BLASTX nr result
ID: Cimicifuga21_contig00002234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00002234
(1673 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ... 385 e-104
ref|XP_002511905.1| conserved hypothetical protein [Ricinus comm... 379 e-102
gb|ABK94247.1| unknown [Populus trichocarpa] 374 e-101
ref|XP_002320819.1| predicted protein [Populus trichocarpa] gi|2... 370 e-100
gb|ABB16971.1| unknown [Solanum tuberosum] 367 7e-99
>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
Length = 350
Score = 385 bits (988), Expect = e-104
Identities = 199/356 (55%), Positives = 253/356 (71%)
Frame = -3
Query: 1296 MSRPHDGQRPLFHFGNPFRMIFPKETYLSPQLLTLLNSFEETLAAILKNLRPKDTNDVLS 1117
MSRP + RP F FGNPFRMI PK +YLSP+LL+LLN FE TLA L+ L+PK T DVLS
Sbjct: 1 MSRPQEPHRPSFPFGNPFRMILPKGSYLSPRLLSLLNDFENTLAERLRKLKPKGTEDVLS 60
Query: 1116 LSWMILAMKSLCEIHTNIKVLITELEFPVSDWDQKWMDVYLDNSVRLLDICIAFNXXXXX 937
SWM LAM+ LCEIH +IK+LIT+LE PV DWD KW+DVYLDNSV+LLDICIA +
Sbjct: 61 CSWMKLAMELLCEIHKDIKILITDLELPVCDWDDKWIDVYLDNSVKLLDICIALSSELSR 120
Query: 936 XXXXXXXXQCVRHALDVSSSFPSSVQLTQSHTSLEEWMQQISTRSTRLDSCTSILHELVA 757
QCV LD +S QL ++ +SL+ W Q I +++ +L +C +IL L
Sbjct: 121 LNQGHLLLQCVLRNLDTASP----KQLVRARSSLDSWRQHIGSKNPKLQNCLTILDSLAE 176
Query: 756 SLYSPKIKDSAKGNVLMRAMYGVKVVTIFVCSVFAAGFSGSSKTLMSLQVSDKLLWAKAF 577
S+ PKIK+SAKG VLMRAMYGV+V T+FVCSVFAA F+GS+ L+ L V+D LW++AF
Sbjct: 177 SINLPKIKNSAKGKVLMRAMYGVRVGTVFVCSVFAAAFTGSANKLIDLHVADTFLWSEAF 236
Query: 576 NDVQFNVNGEIRRLFSHGNMTVLKELEAVDSSVKKLHTTTQNGFNQTEAVTLKVSVLDLG 397
D+Q VN EIR FS G +TVLKELEAVD+S+ KL+ Q+G E T + SV DLG
Sbjct: 237 TDLQSYVNVEIRNTFSSGRVTVLKELEAVDTSINKLYPMVQDGVGPAEDGTFQNSVSDLG 296
Query: 396 SKMERFSQGLDLLSKEVEGFFQIVLTGRDALLCNLRIDSSISNPKQETNVKQQVVR 229
+E+ S+GLDLL+K+V+GFFQ+VLTGRDALLCNLR+ +P E N + +++R
Sbjct: 297 KSVEKLSEGLDLLTKDVDGFFQMVLTGRDALLCNLRV-----SPMHEDNTQARILR 347
>ref|XP_002511905.1| conserved hypothetical protein [Ricinus communis]
gi|223549085|gb|EEF50574.1| conserved hypothetical
protein [Ricinus communis]
Length = 381
Score = 379 bits (972), Expect = e-102
Identities = 197/355 (55%), Positives = 254/355 (71%)
Frame = -3
Query: 1296 MSRPHDGQRPLFHFGNPFRMIFPKETYLSPQLLTLLNSFEETLAAILKNLRPKDTNDVLS 1117
MS P + RP F FGNPFRM+ PK + L+P+LL+LLN+FEETL LK L PKD +DVLS
Sbjct: 1 MSTPQEPHRPFFSFGNPFRMMSPKGSQLTPRLLSLLNAFEETLVERLKKLIPKDKDDVLS 60
Query: 1116 LSWMILAMKSLCEIHTNIKVLITELEFPVSDWDQKWMDVYLDNSVRLLDICIAFNXXXXX 937
L+WM AM+SLCE HT+IK LIT+LE PV++WD+KW+DVYLD SV+LLDICIAF+
Sbjct: 61 LTWMKSAMESLCETHTDIKTLITDLELPVANWDEKWIDVYLDISVKLLDICIAFSSELSR 120
