BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002205
         (2113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              639   e-180
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   639   e-180
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re...   623   e-176
ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   610   e-172
ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   608   e-171

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  639 bits (1647), Expect = e-180
 Identities = 343/467 (73%), Positives = 372/467 (79%), Gaps = 1/467 (0%)
 Frame = -1

Query: 1906 NENNVLKEDDSNADDMEEDIDGDMADIENLNYDDLDSVSKLQKSQRYVDIMQKVEDALQK 1727
            NE ++  EDD    +MEED DG+MADIE LNYDDLDSVSKLQK+QRY+DIMQKVEDAL+K
Sbjct: 56   NEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKTQRYIDIMQKVEDALEK 115

Query: 1726 GN-MSNQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPI 1550
            G+ MSN G VLEDDPEYQLIVDCNALSVDIENEIVI+HNFIRDNYRLKFPELESLVHHPI
Sbjct: 116  GSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPI 175

Query: 1549 DYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXX 1370
            DYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL+KT+       
Sbjct: 176  DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLKKTVDACDRAL 235

Query: 1369 XXXXAKKEVLDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 1190
                AKK+VLDFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKMPACNVQLLGAK
Sbjct: 236  ALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAK 295

Query: 1189 KKTLAGFSTASSQLHVGFVEQTEIFQSTPPSLRNRACRLVAAKATLAARVDSIRGDPTGK 1010
            KK LAGFSTA+SQ  VG++EQTEIFQSTPPSLR RACRL+AAK+TL+ARVDS RGDPTGK
Sbjct: 296  KKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSARVDSTRGDPTGK 355

Query: 1009 TGRTLRDEIRKKIEKWQEXXXXXXXXXXXXPDSDPXXXXXXXXXXXXXXRYAVTDMRKLA 830
            TGRTLR+EI KKIEKWQE            PDS+P              RYA+TDMRKLA
Sbjct: 356  TGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRKLA 415

Query: 829  NRMQFGVPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLXXXXXXXXXXKHFXXXXXX 650
            NRMQFGVPEESS               G+GKLRVS+GQS+L          K +      
Sbjct: 416  NRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAKVAKKFKEKQYGSSGAT 475

Query: 649  XXXXXXXAFTPVQGIELTNPQAHANQLGSGTQSTYFSEIGTFSKIRR 509
                   AFTPVQGIEL+NPQAHANQLGSGTQSTYFSEIGTFSKI+R
Sbjct: 476  SGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFSKIKR 522


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
            vinifera]
          Length = 489

 Score =  639 bits (1647), Expect = e-180
 Identities = 343/467 (73%), Positives = 372/467 (79%), Gaps = 1/467 (0%)
 Frame = -1

Query: 1906 NENNVLKEDDSNADDMEEDIDGDMADIENLNYDDLDSVSKLQKSQRYVDIMQKVEDALQK 1727
            NE ++  EDD    +MEED DG+MADIE LNYDDLDSVSKLQK+QRY+DIMQKVEDAL+K
Sbjct: 22   NEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKTQRYIDIMQKVEDALEK 81

Query: 1726 GN-MSNQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPI 1550
            G+ MSN G VLEDDPEYQLIVDCNALSVDIENEIVI+HNFIRDNYRLKFPELESLVHHPI
Sbjct: 82   GSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPI 141

Query: 1549 DYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXX 1370
            DYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL+KT+       
Sbjct: 142  DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLKKTVDACDRAL 201

Query: 1369 XXXXAKKEVLDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 1190
                AKK+VLDFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKMPACNVQLLGAK
Sbjct: 202  ALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAK 261

Query: 1189 KKTLAGFSTASSQLHVGFVEQTEIFQSTPPSLRNRACRLVAAKATLAARVDSIRGDPTGK 1010
            KK LAGFSTA+SQ  VG++EQTEIFQSTPPSLR RACRL+AAK+TL+ARVDS RGDPTGK
Sbjct: 262  KKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSARVDSTRGDPTGK 321

Query: 1009 TGRTLRDEIRKKIEKWQEXXXXXXXXXXXXPDSDPXXXXXXXXXXXXXXRYAVTDMRKLA 830
            TGRTLR+EI KKIEKWQE            PDS+P              RYA+TDMRKLA
Sbjct: 322  TGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRKLA 381

Query: 829  NRMQFGVPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLXXXXXXXXXXKHFXXXXXX 650
            NRMQFGVPEESS               G+GKLRVS+GQS+L          K +      
Sbjct: 382  NRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAKVAKKFKEKQYGSSGAT 441

