BLASTX nr result
ID: Cimicifuga21_contig00002271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00002271
(2161 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig... 763 0.0
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera] 756 0.0
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu... 736 0.0
ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|2... 724 0.0
ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|2... 719 0.0
>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
product [Vitis vinifera]
Length = 492
Score = 763 bits (1970), Expect = 0.0
Identities = 370/490 (75%), Positives = 409/490 (83%)
Frame = +2
Query: 434 MADRSRSIFIDELPSHLLIEILTSGRLSGTDLACLEQTCQVFRENHGLFPQNFRSLIDFV 613
MA+R S+ +ELPSHL++EIL+SGRLS DL CLE T + F +HGL+P FRSL+DF
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60
Query: 614 AFQLCGLHPIYGPLPSNARKALFDRCGGNWKRMLRFLQSVEQSSDLVETASGNKMQITTG 793
AFQLCG HPIY L NA+K LFDRCG NWKR+LRFLQSVEQSS + ET++GN MQITTG
Sbjct: 61 AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGN-MQITTG 119
Query: 794 RYHTLLISDSSVYSCGSSLCGVLGHGPETTQSVSFNRINFPXXXXXXXXXXXXNHAAFVM 973
RYHTLLI DSSVYSCGSSLCGVLGHGPETTQ V+F+RINFP NHAAFVM
Sbjct: 120 RYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVM 179
Query: 974 QSGEVFTCGDNSSFCCGHGEVERAIFRPRLVETLKGVSCKQVATGLSFTAFLTTQGHVYT 1153
QSGEVFTCGDNSSFCCGHG+ R IFRPRLVE LKGV CKQVA GLSFT FLT +GHVYT
Sbjct: 180 QSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYT 239
Query: 1154 CGTNAHGQLGHGDHVDRPTPKIVETLENIGHVVQIAAGPSYILAVMDDGTLYSFGSGTNF 1333
CGTN HGQLGHGD VDR TPKIVE LE +G VVQIAAGPSY +AV DDGT++SFGSG+NF
Sbjct: 240 CGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF 299
Query: 1334 CLGHGEQHNELQPRAILYFKRKNIHIVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 1513
CLGHGEQHNEL+PRAI F+RK IH+VR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGD 359
Query: 1514 EIDKTTPALLSSIKGQLVVQVCARKRKTFVLMENGSVFAFGWMGFGSLGFSDRGASDKVM 1693
EIDKTTP +LSS+K L VQVCARKRKTFVL++ GSV+ FGWMGFGSLGF DRGASDKVM
Sbjct: 360 EIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVM 419
Query: 1694 NPQILDDLRAHQVSQISTGLYHTVIVTNKGLIFGFGDNERAQLGHDSLRTCLKPTEINVE 1873
P ILD LR H +SQISTGLYHTV V NKG IFGFGDNERAQLGHD+LR C PTEI V+
Sbjct: 420 RPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFVQ 479
Query: 1874 ETLDEPGLVA 1903
E D+ G V+
Sbjct: 480 EATDDAGRVS 489
>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
Length = 511
Score = 756 bits (1951), Expect = 0.0
Identities = 367/485 (75%), Positives = 404/485 (83%)
Frame = +2
Query: 434 MADRSRSIFIDELPSHLLIEILTSGRLSGTDLACLEQTCQVFRENHGLFPQNFRSLIDFV 613
MA+R S+ +ELPSHL++EIL+SGRLS DL CLE T + F +HGL+P FRSL+DF
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60
Query: 614 AFQLCGLHPIYGPLPSNARKALFDRCGGNWKRMLRFLQSVEQSSDLVETASGNKMQITTG 793
AFQLCG HPIY L NA+K LFDRCG NWKR+LRFLQSVEQSS + ET++GN MQITTG
Sbjct: 61 AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGN-MQITTG 119
Query: 794 RYHTLLISDSSVYSCGSSLCGVLGHGPETTQSVSFNRINFPXXXXXXXXXXXXNHAAFVM 973
RYHTLLI DSSVYSCGSSLCGVLGHGPETTQ V+F+RINFP NHAAFVM
Sbjct: 120 RYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVM 179
Query: 974 QSGEVFTCGDNSSFCCGHGEVERAIFRPRLVETLKGVSCKQVATGLSFTAFLTTQGHVYT 1153
QSGEVFTCGDNSSFCCGHG+ R IFRPRLVE LKGV CKQVA GLSFT FLT +GHVYT
Sbjct: 180 QSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYT 239
