BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002283
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   487   e-153
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              487   e-153
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   439   e-137
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   419   e-131
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...   411   e-127

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  487 bits (1253), Expect(2) = e-153
 Identities = 256/365 (70%), Positives = 275/365 (75%), Gaps = 2/365 (0%)
 Frame = +3

Query: 210  VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQPLRGVPVMVKPSEAEKNLVQXX 389
            VRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAIALSGQPL G PVMVKPSEAEKNLVQ  
Sbjct: 245  VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST 304

Query: 390  XXXXXXXXXXXXXXXXX-RRLYVGNLHFNITEDQLRQVFEPFGPVELVQLPLD-DTGHCK 563
                              RRLYVGNLHFNITEDQLRQVFEPFG VELVQLP D +TGHCK
Sbjct: 305  TAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCK 364

Query: 564  GFGFVQFARLEDAIAAQNLNGQLEIVGRTIKVSAVSDQVGMQEIGINAXXXXXXXXXXLS 743
            GFGFVQFARLEDA AAQ+LNGQL+I GRTIKVS V+DQ G+Q+IG NA          LS
Sbjct: 365  GFGFVQFARLEDARAAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEGGGLS 424

Query: 744  LNARSRAILMQKLDRXXXXXXXXXXXXXPVLNGASLPLGTGPVLGVTPAVSSLVAPFGQT 923
            LNARSRAILMQKLDR             PVLN   LPL T P+LG  P VS LVAP  Q 
Sbjct: 425  LNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQA 484

Query: 924  TXXXXXXXXXXXXTVPTVTASGIDFIGVPSECLLLKNMFDPNSETEPDFDLDIKDDVQDE 1103
                          VP VT   ID IGVPSECL+LKNMFDP  ETEPDFDLDIK+DVQDE
Sbjct: 485  PVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDE 544

Query: 1104 CSKFGAVKHIFVDKNSGGFVYLRFDSIQSAMSAQRALHGRWFAGKMIEATYMLPQNYEAQ 1283
            CSKFG VKHI+VDKNS GFV+LRF++ Q+A+SAQRALHGRWFAGKMI AT+MLPQNYEA+
Sbjct: 545  CSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAK 604

Query: 1284 FPDSK 1298
            FPDS+
Sbjct: 605  FPDSR 609



 Score = 82.4 bits (202), Expect(2) = e-153
 Identities = 40/43 (93%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = +2

Query: 2   RYKEKKEEV-EPEADPERDQRTVFAYQICLKADERDVYEFFSR 127
           R+K+KKEEV EPEADPERDQRTVFAYQICLKADERDVYEFFSR
Sbjct: 199 RHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSR 241


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  487 bits (1253), Expect(2) = e-153
 Identities = 256/365 (70%), Positives = 275/365 (75%), Gaps = 2/365 (0%)
 Frame = +3

Query: 210  VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQPLRGVPVMVKPSEAEKNLVQXX 389
            VRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAIALSGQPL G PVMVKPSEAEKNLVQ  
Sbjct: 63   VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST 122

Query: 390  XXXXXXXXXXXXXXXXX-RRLYVGNLHFNITEDQLRQVFEPFGPVELVQLPLD-DTGHCK 563
                              RRLYVGNLHFNITEDQLRQVFEPFG VELVQLP D +TGHCK
Sbjct: 123  TAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCK 182

Query: 564  GFGFVQFARLEDAIAAQNLNGQLEIVGRTIKVSAVSDQVGMQEIGINAXXXXXXXXXXLS 743
            GFGFVQFARLEDA AAQ+LNGQL+I GRTIKVS V+DQ G+Q+IG NA          LS
Sbjct: 183  GFGFVQFARLEDARAAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEGGGLS 242

Query: 744  LNARSRAILMQKLDRXXXXXXXXXXXXXPVLNGASLPLGTGPVLGVTPAVSSLVAPFGQT 923
            LNARSRAILMQKLDR             PVLN   LPL T P+LG  P VS LVAP  Q 
Sbjct: 243  LNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQA 302

Query: 924  TXXXXXXXXXXXXTVPTVTASGIDFIGVPSECLLLKNMFDPNSETEPDFDLDIKDDVQDE 1103
                          VP VT   ID IGVPSECL+LKNMFDP  ETEPDFDLDIK+DVQDE
Sbjct: 303  PVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDE 362

Query: 1104 CSKFGAVKHIFVDKNSGGFVYLRFDSIQSAMSAQRALHGRWFAGKMIEATYMLPQNYEAQ 1283
            CSKFG VKHI+VDKNS GFV+LRF++ Q+A+SAQRALHGRWFAGKMI AT+MLPQNYEA+
Sbjct: 363  CSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAK 422

