BLASTX nr result

ID: Cimicifuga21_contig00002239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002239
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
gb|AAM63085.1| putative ubiquinol--cytochrome-c reductase [Arabi...   137   2e-30
ref|NP_172964.1| Ubiquinol-cytochrome C reductase hinge protein ...   136   3e-30
ref|XP_002300923.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30
ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6...   134   2e-29

>ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|222856942|gb|EEE94489.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  141 bits (355), Expect = 1e-31
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = -2

Query: 515 MADEELVDPKKYLEDAYKPKCVKPLLEYQACVKRIQDDETGHKHCTGQYFDYWSCVDKCV 336
           MADEE VDPKKYLE+A KPKCV+PLLEYQACVKRIQ DE+GHKHCTGQYFDYWSCVDKCV
Sbjct: 1   MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 335 APKLFTKLK 309
           APKLFTKLK
Sbjct: 61  APKLFTKLK 69


>gb|AAM63085.1| putative ubiquinol--cytochrome-c reductase [Arabidopsis thaliana]
          Length = 69

 Score =  137 bits (344), Expect = 2e-30
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = -2

Query: 515 MADEELVDPKKYLEDAYKPKCVKPLLEYQACVKRIQDDETGHKHCTGQYFDYWSCVDKCV 336
           MAD+E+VDPKKYLE++ KPKCVKPLLEYQACVKRIQ D++GHKHCTGQYFDYW C+DKCV
Sbjct: 1   MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQSDDSGHKHCTGQYFDYWQCIDKCV 60

Query: 335 APKLFTKLK 309
           APKLF KLK
Sbjct: 61  APKLFAKLK 69


>ref|NP_172964.1| Ubiquinol-cytochrome C reductase hinge protein [Arabidopsis
           thaliana] gi|110740918|dbj|BAE98555.1|
           ubiquinol-cytochrome-c reductase like protein
           [Arabidopsis thaliana] gi|114050691|gb|ABI49495.1|
           At1g15120 [Arabidopsis thaliana]
           gi|227204459|dbj|BAH57081.1| AT1G15120 [Arabidopsis
           thaliana] gi|332191146|gb|AEE29267.1|
           Ubiquinol-cytochrome C reductase hinge protein
           [Arabidopsis thaliana]
          Length = 69

 Score =  136 bits (343), Expect = 3e-30
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = -2

Query: 515 MADEELVDPKKYLEDAYKPKCVKPLLEYQACVKRIQDDETGHKHCTGQYFDYWSCVDKCV 336
           MAD+E+VDPKKYLE++ KPKCVKPLLEYQACVKRIQ D++GHKHCTGQYFDYW C+DKCV
Sbjct: 1   MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCV 60

Query: 335 APKLFTKLK 309
           APKLF KLK
Sbjct: 61  APKLFAKLK 69


>ref|XP_002300923.1| predicted protein [Populus trichocarpa] gi|222842649|gb|EEE80196.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  136 bits (342), Expect = 4e-30
 Identities = 61/69 (88%), Positives = 65/69 (94%)
 Frame = -2

Query: 515 MADEELVDPKKYLEDAYKPKCVKPLLEYQACVKRIQDDETGHKHCTGQYFDYWSCVDKCV 336
           MADEE VDPKKYLE++ KPKCV+PLLEYQACVKRIQ DETGHKHCTGQYFDYWSCVDKCV
Sbjct: 1   MADEEPVDPKKYLEESCKPKCVRPLLEYQACVKRIQGDETGHKHCTGQYFDYWSCVDKCV 60

Query: 335 APKLFTKLK 309
           A KLF+KLK
Sbjct: 61  ALKLFSKLK 69


>ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6-like [Cucumis sativus]
           gi|449528698|ref|XP_004171340.1| PREDICTED: cytochrome
           b-c1 complex subunit 6-like [Cucumis sativus]
          Length = 69

 Score =  134 bits (337), Expect = 2e-29
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = -2

Query: 515 MADEELVDPKKYLEDAYKPKCVKPLLEYQACVKRIQDDETGHKHCTGQYFDYWSCVDKCV 336
           MADEE VD K+YLE+A KPKCVKPLLEYQACVKRIQ D++GHKHCTGQYFDYWSC+DKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 335 APKLFTKLK 309
           APKL TKLK
Sbjct: 61  APKLLTKLK 69


Top