Query: 1154 CGTNAHGQLGHGDHVDRPTPKIVETLENIGHVVQIAAGPSYILAVMDDGTLYSFGSGTNF 1333
CGTN HGQLGHGD VDR TPKIVE LE +G VVQIAAGPSY +AV DDGT++SFGSG+NF
Sbjct: 240 CGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF 299
Query: 1334 CLGHGEQHNELQPRAILYFKRKNIHIVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 1513
CLGHGEQHNEL+PRAI F+RK IH+VR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGD 359
Query: 1514 EIDKTTPALLSSIKGQLVVQVCARKRKTFVLMENGSVFAFGWMGFGSLGFSDRGASDKVM 1693
EIDKTTP +LSS+K L VQVCARKRKTFVL++ GSV+ FGWMGFGSLGF DRGASDKVM
Sbjct: 360 EIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVM 419
Query: 1694 NPQILDDLRAHQVSQISTGLYHTVIVTNKGLIFGFGDNERAQLGHDSLRTCLKPTEINVE 1873
P ILD LR H +SQISTGLYHTV V NKG IFGFGDNERAQLGHD+LR C PTEI
Sbjct: 420 RPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFAS 479
Query: 1874 ETLDE 1888
T+ E
Sbjct: 480 PTVAE 484
>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 497
Score = 736 bits (1901), Expect = 0.0
Identities = 350/490 (71%), Positives = 404/490 (82%)
Frame = +2
Query: 434 MADRSRSIFIDELPSHLLIEILTSGRLSGTDLACLEQTCQVFRENHGLFPQNFRSLIDFV 613
MAD+ R + IDELPSHL++EIL +GRLS TDL CLE T + F +HGL+P F+SL+DF
Sbjct: 1 MADKYRLVSIDELPSHLILEILMTGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFA 60
Query: 614 AFQLCGLHPIYGPLPSNARKALFDRCGGNWKRMLRFLQSVEQSSDLVETASGNKMQITTG 793
AFQLC H +Y + NA+K L DRCGGNWKR+LRFL +VE+SS +VET++GN MQITTG
Sbjct: 61 AFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGN-MQITTG 119
Query: 794 RYHTLLISDSSVYSCGSSLCGVLGHGPETTQSVSFNRINFPXXXXXXXXXXXXNHAAFVM 973
RYHTLLIS+SSVYSCGSSLCGVLGHGPETTQ VSF+RI FP NHAA+++
Sbjct: 120 RYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYIL 179
Query: 974 QSGEVFTCGDNSSFCCGHGEVERAIFRPRLVETLKGVSCKQVATGLSFTAFLTTQGHVYT 1153
+SGEVFTCGDNSSFCCGH + R IFRPR VE LKGV CKQVA GL+FT FLT GHVY+
Sbjct: 180 ESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYS 239
Query: 1154 CGTNAHGQLGHGDHVDRPTPKIVETLENIGHVVQIAAGPSYILAVMDDGTLYSFGSGTNF 1333
CGTN HGQLGHGD +DRPTPKI+E+ E IG V QIAAGPSY+LAV D G +YSFGSG+NF
Sbjct: 240 CGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNF 299
Query: 1334 CLGHGEQHNELQPRAILYFKRKNIHIVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 1513
CLGHGEQHNE PRAI F+RKN+H+VRVSAGDEHVVALDSSG+VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGD 359
Query: 1514 EIDKTTPALLSSIKGQLVVQVCARKRKTFVLMENGSVFAFGWMGFGSLGFSDRGASDKVM 1693
EIDKT P L+S+K L VQVCARKRKTFVL++ G VF FGWMGFGSLGF DRG SDKVM
Sbjct: 360 EIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVM 419
Query: 1694 NPQILDDLRAHQVSQISTGLYHTVIVTNKGLIFGFGDNERAQLGHDSLRTCLKPTEINVE 1873
P+ILD LRAH+VSQISTGLYHTV VT++G +FGFGDNERAQLGHD+LR CL+PTEI ++
Sbjct: 420 RPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEIFLQ 479
Query: 1874 ETLDEPGLVA 1903
E + G+ +
Sbjct: 480 EFGHDTGITS 489
>ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|222859975|gb|EEE97522.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 724 bits (1870), Expect = 0.0
Identities = 344/479 (71%), Positives = 398/479 (83%)
Frame = +2
Query: 434 MADRSRSIFIDELPSHLLIEILTSGRLSGTDLACLEQTCQVFRENHGLFPQNFRSLIDFV 613
MAD++RS+ I++LPSHL+ EILT+GRLS DLACLE T + F +HGL+PQ FRSL+DF
Sbjct: 1 MADKNRSVSIEDLPSHLIFEILTTGRLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFA 60
Query: 614 AFQLCGLHPIYGPLPSNARKALFDRCGGNWKRMLRFLQSVEQSSDLVETASGNKMQITTG 793
A+QLC H +Y + NA+K LF RC GNWKR+LRFLQ+VE+SS +V+T++ N MQ+TTG