Query: 1284 FPDSK 1298
            FPDS+
Sbjct: 423  FPDSR 427



 Score = 82.4 bits (202), Expect(2) = e-153
 Identities = 40/43 (93%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = +2

Query: 2   RYKEKKEEV-EPEADPERDQRTVFAYQICLKADERDVYEFFSR 127
           R+K+KKEEV EPEADPERDQRTVFAYQICLKADERDVYEFFSR
Sbjct: 17  RHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSR 59


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
            gi|223544486|gb|EEF46005.1| splicing factor, putative
            [Ricinus communis]
          Length = 609

 Score =  439 bits (1128), Expect(2) = e-137
 Identities = 236/363 (65%), Positives = 262/363 (72%)
 Frame = +3

Query: 210  VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQPLRGVPVMVKPSEAEKNLVQXX 389
            VRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQPL G PVMVKPSEAEKNLVQ  
Sbjct: 252  VRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST 311

Query: 390  XXXXXXXXXXXXXXXXXRRLYVGNLHFNITEDQLRQVFEPFGPVELVQLPLDDTGHCKGF 569
                             RRLYVGNLHFNITEDQLRQVFEPFG VELVQLPLD+TGHCKGF
Sbjct: 312  TTVNAGSGPYSGGA---RRLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLDETGHCKGF 368

Query: 570  GFVQFARLEDAIAAQNLNGQLEIVGRTIKVSAVSDQVGMQEIGINAXXXXXXXXXXLSLN 749
            GFVQFARLEDA  A NLNGQ+EI GR IKVS V+DQ GMQ+   NA          L+LN
Sbjct: 369  GFVQFARLEDAKNALNLNGQVEIAGRPIKVSTVTDQTGMQDSTTNAGDFDDDEGGGLALN 428

Query: 750  ARSRAILMQKLDRXXXXXXXXXXXXXPVLNGASLPLGTGPVLGVTPAVSSLVAPFGQTTX 929
            ARSRAILMQKLDR                +   L + T P+LG  P +  +VAP    + 
Sbjct: 429  ARSRAILMQKLDRSGTASSIAGSLGTSAAS-TGLAVPTAPILGAAPVIPPIVAPLISGSA 487

Query: 930  XXXXXXXXXXXTVPTVTASGIDFIGVPSECLLLKNMFDPNSETEPDFDLDIKDDVQDECS 1109
                        +P    S +D IGVPSECLLLKNMFDP+ ETEPDFDLDIK+DVQ ECS
Sbjct: 488  PAFPGLPGASVQLPGAIPS-VDTIGVPSECLLLKNMFDPSIETEPDFDLDIKEDVQLECS 546

Query: 1110 KFGAVKHIFVDKNSGGFVYLRFDSIQSAMSAQRALHGRWFAGKMIEATYMLPQNYEAQFP 1289
            KFG ++HI+VDKNS GFVYLRF++ QSA+SAQRALHGRWFAGKMI AT+M+PQ YE +FP
Sbjct: 547  KFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMVPQVYETKFP 606

Query: 1290 DSK 1298
            DS+
Sbjct: 607  DSR 609



 Score = 79.3 bits (194), Expect(2) = e-137
 Identities = 39/41 (95%), Positives = 39/41 (95%), Gaps = 1/41 (2%)
 Frame = +2

Query: 8   KEKKEEV-EPEADPERDQRTVFAYQICLKADERDVYEFFSR 127
           KEKKEE  EPEADPERDQRTVFAYQICLKADERDVYEFFSR
Sbjct: 208 KEKKEEAAEPEADPERDQRTVFAYQICLKADERDVYEFFSR 248


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  419 bits (1078), Expect(2) = e-131
 Identities = 231/365 (63%), Positives = 258/365 (70%), Gaps = 2/365 (0%)
 Frame = +3

Query: 210  VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQPLRGVPVMVKPSEAEKNLVQXX 389
            VRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQPL G PVMVKPSEAEKNLVQ  
Sbjct: 249  VRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST 308

Query: 390  XXXXXXXXXXXXXXXXX-RRLYVGNLHFNITEDQLRQVFEPFGPVELVQLPLDDTGHCKG 566
                              R+LYVGNLH +ITE  +R+VFE FG VELVQLPLD++GHCKG
Sbjct: 309  TSVANGLTGLIGPYSGGARKLYVGNLHVSITEADIRRVFEAFGQVELVQLPLDESGHCKG 368

Query: 567  FGFVQFARLEDAIAAQNLNGQLEIVGRTIKVSAVSDQVGMQEIGINAXXXXXXXXXXLSL 746
            FGFVQFARLEDA  AQ+LNGQLEI GRTIKVSAV+DQ GMQE+G N           LSL
Sbjct: 369  FGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEVGGNTGDFDDDEGGGLSL 428

