BLASTX nr result

ID: Cimicifuga21_contig00002287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002287
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25584.3| unnamed protein product [Vitis vinifera]              233   3e-59
ref|XP_002528830.1| 60S ribosomal protein L14, putative [Ricinus...   233   3e-59
emb|CBI23666.3| unnamed protein product [Vitis vinifera]              232   6e-59
ref|XP_002312586.1| predicted protein [Populus trichocarpa] gi|2...   232   6e-59
ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like ...   231   8e-59

>emb|CBI25584.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score =  233 bits (594), Expect = 3e-59
 Identities = 116/126 (92%), Positives = 121/126 (96%)
 Frame = +2

Query: 119 SKMPFKRYVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDI 298
           +KMPFKRYVEIGRVALVNYGK+YGRLVVIVDVIDQNRALVDAPDMVR QMNFKRLSLTDI
Sbjct: 44  AKMPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDI 103

Query: 299 KIDINRVPKKKSLVEAMEAADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRG 478
           KIDI RVPKKK+L+EAM AADVKNKWE SSWGRKLIVQKRRASLNDFDRFK+MLAKIKRG
Sbjct: 104 KIDIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRG 163

Query: 479 GAIRQE 496
           G IRQE
Sbjct: 164 GVIRQE 169


>ref|XP_002528830.1| 60S ribosomal protein L14, putative [Ricinus communis]
           gi|223531742|gb|EEF33564.1| 60S ribosomal protein L14,
           putative [Ricinus communis]
          Length = 134

 Score =  233 bits (594), Expect = 3e-59
 Identities = 116/124 (93%), Positives = 120/124 (96%)
 Frame = +2

Query: 125 MPFKRYVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 304
           MPFKRYVEIGRVALVNYGKDYG+LVVIVDVIDQNRALVDAPDMVRSQMNFKRL LTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGKDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLQLTDIKI 60

Query: 305 DINRVPKKKSLVEAMEAADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRGGA 484
           DINRVPKKK+L+EAME ADVKNKWE SSWGRKLIVQKRRA+LNDFDRFKLMLAKIKRGG 
Sbjct: 61  DINRVPKKKNLIEAMEKADVKNKWESSSWGRKLIVQKRRAALNDFDRFKLMLAKIKRGGL 120

Query: 485 IRQE 496
           IRQE
Sbjct: 121 IRQE 124


>emb|CBI23666.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  232 bits (591), Expect = 6e-59
 Identities = 115/126 (91%), Positives = 120/126 (95%)
 Frame = +2

Query: 119 SKMPFKRYVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDI 298
           + MPFKRYVE+GRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVR QMNFKRLSLTDI
Sbjct: 85  ANMPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDI 144

Query: 299 KIDINRVPKKKSLVEAMEAADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRG 478
           KIDI RVPKKK+L+EAM AADVKNKWE SSWGRKLIVQKRRASLNDFDRFK+MLAKIKRG
Sbjct: 145 KIDIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRG 204

Query: 479 GAIRQE 496
           G IRQE
Sbjct: 205 GVIRQE 210


>ref|XP_002312586.1| predicted protein [Populus trichocarpa] gi|222852406|gb|EEE89953.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  232 bits (591), Expect = 6e-59
 Identities = 115/124 (92%), Positives = 122/124 (98%)
 Frame = +2

Query: 125 MPFKRYVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 304
           MPFKRYVEIGRVALVNYGK+YGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 305 DINRVPKKKSLVEAMEAADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRGGA 484
           +INRVPKKK+L+EAME ADVKNKWEKSSWGR+LIVQ+RRA+LNDFDRFKLMLAKIKRGG 
Sbjct: 61  EINRVPKKKALIEAMEKADVKNKWEKSSWGRRLIVQQRRAALNDFDRFKLMLAKIKRGGL 120

Query: 485 IRQE 496
           IRQE
Sbjct: 121 IRQE 124


>ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera]
          Length = 134

 Score =  231 bits (590), Expect = 8e-59
 Identities = 115/124 (92%), Positives = 119/124 (95%)
 Frame = +2

Query: 125 MPFKRYVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 304
           MPFKRYVE+GRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVR QMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60

Query: 305 DINRVPKKKSLVEAMEAADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRGGA 484
           DI RVPKKK+L+EAM AADVKNKWE SSWGRKLIVQKRRASLNDFDRFK+MLAKIKRGG 
Sbjct: 61  DIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120

Query: 485 IRQE 496
           IRQE
Sbjct: 121 IRQE 124


Top