BLASTX nr result

ID: Cimicifuga21_contig00002233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002233
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134014.1| PREDICTED: probable voltage-gated potassium ...   630   e-178
ref|XP_002285645.1| PREDICTED: probable voltage-gated potassium ...   629   e-178
ref|XP_002518142.1| potassium channel beta, putative [Ricinus co...   626   e-177
ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|2...   624   e-176
gb|ABK94399.1| unknown [Populus trichocarpa]                          623   e-176

>ref|XP_004134014.1| PREDICTED: probable voltage-gated potassium channel subunit beta-like
            [Cucumis sativus] gi|449487512|ref|XP_004157663.1|
            PREDICTED: probable voltage-gated potassium channel
            subunit beta-like [Cucumis sativus]
          Length = 328

 Score =  630 bits (1624), Expect = e-178
 Identities = 303/328 (92%), Positives = 321/328 (97%)
 Frame = +1

Query: 103  MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 282
            MQYKNLGRSGLKVSQLSYGAWVSFGNQLDV+EAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1    MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVREAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 283  EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIIEGTKASLKRLDMDYVDVIY 462
            EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHI+EGTKASLKRLDM+YVDVIY
Sbjct: 61   EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTKASLKRLDMEYVDVIY 120

Query: 463  CHRPDISTPIEETVRAMNYVIDNGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 642
            CHRPD STPIEETVRAMNYVID GWAFYWGTSEWSAQQITEAWG+A+RLDLVGPIVEQPE
Sbjct: 121  CHRPDSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIADRLDLVGPIVEQPE 180

Query: 643  YNLLNRHKVESEYLPLYNNYGIGLTTWSPLASGVLTGKYNKGTIPSDSRFALENYKNLAS 822
            YNLL+RHKVESE+LPLY+NYGIGLTTWSPLASGVLTGKYNKG+IP DSRFALENYKNLA+
Sbjct: 181  YNLLSRHKVESEFLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLAN 240

Query: 823  RSLVDDVLKKVNGLKPIADELGVPLSQLSIAWCASNPNVSSVITGATKEYQIEENMKAID 1002
            RSLVDDVL+KVNGLKPIADELGVPLSQL+IAWCA+NPNVSSVITGATKE QI+ENMKA+D
Sbjct: 241  RSLVDDVLRKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKAVD 300

Query: 1003 VIPKLTPEVLEKIDAVVQSKPKRQESYR 1086
            VIP LTP V+EKI+AVVQSKPKR ES+R
Sbjct: 301  VIPLLTPAVMEKIEAVVQSKPKRPESFR 328


>ref|XP_002285645.1| PREDICTED: probable voltage-gated potassium channel subunit beta
            [Vitis vinifera]
          Length = 328

 Score =  629 bits (1621), Expect = e-178
 Identities = 306/328 (93%), Positives = 319/328 (97%)
 Frame = +1

Query: 103  MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 282
            MQY+NLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRD+GVNFFDNAEVYANGRAE
Sbjct: 1    MQYRNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDNGVNFFDNAEVYANGRAE 60

Query: 283  EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIIEGTKASLKRLDMDYVDVIY 462
            EIMGQAIRELGWKRSD+VVSTKIFWGG GPNDKGLSRKHIIEGTKASLKRLDM+YVDVIY
Sbjct: 61   EIMGQAIRELGWKRSDVVVSTKIFWGGSGPNDKGLSRKHIIEGTKASLKRLDMEYVDVIY 120

Query: 463  CHRPDISTPIEETVRAMNYVIDNGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 642
            CHRPD STPIEETVRAMNYVID+GWAFYWGTSEWSAQQITEAWGVA RLDLVGPIVEQPE
Sbjct: 121  CHRPDSSTPIEETVRAMNYVIDHGWAFYWGTSEWSAQQITEAWGVAERLDLVGPIVEQPE 180

Query: 643  YNLLNRHKVESEYLPLYNNYGIGLTTWSPLASGVLTGKYNKGTIPSDSRFALENYKNLAS 822
            YNLL+RHKVE EYLPLY+NYGIGLTTWSPLASGVLTGKYNKGTIP DSRFALENYKNLAS
Sbjct: 181  YNLLSRHKVECEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGTIPQDSRFALENYKNLAS 240

Query: 823  RSLVDDVLKKVNGLKPIADELGVPLSQLSIAWCASNPNVSSVITGATKEYQIEENMKAID 1002
            RSLVDDVL+KVNGLKPIADELGVPLSQL+IAWCA+NPNVSSVITGATKE QI+ENMKAID
Sbjct: 241  RSLVDDVLRKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKAID 300

Query: 1003 VIPKLTPEVLEKIDAVVQSKPKRQESYR 1086
            VIP LTP VLEKI+AVVQSKPKR +SYR
Sbjct: 301  VIPLLTPTVLEKIEAVVQSKPKRPDSYR 328


>ref|XP_002518142.1| potassium channel beta, putative [Ricinus communis]
            gi|223542738|gb|EEF44275.1| potassium channel beta,
            putative [Ricinus communis]
          Length = 328

 Score =  626 bits (1615), Expect = e-177
 Identities = 302/328 (92%), Positives = 317/328 (96%)
 Frame = +1