Query: 936 XXXXXXXXQCVRHALDVSSSFPSSVQLTQSHTSLEEWMQQISTRSTRLDSCTSILHELVA 757
QCV H L+ ++S Q ++ SL+ W Q IS+++ R+++C SIL L
Sbjct: 121 LNQGHLLLQCVLHNLESNTS----KQFVRASASLDSWRQHISSKNQRVENCRSILENLRG 176
Query: 756 SLYSPKIKDSAKGNVLMRAMYGVKVVTIFVCSVFAAGFSGSSKTLMSLQVSDKLLWAKAF 577
SL PK+K+SAKG VLMRAMYGVKV T+F+CSVFAA FS SSK L+ L VSD + WA+AF
Sbjct: 177 SLNLPKVKNSAKGKVLMRAMYGVKVQTVFLCSVFAAAFSNSSKNLLVLDVSDTIKWAQAF 236
Query: 576 NDVQFNVNGEIRRLFSHGNMTVLKELEAVDSSVKKLHTTTQNGFNQTEAVTLKVSVLDLG 397
+D+Q N+N EIR F HG TVLKEL+AVDS VKKL+ Q+G E + SV DL
Sbjct: 237 SDLQTNLNVEIREKFCHGKFTVLKELDAVDSIVKKLYPMIQDGVGPVEVEAFENSVSDLR 296
Query: 396 SKMERFSQGLDLLSKEVEGFFQIVLTGRDALLCNLRIDSSISNPKQETNVKQQVV 232
E+ SQGLDLL+K+V+GFF+IVL+GRDALLC LR ++++ TNV +Q++
Sbjct: 297 KGSEKLSQGLDLLAKQVDGFFKIVLSGRDALLCKLRESGAVNDTTLGTNVGEQLM 351
>gb|ABK94247.1| unknown [Populus trichocarpa]
Length = 354
Score = 374 bits (961), Expect = e-101
Identities = 192/349 (55%), Positives = 249/349 (71%)
Frame = -3
Query: 1296 MSRPHDGQRPLFHFGNPFRMIFPKETYLSPQLLTLLNSFEETLAAILKNLRPKDTNDVLS 1117
MS+P RP F FGNPFRM+ PK + LSP+LL+LLN+FEE LAA L+ L PKD DVLS
Sbjct: 1 MSQPQQPHRPFFPFGNPFRMLSPKGSQLSPRLLSLLNTFEEALAARLRKLNPKDKGDVLS 60
Query: 1116 LSWMILAMKSLCEIHTNIKVLITELEFPVSDWDQKWMDVYLDNSVRLLDICIAFNXXXXX 937
+WM LAM+SLCE HT IK LITELE PV++WD+KW+DVYLD +V+LLDICIAF+
Sbjct: 61 FTWMKLAMESLCETHTVIKTLITELELPVTEWDEKWIDVYLDITVKLLDICIAFSSELSW 120
Query: 936 XXXXXXXXQCVRHALDVSSSFPSSVQLTQSHTSLEEWMQQISTRSTRLDSCTSILHELVA 757
QC H L+ ++S +L Q+ +SL+ W Q I +++ RL++C SIL LV
Sbjct: 121 LNQGQLFLQCALHKLESNNS----EKLMQACSSLDSWRQHIGSKNPRLENCKSILENLVD 176
Query: 756 SLYSPKIKDSAKGNVLMRAMYGVKVVTIFVCSVFAAGFSGSSKTLMSLQVSDKLLWAKAF 577
SL PK+K+SAKG VLMRAMYGVKV T+FVCSVFAA FS +SK L+ L V + +LWA+A+
Sbjct: 177 SLTLPKVKNSAKGKVLMRAMYGVKVQTVFVCSVFAAAFSVNSKNLIDLDVPNTILWAQAY 236
Query: 576 NDVQFNVNGEIRRLFSHGNMTVLKELEAVDSSVKKLHTTTQNGFNQTEAVTLKVSVLDLG 397
+D+Q VNGEIR +FS G T LKEL+ V++ V L+ Q+G TE S DLG
Sbjct: 237 SDLQTTVNGEIREVFSRGKFTFLKELDEVETVVNNLYPMIQDGMGPTEVEAFSSSFSDLG 296
Query: 396 SKMERFSQGLDLLSKEVEGFFQIVLTGRDALLCNLRIDSSISNPKQETN 250
+ ER SQ LD L+KEV+GFF+IVL+GRDALLCNLR+ ++++P + +N
Sbjct: 297 RRAERLSQVLDFLAKEVDGFFKIVLSGRDALLCNLRVSDTVADPFRGSN 345
>ref|XP_002320819.1| predicted protein [Populus trichocarpa] gi|222861592|gb|EEE99134.1|
predicted protein [Populus trichocarpa]
Length = 338
Score = 370 bits (950), Expect = e-100
Identities = 190/342 (55%), Positives = 244/342 (71%)
Frame = -3
Query: 1296 MSRPHDGQRPLFHFGNPFRMIFPKETYLSPQLLTLLNSFEETLAAILKNLRPKDTNDVLS 1117