Sbjct: 61 AYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASN-MQVTTG 119
Query: 794 RYHTLLISDSSVYSCGSSLCGVLGHGPETTQSVSFNRINFPXXXXXXXXXXXXNHAAFVM 973
RYHTLLI DSSVYSCGSSLCGVLGHG ETTQ V+F RI FP NHAAFV+
Sbjct: 120 RYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVL 179
Query: 974 QSGEVFTCGDNSSFCCGHGEVERAIFRPRLVETLKGVSCKQVATGLSFTAFLTTQGHVYT 1153
QSGEVFTCGDNSSFCCGH + R IFRPRLVE LKGV CKQVA GL+FT FLT QG +YT
Sbjct: 180 QSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYT 239
Query: 1154 CGTNAHGQLGHGDHVDRPTPKIVETLENIGHVVQIAAGPSYILAVMDDGTLYSFGSGTNF 1333
CGTN HGQLGHGD DRPTPKI+E LE +G VVQIAAGPSY+LAV D+G +YSFGSG+N
Sbjct: 240 CGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNL 299
Query: 1334 CLGHGEQHNELQPRAILYFKRKNIHIVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 1513
CLGHGEQH+E +PRAI F+RK+IH+V VSAGDEH VALDSSG+VY+WGKGYCGALGHGD
Sbjct: 300 CLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGD 359
Query: 1514 EIDKTTPALLSSIKGQLVVQVCARKRKTFVLMENGSVFAFGWMGFGSLGFSDRGASDKVM 1693
EIDKT PAL++ +K L VQVCARKRKTFVL++ GSV+ FGWMGFGSLGF DRG SDKVM
Sbjct: 360 EIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVM 419
Query: 1694 NPQILDDLRAHQVSQISTGLYHTVIVTNKGLIFGFGDNERAQLGHDSLRTCLKPTEINV 1870
P++LD LRA VSQISTGLYHTV+VTN+G +FGFGDNERAQLGHD+LR CL+PTEI V
Sbjct: 420 RPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEIFV 478
>ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|222869773|gb|EEF06904.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 719 bits (1856), Expect = 0.0
Identities = 343/488 (70%), Positives = 402/488 (82%)
Frame = +2
Query: 434 MADRSRSIFIDELPSHLLIEILTSGRLSGTDLACLEQTCQVFRENHGLFPQNFRSLIDFV 613
MA+R R I++ PSHL+ EILT GRLS DL CLE T + F +HGL+PQ FRSL+DF
Sbjct: 1 MANRYRLASIEDFPSHLIFEILTIGRLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFA 60
Query: 614 AFQLCGLHPIYGPLPSNARKALFDRCGGNWKRMLRFLQSVEQSSDLVETASGNKMQITTG 793
A QLC H +YG + NA+K LFDRCGGNWKR+LRFLQ+VE+SS +V+T++ N MQ+TTG
Sbjct: 61 AHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSACN-MQVTTG 119
Query: 794 RYHTLLISDSSVYSCGSSLCGVLGHGPETTQSVSFNRINFPXXXXXXXXXXXXNHAAFVM 973
RYHTLLI DSSVYSCGSSLCGVLGHG ETTQ V+F RI FP NHAAFV+
Sbjct: 120 RYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVL 179
Query: 974 QSGEVFTCGDNSSFCCGHGEVERAIFRPRLVETLKGVSCKQVATGLSFTAFLTTQGHVYT 1153
QSGEVFTCGDNSSFCCGH + R IFRPRLVE LK VSCKQV+ GL+FT FLT QG +YT
Sbjct: 180 QSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYT 239
Query: 1154 CGTNAHGQLGHGDHVDRPTPKIVETLENIGHVVQIAAGPSYILAVMDDGTLYSFGSGTNF 1333
CG+N HGQLGHGD +DRPTPKI+E LE IG VVQIAAGPSY+LAV D+G +YSFG G+NF
Sbjct: 240 CGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNF 299
Query: 1334 CLGHGEQHNELQPRAILYFKRKNIHIVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 1513
CLGHGEQH+E QPRAI F+RK+IH+V VSAGDEH VALDSSG+VY+WGKGYCGALGHGD
Sbjct: 300 CLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGD 359
Query: 1514 EIDKTTPALLSSIKGQLVVQVCARKRKTFVLMENGSVFAFGWMGFGSLGFSDRGASDKVM 1693
EIDKT P+L++ +K +L VQ CARKRKTFVL+++GSV+ FG MGFGSLGF DR ++KVM
Sbjct: 360 EIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVM 419
Query: 1694 NPQILDDLRAHQVSQISTGLYHTVIVTNKGLIFGFGDNERAQLGHDSLRTCLKPTEINVE 1873
P++LD LRAH+VSQISTGLYHTV+VTN+G +FGFGDNER QLGHD+LR CL+PTEI V+
Sbjct: 420 TPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIFVQ 479
Query: 1874 ETLDEPGL 1897
ET D+ GL
Sbjct: 480 ETADDTGL 487