Query: 103  MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 282
            MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1    MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 283  EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIIEGTKASLKRLDMDYVDVIY 462
            EIMGQAIRELGWKRSDIVVSTKIFWGG GPNDKGLSRKHI+EGTKASLKRLDMDYVDVIY
Sbjct: 61   EIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIY 120

Query: 463  CHRPDISTPIEETVRAMNYVIDNGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 642
            CHRPD STPIEET+RAMN+VID GWAFYWGTSEWSAQQITEAWG+A RLDLVGPIVEQPE
Sbjct: 121  CHRPDSSTPIEETIRAMNHVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPE 180

Query: 643  YNLLNRHKVESEYLPLYNNYGIGLTTWSPLASGVLTGKYNKGTIPSDSRFALENYKNLAS 822
            YNLL+RHKVESEYLPLY NYG+GLTTWSPLASGVLTGKY++G IP DSRFALENYKNLAS
Sbjct: 181  YNLLSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSRGAIPPDSRFALENYKNLAS 240

Query: 823  RSLVDDVLKKVNGLKPIADELGVPLSQLSIAWCASNPNVSSVITGATKEYQIEENMKAID 1002
            RSL+DDVLKKVNGLKPIADELGVPLSQL+IAWCA+NPNVSSVITGATKE QI+ENMKAID
Sbjct: 241  RSLIDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKAID 300

Query: 1003 VIPKLTPEVLEKIDAVVQSKPKRQESYR 1086
            VIP LTP V+EKI+AVVQSKPKR +SYR
Sbjct: 301  VIPLLTPAVMEKIEAVVQSKPKRPDSYR 328


>ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|222846544|gb|EEE84091.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  624 bits (1610), Expect = e-176
 Identities = 301/328 (91%), Positives = 316/328 (96%)
 Frame = +1

Query: 103  MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 282
            MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1    MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 283  EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIIEGTKASLKRLDMDYVDVIY 462
            EIMGQAIRELGWKRSDIVVSTKIFWGG GPNDKGLSRKHI+EGTKASLKRLDMDYVDVIY
Sbjct: 61   EIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHILEGTKASLKRLDMDYVDVIY 120

Query: 463  CHRPDISTPIEETVRAMNYVIDNGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 642
            CHRPD  TPIEETVRAMNYVID GWAFYWGTSEWSAQQITEAWG+A RLDLVGPIVEQPE
Sbjct: 121  CHRPDTFTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPE 180

Query: 643  YNLLNRHKVESEYLPLYNNYGIGLTTWSPLASGVLTGKYNKGTIPSDSRFALENYKNLAS 822
            YN+L+RHKVESEY+PLY  YG+GLTTWSPLASGVLTGKYNKG +PSDSRFALENYKNLAS
Sbjct: 181  YNMLSRHKVESEYVPLYTTYGLGLTTWSPLASGVLTGKYNKGGVPSDSRFALENYKNLAS 240

Query: 823  RSLVDDVLKKVNGLKPIADELGVPLSQLSIAWCASNPNVSSVITGATKEYQIEENMKAID 1002
            RSLVDDVLKKVNGLKPIADELGVPLSQL+IAWCA+NPNVSSVITGATKE QI+ENMKA+D
Sbjct: 241  RSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKAVD 300

Query: 1003 VIPKLTPEVLEKIDAVVQSKPKRQESYR 1086
            VIP LTP V+EKI+AVVQSKPKR +S+R
Sbjct: 301  VIPLLTPPVMEKIEAVVQSKPKRPDSFR 328


>gb|ABK94399.1| unknown [Populus trichocarpa]
          Length = 328

 Score =  623 bits (1607), Expect = e-176
 Identities = 300/328 (91%), Positives = 316/328 (96%)
 Frame = +1

Query: 103  MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 282
            MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1    MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 283  EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIIEGTKASLKRLDMDYVDVIY 462
            EIMGQAIRELGWKRSDIVVSTKIFWGG GPNDKGLSRKHI+EGTKASLKRLDMDYVDVIY
Sbjct: 61   EIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHILEGTKASLKRLDMDYVDVIY 120

Query: 463  CHRPDISTPIEETVRAMNYVIDNGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 642
            CHRPD  TPIEETVRAMNYVID GWAFYWGTSEWSAQQITEAWG+A RLDLVGPIVEQPE
Sbjct: 121  CHRPDTFTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPE 180

Query: 643  YNLLNRHKVESEYLPLYNNYGIGLTTWSPLASGVLTGKYNKGTIPSDSRFALENYKNLAS 822
            YN+L+RHKVESEY+PLY  YG+GLTTWSPLASGVLTGKYNKG +PSDSRFALENYKNLAS
Sbjct: 181  YNMLSRHKVESEYVPLYTTYGLGLTTWSPLASGVLTGKYNKGGVPSDSRFALENYKNLAS 240

Query: 823  RSLVDDVLKKVNGLKPIADELGVPLSQLSIAWCASNPNVSSVITGATKEYQIEENMKAID 1002
            RSLVDDVLKKVNGLKPIADELGVPLSQL+IAWCA+NPNVSSVITGATKE QI+ENMKA+D
Sbjct: 241  RSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKAVD 300

Query: 1003 VIPKLTPEVLEKIDAVVQSKPKRQESYR 1086
            VIP LTP V+EKI+AVVQSKPKR +++R
Sbjct: 301  VIPLLTPAVMEKIEAVVQSKPKRPDTFR 328


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