BLASTX nr result

ID: Cimicifuga21_contig00002252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002252
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
ref|XP_002533475.1| receptor protein kinase, putative [Ricinus c...    95   1e-17
ref|XP_004140293.1| PREDICTED: probable receptor protein kinase ...    92   2e-16
ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|XP_002281552.2| PREDICTED: probable receptor protein kinase ...    86   1e-14

>ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|222848187|gb|EEE85734.1|
           predicted protein [Populus trichocarpa]
          Length = 946

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 69/163 (42%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
 Frame = +2

Query: 287 IFLVIFA--LKGVDSQAD-DTQVMNDLKKSLVLVLPSDL-WTEQHYCDWRGITCDDSKNR 454
           IFLV F+   +   SQA  D +VM  LKKSL +  P  L W++   C W  + C D K R
Sbjct: 14  IFLVGFSSIFRYASSQASPDAEVMLSLKKSLNV--PDSLGWSDPDPCKWNHVGCSDEK-R 70

Query: 455 VTRIQLKDDSNEAAVAMTGALPSNFNNLTALQHLEFRGKDIHVGGALPSLKGLTSLEVIL 634
           VTRIQ+   +      + G LPSN  NLT L+ LE +  +I   G LPSL GL+SL+VIL
Sbjct: 71  VTRIQIGRQN------LQGTLPSNLQNLTQLERLELQYNNI--SGHLPSLNGLSSLQVIL 122

Query: 635 LSQNNFTSIPDDFFEXXXXXXXXXXXXXXXXXXXIPSSLQTCS 763
           LS N FTS+P DFF                    IP S+Q  S
Sbjct: 123 LSDNKFTSVPSDFFAGLSSLQSVEIDNNPFSNWVIPESIQNAS 165


>ref|XP_002533475.1| receptor protein kinase, putative [Ricinus communis]
           gi|223526668|gb|EEF28907.1| receptor protein kinase,
           putative [Ricinus communis]
          Length = 951

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 67/171 (39%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
 Frame = +2

Query: 260 FRSMVEALGIFLVIFA-LKGVDSQADDTQVMNDLKKSLVLVLPSDL-WTEQHYCDWRGIT 433
           F+S++  L  F   F  +    S ++D  VM  L+KSL +  P  L W++   C+W+ +T
Sbjct: 9   FKSLLIFLSGFCSFFVNVSCQGSPSEDAPVMFALRKSLNV--PDSLGWSDPDPCNWKHVT 66

Query: 434 CDDSKNRVTRIQLKDDSNEAAVAMTGALPSNFNNLTALQHLEFRGKDIHVGGALPSLKGL 613
           C D K RVTRIQ+   + E      G LPSN  NLT L+ LE +   I   G LP+LKGL
Sbjct: 67  CSDEK-RVTRIQIGRQNLE------GTLPSNLQNLTQLERLELQWNSI--SGPLPTLKGL 117

Query: 614 TSLEVILLSQNNFTSIPDDFFEXXXXXXXXXXXXXXXXXXXIPSSLQTCSA 766
            SL V++LS N FTSIP DFF                    IP S++  SA
Sbjct: 118 ASLLVVMLSGNQFTSIPSDFFTGLSSLQSVEIDDNPFSTWVIPESIKDASA 168


>ref|XP_004140293.1| PREDICTED: probable receptor protein kinase TMK1-like [Cucumis
           sativus] gi|449479894|ref|XP_004155738.1| PREDICTED:
           probable receptor protein kinase TMK1-like [Cucumis
           sativus]
          Length = 953

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
 Frame = +2

Query: 248 THFCFRSMVEALGIFLVIFALKGVDSQADDTQVMNDLKKSLVLVLPSDL--WTEQHYCDW 421
           THF  +  +  L IF +  +++  +  + D   M  LKKSL    P++   W++ + C W
Sbjct: 6   THFVNKHFL-ILAIFSIFHSVEPQEL-SPDAPAMTALKKSLN---PTESLGWSDPNPCKW 60

Query: 422 RGITCDDSKNRVTRIQLKDDSNEAAVAMTGALPSNFNNLTALQHLEFRGKDIHVGGALPS 601
             + C D  NRVTRIQ+   +      + G LP N  NLTAL+ LE +   I   G LPS
Sbjct: 61  NHVLCSDD-NRVTRIQIGRQN------LQGMLPLNLQNLTALERLELQWNKI--SGPLPS 111

Query: 602 LKGLTSLEVILLSQNNFTSIPDDFFEXXXXXXXXXXXXXXXXXXXIPSSLQTCS 763
           L GLTSL+V+LLS N FTSIP DFF                    IP+SL+  S
Sbjct: 112 LSGLTSLQVLLLSGNQFTSIPSDFFAGMTSLQAVEIDENPFSAWEIPASLRNAS 165


>ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|222844653|gb|EEE82200.1|
           predicted protein [Populus trichocarpa]
          Length = 945

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 65/164 (39%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
 Frame = +2

Query: 287 IFLVIFA--LKGVDSQAD-DTQVMNDLKKSLVLVLPSDL-WTEQHYCDWRGITCDDSKNR 454
           +FLV F+      +SQ   D +VM  LKKSL +  P  L W++   C+W  + C D K R
Sbjct: 14  VFLVGFSSIFHFANSQTSPDAEVMFSLKKSLNV--PDSLGWSDPDPCNWNHVVCSDEK-R 70

Query: 455 VTRIQLKDDSNEAAVAMTGALPSNFNNLTALQHLEFRGKDIHVGGALPSLKGLTSLEVIL 634
           VTRIQ+   +      + G LPSN  NL  L+ LE +  +I   G LPSL GL+SL+VIL
Sbjct: 71  VTRIQIGRQN------LQGTLPSNLRNLAQLERLELQYNNI--SGPLPSLNGLSSLQVIL 122

Query: 635 LSQNNFTSIPDDFFEXXXXXXXXXXXXXXXXXXXIPSSLQTCSA 766
           LS N F S+P DFF                    IP S++  SA
Sbjct: 123 LSDNKFISVPSDFFTGLSSLQSVEIDNNPFSNWVIPESIKNASA 166


>ref|XP_002281552.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis
           vinifera]
          Length = 937

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
 Frame = +2

Query: 323 SQADDTQVMNDLKKSLVLVLPSDL-WTEQHYCDWRGITCDDSKNRVTRIQLKDDSNEAAV 499
           S + D  VM  LKK+L    PSDL W++   C W G++CD  + RVTRIQ+   +     
Sbjct: 23  SSSGDADVMQVLKKNLNQ--PSDLGWSDSDPCKWDGVSCDGDR-RVTRIQIGGKN----- 74

Query: 500 AMTGALPSNFNNLTALQHLEFRGKDIHVGGALPSLKGLTSLEVILLSQNNFTSIPDDFFE 679
            + G+LPSN  +LTAL+ LE +   +   G LPSL  L+ L+ +LLS NNFTS+P  FF+
Sbjct: 75  -LKGSLPSNLTDLTALEILEVQYNQL--SGPLPSLSRLSLLQRLLLSNNNFTSVPSGFFD 131


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