRQFQHSGGWIKALLEEAENERMHLMTFMEVANPKWY 765
            AMMLETVAAVPGMVGGMLLHCKSLR+F+ SGGWIKALLEEAENERMHLMTFMEVA PKWY
Sbjct: 185  AMMLETVAAVPGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWY 244

Query: 764  ERALVFTVQGVFFNAYFLAYLVSPKFAHRVVGYLEEEAIHSYTEFLKELDKGNIENVPAP 585
            ERALV TVQGVFFNAYFL YL+SPKFAHR+VGYLEEEAIHSYTEFLKELDKGNIENVPAP
Sbjct: 245  ERALVITVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAP 304

Query: 584  AIAIDYWRLPPNSTLRDVVMVVRADEAHHRDVNHFASDIHYQGHELREAPAPVGYH 417
            AIAIDYWRLP ++TLRDVVMVVRADEAHHRDVNHFASDIHYQG EL+EAPAP+GYH
Sbjct: 305  AIAIDYWRLPADATLRDVVMVVRADEAHHRDVNHFASDIHYQGRELKEAPAPIGYH 360


>gb|ABJ98721.1| alternative oxidase [Gossypium hirsutum]
          Length = 331

 Score =  491 bits (1264), Expect = e-136
 Identities = 235/318 (73%), Positives = 266/318 (83%), Gaps = 5/318 (1%)
 Frame = -1

Query: 1355 SLLKRRLFSTTATVSVRTMVLAKGGHTGLALRYGSSLAY-----KESAAAVRANTTGSSE 1191
            +++  R FST AT  V +  + K    GL +R  SS+A      KE          G S 
Sbjct: 16   TMVSPRFFSTAATRGVLSNDMVKAPAVGLGVRCRSSMAAIGGGDKEQEKKQAVGGGGGSA 75

Query: 1190 KKGDDDAIASYWGVGPSKVTKEDGTEWRWHCFRPWEAYKADTSIDLKKHHAPTTLMDKIA 1011
            K  DD  I SYWG+ P+KV+KEDG+ W+W CFRPW+ Y+AD SIDLKKHHAP T++DK+A
Sbjct: 76   K--DDKEIVSYWGLDPTKVSKEDGSPWKWTCFRPWDTYRADLSIDLKKHHAPVTVLDKMA 133

Query: 1010 FWTVKSLRYPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRQFQHSGGWIKALL 831
            +WTVKSLR+PTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLR+F+HSGGWIKALL
Sbjct: 134  YWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALL 193

Query: 830  EEAENERMHLMTFMEVANPKWYERALVFTVQGVFFNAYFLAYLVSPKFAHRVVGYLEEEA 651
            EEAENERMHLMTFMEV++P+WYERALVF+VQGVFFNAYFL Y++SPKFAHRVVGYLEEEA
Sbjct: 194  EEAENERMHLMTFMEVSDPRWYERALVFSVQGVFFNAYFLGYIISPKFAHRVVGYLEEEA 253

Query: 650  IHSYTEFLKELDKGNIENVPAPAIAIDYWRLPPNSTLRDVVMVVRADEAHHRDVNHFASD 471
            IHSYTEFLKELD GNIENVPAP IAIDYWRL PNSTLRDVV+ VRADEAHHRDVNHFASD
Sbjct: 254  IHSYTEFLKELDNGNIENVPAPPIAIDYWRLSPNSTLRDVVLAVRADEAHHRDVNHFASD 313

Query: 470  IHYQGHELREAPAPVGYH 417
            IHYQG +L+EAPAP+GYH
Sbjct: 314  IHYQGRQLKEAPAPLGYH 331


>ref|XP_002317754.1| predicted protein [Populus trichocarpa] gi|222858427|gb|EEE95974.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  491 bits (1263), Expect = e-136
 Identities = 230/288 (79%), Positives = 254/288 (88%), Gaps = 5/288 (1%)
 Frame = -1