MS+P RP F FGNPFRM+ PK + LSP+LL+LLN+FEE LAA L+ L PKD DVLS
Sbjct: 1 MSQPQQPHRPFFPFGNPFRMLSPKGSQLSPRLLSLLNTFEEALAARLRKLNPKDKGDVLS 60
Query: 1116 LSWMILAMKSLCEIHTNIKVLITELEFPVSDWDQKWMDVYLDNSVRLLDICIAFNXXXXX 937
+WM LAM+SLCE HT IK LITELE PV++WD+KW+DVYLD +V+LLDICIAF+
Sbjct: 61 FTWMKLAMESLCETHTVIKTLITELELPVTEWDEKWIDVYLDITVKLLDICIAFSSELSW 120
Query: 936 XXXXXXXXQCVRHALDVSSSFPSSVQLTQSHTSLEEWMQQISTRSTRLDSCTSILHELVA 757
QC H L+ ++S +L Q+ +SL+ W Q I +++ RL++C SIL LV
Sbjct: 121 LNQGQLFLQCALHKLESNNS----EKLMQACSSLDSWRQHIGSKNPRLENCKSILENLVD 176
Query: 756 SLYSPKIKDSAKGNVLMRAMYGVKVVTIFVCSVFAAGFSGSSKTLMSLQVSDKLLWAKAF 577
SL PK+K+SAKG VLMRAMYGVKV T+FVCSVFAA FS +SK L+ L V + +LWA+A+
Sbjct: 177 SLTLPKVKNSAKGKVLMRAMYGVKVQTVFVCSVFAAAFSVNSKNLIDLDVPNTILWAQAY 236
Query: 576 NDVQFNVNGEIRRLFSHGNMTVLKELEAVDSSVKKLHTTTQNGFNQTEAVTLKVSVLDLG 397
+D+Q VNGEIR +FS G T LKEL+ V++ V L+ Q+G TE S DLG
Sbjct: 237 SDLQTTVNGEIREVFSRGKFTFLKELDEVETVVNNLYPMIQDGMGPTEVEAFSSSFSDLG 296
Query: 396 SKMERFSQGLDLLSKEVEGFFQIVLTGRDALLCNLRIDSSIS 271
+ ER SQ LD L+KEV+GFF+IVL+GRDALLCNLR+ +++
Sbjct: 297 RRAERLSQVLDFLAKEVDGFFKIVLSGRDALLCNLRVSDTVA 338
>gb|ABB16971.1| unknown [Solanum tuberosum]
Length = 352
Score = 367 bits (941), Expect = 7e-99
Identities = 189/357 (52%), Positives = 253/357 (70%), Gaps = 1/357 (0%)
Frame = -3
Query: 1296 MSRPHDGQRPLFHFGNPFRMIFPKETYLSPQLLTLLNSFEETLAAILKNLRPKDTNDVLS 1117
MSRP + RP FGNPF+ I PK +YLSP+LL LLN+FEE+LA +K+L+P D+L+
Sbjct: 1 MSRPQEPHRPFLPFGNPFKFILPKGSYLSPKLLALLNAFEESLAERVKSLKPGGKEDILT 60
Query: 1116 LSWMILAMKSLCEIHTNIKVLITELEFPVSDWDQKWMDVYLDNSVRLLDICIAFNXXXXX 937
LSWM A+ +LC IHT++K LITELE PV DWD+KW+DVYLDNSV+LLDICIAF+
Sbjct: 61 LSWMTQAISTLCAIHTDVKTLITELELPVCDWDEKWIDVYLDNSVKLLDICIAFSSDISR 120
Query: 936 XXXXXXXXQCVRHALDVSSSFPSSVQLTQSHTSLEEWMQQISTRSTRLDSCTSILHELVA 757
QC H LD +S+ Q ++ +S + W Q I++++ RL++C +IL L
Sbjct: 121 LNQGHLYLQCGLHNLDGTSN-----QFMKARSSFDGWKQHINSKNPRLENCFAILDSLTE 175
Query: 756 SLYSPKIKDSAKGNVLMRAMYGVKVVTIFVCSVFAAGFSGSSKTLMSLQVSDKLLWAKAF 577
SL PKIK+SAKG VLMRAMYGV+VVT+F+ S+FA FSGS+K L LQ+ + LW +AF
Sbjct: 176 SLNLPKIKNSAKGKVLMRAMYGVRVVTVFILSMFAVTFSGSTKELKDLQIHETCLWTEAF 235
Query: 576 NDVQFNVNGEIRRLFSHGNMTVLKELEAVDSSVKKLHTTTQNGFNQTEAVTLKVSVLDLG 397
DV+ ++ EIRR++S G +T LKELE VD+SVKKL+ Q+G + EA L + +L
Sbjct: 236 VDVRDFISQEIRRIYSSGRITALKELEVVDTSVKKLYPLIQDGVDPNEAEQLHLLTSNLT 295
Query: 396 SKMERFSQGLDLLSKEVEGFFQIVLTGRDALLCNLRIDSSISNPKQ-ETNVKQQVVR 229
K E+ S GLDLL+KE + FF I+LTGRD+LLCNLRIDS++SNP + NV+++ VR
Sbjct: 296 EKAEKLSGGLDLLAKEADRFFHILLTGRDSLLCNLRIDSTVSNPAEVNNNVERKEVR 352