Query: 747  NARSRAILMQKLDRXXXXXXXXXXXXXPVLNGASLPL-GTGPVLGVTPAVSSLVAPFGQT 923
            NA SRAILMQKLDR               +N   L L  TG +L   P V  L     Q 
Sbjct: 429  NACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILAAAP-VGGLAGGGLQ- 486

Query: 924  TXXXXXXXXXXXXTVPTVTASGIDFIGVPSECLLLKNMFDPNSETEPDFDLDIKDDVQDE 1103
                          +PT T   ID IGVPSECL+LKNMFDP  ETEPDFDLDIK+DV+ E
Sbjct: 487  --------------IPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAE 532

Query: 1104 CSKFGAVKHIFVDKNSGGFVYLRFDSIQSAMSAQRALHGRWFAGKMIEATYMLPQNYEAQ 1283
            CSKFGA+KHI+VDK S GFVYLRF+  QSA+SAQ+ALHGRWFAGKMI A++M+PQ+YE +
Sbjct: 533  CSKFGALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDK 592

Query: 1284 FPDSK 1298
            FPDS+
Sbjct: 593  FPDSR 597



 Score = 78.2 bits (191), Expect(2) = e-131
 Identities = 39/43 (90%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = +2

Query: 2   RYKEKKEEV-EPEADPERDQRTVFAYQICLKADERDVYEFFSR 127
           R+KEKKEE  EPEADPERDQRTVFAYQI LKADERDVYEFFSR
Sbjct: 203 RHKEKKEEATEPEADPERDQRTVFAYQISLKADERDVYEFFSR 245


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score =  411 bits (1057), Expect(2) = e-127
 Identities = 225/365 (61%), Positives = 254/365 (69%), Gaps = 2/365 (0%)
 Frame = +3

Query: 210  VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQPLRGVPVMVKPSEAEKNLVQXX 389
            VRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQPL G PVMVKPSEAEKNLVQ  
Sbjct: 252  VRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQST 311

Query: 390  XXXXXXXXXXXXXXXXX-RRLYVGNLHFNITEDQLRQVFEPFGPVELVQLPLDDTGHCKG 566
                              R+LYVGNLH +ITE  +R+VFE FG VELVQLPLD++GHCKG
Sbjct: 312  TSVANGLTGLIGPYSGGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLDESGHCKG 371

Query: 567  FGFVQFARLEDAIAAQNLNGQLEIVGRTIKVSAVSDQVGMQEIGINAXXXXXXXXXXLSL 746
            FGFVQFARLEDA  AQ+LNGQLEI GRTIKVSAV+DQ GMQE G N           +SL
Sbjct: 372  FGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEFGGNTGDFDDDEGGGMSL 431

Query: 747  NARSRAILMQKLDRXXXXXXXXXXXXXPVLNGASLPL-GTGPVLGVTPAVSSLVAPFGQT 923
            NA SRA+LMQKLDR              V+N   L L  TG +L          AP G+ 
Sbjct: 432  NACSRAMLMQKLDRSGTASSMVGSLGNSVVNNTGLNLPATGNILAA--------APVGEL 483

Query: 924  TXXXXXXXXXXXXTVPTVTASGIDFIGVPSECLLLKNMFDPNSETEPDFDLDIKDDVQDE 1103
                          +PT T   ID IGV SECL+LKNMFDP  E EPDFDLDIK+DV+ E
Sbjct: 484  AGGGLQ--------IPTATIPSIDTIGVASECLMLKNMFDPKDEIEPDFDLDIKEDVEAE 535

Query: 1104 CSKFGAVKHIFVDKNSGGFVYLRFDSIQSAMSAQRALHGRWFAGKMIEATYMLPQNYEAQ 1283
            CSK G +KHI+VDK S GFVYLRF+  QSA+SAQ+ALHGRWFAGKMI A++M+PQ+YE +
Sbjct: 536  CSKLGTLKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDK 595

Query: 1284 FPDSK 1298
            FPDS+
Sbjct: 596  FPDSR 600



 Score = 71.6 bits (174), Expect(2) = e-127
 Identities = 34/42 (80%), Positives = 36/42 (85%)
 Frame = +2

Query: 2   RYKEKKEEVEPEADPERDQRTVFAYQICLKADERDVYEFFSR 127
           R+KEKKEE    ADPERDQR VFAYQI LKADERDV+EFFSR
Sbjct: 207 RHKEKKEETTEPADPERDQRAVFAYQISLKADERDVFEFFSR 248