BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002206
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              388   e-105
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   388   e-105
ref|XP_003622426.1| U4/U6 small nuclear ribonucleoprotein Prp31 ...   377   e-102
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re...   377   e-102
ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...   377   e-102

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  388 bits (997), Expect = e-105
 Identities = 204/249 (81%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = -1

Query: 745 NENDVLKEDESNADDMEEDIDGDMADIENLNYDDLDSVSILQKTQRYVDIMQKVEDALQK 566
           NE D+  ED+    +MEED DG+MADIE LNYDDLDSVS LQKTQRY+DIMQKVEDAL+K
Sbjct: 56  NEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKTQRYIDIMQKVEDALEK 115

Query: 565 GN-MSIQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPI 389
           G+ MS  G VLEDDPEYQLIVDCNALSVDIENEIVI+HNFIRDNYRLKFPELESLVHHPI
Sbjct: 116 GSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPI 175

Query: 388 DYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXX 209
           DYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL+KT+       
Sbjct: 176 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLKKTVDACDRAL 235

Query: 208 XXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 29
                     DFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKMPACNVQLLGAK
Sbjct: 236 ALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAK 295

Query: 28  KKTLAGFST 2
           KK LAGFST
Sbjct: 296 KKNLAGFST 304


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  388 bits (997), Expect = e-105
 Identities = 204/249 (81%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = -1

Query: 745 NENDVLKEDESNADDMEEDIDGDMADIENLNYDDLDSVSILQKTQRYVDIMQKVEDALQK 566
           NE D+  ED+    +MEED DG+MADIE LNYDDLDSVS LQKTQRY+DIMQKVEDAL+K
Sbjct: 22  NEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKTQRYIDIMQKVEDALEK 81

Query: 565 GN-MSIQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPI 389
           G+ MS  G VLEDDPEYQLIVDCNALSVDIENEIVI+HNFIRDNYRLKFPELESLVHHPI
Sbjct: 82  GSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPI 141

Query: 388 DYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXX 209
           DYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL+KT+       
Sbjct: 142 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLKKTVDACDRAL 201

Query: 208 XXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 29
                     DFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKMPACNVQLLGAK
Sbjct: 202 ALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAK 261

Query: 28  KKTLAGFST 2
           KK LAGFST
Sbjct: 262 KKNLAGFST 270


>ref|XP_003622426.1| U4/U6 small nuclear ribonucleoprotein Prp31 [Medicago truncatula]
           gi|355497441|gb|AES78644.1| U4/U6 small nuclear
           ribonucleoprotein Prp31 [Medicago truncatula]
          Length = 438

 Score =  377 bits (969), Expect = e-102
 Identities = 195/248 (78%), Positives = 216/248 (87%)
 Frame = -1

Query: 745 NENDVLKEDESNADDMEEDIDGDMADIENLNYDDLDSVSILQKTQRYVDIMQKVEDALQK 566
           NE ++  +++++A DM+ED+DGD+AD+ENLNYDDLDSVS LQ+TQRYVD+MQKVE+AL+K
Sbjct: 18  NEAEIPADNDADAADMDEDVDGDLADLENLNYDDLDSVSKLQQTQRYVDVMQKVEEALKK 77

Query: 565 GNMSIQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPID 386
           G+   QG  LEDDPEYQLIV+CNALSVDIENEIVI+HNFIRD YRLKFPELESLVHHPID
Sbjct: 78  GSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPID 137

Query: 385 YARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXXX 206
           YARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L KTI        
Sbjct: 138 YARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTIEACDRALA 197

Query: 205 XXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 26
                    DFVESRMGYI+PN+SAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK
Sbjct: 198 LDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 257

Query: 25  KTLAGFST 2
           K LAGFST
Sbjct: 258 KNLAGFST 265


>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
           [Medicago truncatula]
          Length = 484

 Score =  377 bits (969), Expect = e-102
 Identities = 195/248 (78%), Positives = 216/248 (87%)
 Frame = -1

Query: 745 NENDVLKEDESNADDMEEDIDGDMADIENLNYDDLDSVSILQKTQRYVDIMQKVEDALQK 566
           NE ++  +++++A DM+ED+DGD+AD+ENLNYDDLDSVS LQ+TQRYVD+MQKVE+AL+K
Sbjct: 18  NEAEIPADNDADAADMDEDVDGDLADLENLNYDDLDSVSKLQQTQRYVDVMQKVEEALKK 77

Query: 565 GNMSIQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPID 386
           G+   QG  LEDDPEYQLIV+CNALSVDIENEIVI+HNFIRD YRLKFPELESLVHHPID
Sbjct: 78  GSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPID 137

Query: 385 YARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXXX 206
           YARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L KTI        
Sbjct: 138 YARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTIEACDRALA 197

Query: 205 XXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 26
                    DFVESRMGYI+PN+SAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK
Sbjct: 198 LDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 257

Query: 25  KTLAGFST 2
           K LAGFST
Sbjct: 258 KNLAGFST 265


>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
            communis] gi|223535305|gb|EEF36980.1| U4/U6 small nuclear
            ribonucleoprotein Prp31, putative [Ricinus communis]
          Length = 774

 Score =  377 bits (967), Expect = e-102
 Identities = 198/249 (79%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = -1

Query: 745  NENDVLKEDESNADDMEEDIDGDMADIENLNYDDLDSVSILQKTQRYVDIMQKVEDALQK 566
            N+ D+++E++++A +MEED+DGDMADIE LNYDDLDSVS LQKTQR+ DIMQKVE AL+K
Sbjct: 334  NDADIIEEEDADAGNMEEDVDGDMADIEALNYDDLDSVSKLQKTQRFNDIMQKVEGALEK 393

Query: 565  GN-MSIQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPI 389
            G+  S  G VLEDDPEYQLIVDCNALSVDIENEI+I+HNFIRD YRLKFPELESLVHHPI
Sbjct: 394  GSDESDHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPI 453

Query: 388  DYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXX 209
            DYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPL EE L+KT+       
Sbjct: 454  DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEEVLQKTVDACDRAL 513

Query: 208  XXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 29
                      DFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK
Sbjct: 514  ALDTAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 573

Query: 28   KKTLAGFST 2
            KK LAGFST
Sbjct: 574  KKNLAGFST 582