Query: 1265 LRYGSSLAY-----KESAAAVRANTTGSSEKKGDDDAIASYWGVGPSKVTKEDGTEWRWH 1101
            LR+GS+ +Y     ++             +K  + +AI SYWGV PS+VTKEDGTEW+W+
Sbjct: 49   LRHGSTASYSGKDQQQEEVKHSQPVAEGGDKAEEKNAIVSYWGVPPSRVTKEDGTEWKWN 108

Query: 1100 CFRPWEAYKADTSIDLKKHHAPTTLMDKIAFWTVKSLRYPTDLFFQRRYGCRAMMLETVA 921
            CFRPWE Y AD SI+L KHHAP T +DK+A+WTVKSLR+PTDLFFQRRYGCRAMMLETVA
Sbjct: 109  CFRPWETYSADLSINLTKHHAPVTFLDKMAYWTVKSLRWPTDLFFQRRYGCRAMMLETVA 168

Query: 920  AVPGMVGGMLLHCKSLRQFQHSGGWIKALLEEAENERMHLMTFMEVANPKWYERALVFTV 741
            AVPGMVGGMLLHCKSLR+F+HSGGWIKALLEEAENERMHLMTFMEVANP+WYERALV TV
Sbjct: 169  AVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVANPRWYERALVITV 228

Query: 740  QGVFFNAYFLAYLVSPKFAHRVVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWR 561
            QGVFFNAYFL YL+SPKFAHR+VGYLEEEAIHSYTEFLKELDKGNI+NVPAPAIAIDYWR
Sbjct: 229  QGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIKNVPAPAIAIDYWR 288

Query: 560  LPPNSTLRDVVMVVRADEAHHRDVNHFASDIHYQGHELREAPAPVGYH 417
            LPPNSTLRDVV VVRADEAHHRDVNHFASDIHYQG EL+EAPAP+GYH
Sbjct: 289  LPPNSTLRDVVEVVRADEAHHRDVNHFASDIHYQGRELKEAPAPIGYH 336


>gb|ACE95101.1| mitochondrial alternative oxidase precursor [Citrus sinensis]
          Length = 336

 Score =  490 bits (1261), Expect = e-136
 Identities = 234/302 (77%), Positives = 256/302 (84%)
 Frame = -1

Query: 1322 ATVSVRTMVLAKGGHTGLALRYGSSLAYKESAAAVRANTTGSSEKKGDDDAIASYWGVGP 1143
            +T  VR  +L     + LAL        +E+     A   G S  K D+  I SYWGV  
Sbjct: 36   STFLVRAPILGSRNRSTLALGGEKEQQREENVQTTGAAAAGGSGNK-DEKRIVSYWGVEA 94

Query: 1142 SKVTKEDGTEWRWHCFRPWEAYKADTSIDLKKHHAPTTLMDKIAFWTVKSLRYPTDLFFQ 963
             KV K+DG+EW+W+CFRPWEAY+AD SIDLKKHHAPTT  DK+A WTVKSLR+PTDLFFQ
Sbjct: 95   PKVNKDDGSEWKWNCFRPWEAYEADLSIDLKKHHAPTTFSDKMALWTVKSLRWPTDLFFQ 154

Query: 962  RRYGCRAMMLETVAAVPGMVGGMLLHCKSLRQFQHSGGWIKALLEEAENERMHLMTFMEV 783
            RRYGCRAMMLETVAAVPGMVGGMLLHCKSLR+F+HSGGWIKALLEEAENERMHLMTFMEV
Sbjct: 155  RRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEV 214

Query: 782  ANPKWYERALVFTVQGVFFNAYFLAYLVSPKFAHRVVGYLEEEAIHSYTEFLKELDKGNI 603
            A PKWYERALVF VQGVFFNAYFL YL+SPKFAHR+VGYLEEEAIHSYTEFLKELDKGNI
Sbjct: 215  AKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNI 274

Query: 602  ENVPAPAIAIDYWRLPPNSTLRDVVMVVRADEAHHRDVNHFASDIHYQGHELREAPAPVG 423
            ENVPAPAIA DYWRLPPNSTL+DVV+VVRADEAHHRDVNHFASDIHYQG +LRE+PAP+G
Sbjct: 275  ENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHFASDIHYQGRQLRESPAPLG 334

Query: 422  YH 417
            YH
Sbjct: 335  YH 336