Query: 649  XXXXXXXAFTPVQGIELTNPQAHANQLGSGTQSTYFSEIGTFSKIRR 509
                   AFTPVQGIEL+NPQAHANQLGSGTQSTYFSEIGTFSKI+R
Sbjct: 442  SGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFSKIKR 488


>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
            [Medicago truncatula]
          Length = 484

 Score =  623 bits (1606), Expect = e-176
 Identities = 331/466 (71%), Positives = 370/466 (79%)
 Frame = -1

Query: 1906 NENNVLKEDDSNADDMEEDIDGDMADIENLNYDDLDSVSKLQKSQRYVDIMQKVEDALQK 1727
            NE  +  ++D++A DM+ED+DGD+AD+ENLNYDDLDSVSKLQ++QRYVD+MQKVE+AL+K
Sbjct: 18   NEAEIPADNDADAADMDEDVDGDLADLENLNYDDLDSVSKLQQTQRYVDVMQKVEEALKK 77

Query: 1726 GNMSNQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHPID 1547
            G+  +QG  LEDDPEYQLIV+CNALSVDIENEIVI+HNFIRD YRLKFPELESLVHHPID
Sbjct: 78   GSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPID 137

Query: 1546 YARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXXXX 1367
            YARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L KTI        
Sbjct: 138  YARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTIEACDRALA 197

Query: 1366 XXXAKKEVLDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 1187
               AKK+VLDFVESRMGYI+PN+SAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK
Sbjct: 198  LDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 257

Query: 1186 KTLAGFSTASSQLHVGFVEQTEIFQSTPPSLRNRACRLVAAKATLAARVDSIRGDPTGKT 1007
            K LAGFSTA+SQ HVG++EQTEIFQ+TPPS R RACRLVAAK+TLAARVDSIRGDP+GKT
Sbjct: 258  KNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAKSTLAARVDSIRGDPSGKT 317

Query: 1006 GRTLRDEIRKKIEKWQEXXXXXXXXXXXXPDSDPXXXXXXXXXXXXXXRYAVTDMRKLAN 827
            GR+L+DEI KKIEKWQE            PDS+P              RYA+TDMRKLAN
Sbjct: 318  GRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRKLAN 377

Query: 826  RMQFGVPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLXXXXXXXXXXKHFXXXXXXX 647
            RMQFG+PEESS               GSGKLRVS GQS+L          K +       
Sbjct: 378  RMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAKVAKKFKEKSYGSSGATS 437

Query: 646  XXXXXXAFTPVQGIELTNPQAHANQLGSGTQSTYFSEIGTFSKIRR 509
                  AFTPVQGIEL+NPQAHA+QLGSGTQSTYFSE GTFSKI++
Sbjct: 438  GLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSKIQK 483


>ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine
            max]
          Length = 486

 Score =  610 bits (1573), Expect = e-172
 Identities = 329/468 (70%), Positives = 365/468 (77%), Gaps = 2/468 (0%)
 Frame = -1

Query: 1906 NENNVLKEDDSNADDMEEDIDGDMADIENLNYDDLDSVSKLQKSQRYVDIMQKVEDALQK 1727
            NE  + +++D +A DMEED+DGD+AD+ENLNYDDLDSVSKLQK+QRY DI+QKVE+AL K
Sbjct: 18   NEAEIPEDNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQKTQRYTDIIQKVEEALHK 77

Query: 1726 --GNMSNQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHP 1553
                +  Q   +EDDPEYQLIVDCNALSVDIENEIVI+HNFIRD YRLKFPELESLVHHP
Sbjct: 78   KESEVLFQVVDIEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHP 137

Query: 1552 IDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXX 1373
            IDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L KT+      
Sbjct: 138  IDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTVEACDRA 197

Query: 1372 XXXXXAKKEVLDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGA 1193
                 AKK+VLDFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL++LAKMPACNVQLLGA
Sbjct: 198  LDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGA 257

Query: 1192 KKKTLAGFSTASSQLHVGFVEQTEIFQSTPPSLRNRACRLVAAKATLAARVDSIRGDPTG 1013
            KKK LAGFSTA+SQ  VG++EQTEIFQ+TPPSLR RACRL+AAK+TLAARVDSIRGDP+G
Sbjct: 258  KKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAKSTLAARVDSIRGDPSG 317

Query: 1012 KTGRTLRDEIRKKIEKWQEXXXXXXXXXXXXPDSDPXXXXXXXXXXXXXXRYAVTDMRKL 833
            KTGR  +DEI KKIEKWQE            PDS+P              RYA+TDMRKL
Sbjct: 318  KTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRKL 377

Query: 832  ANRMQFGVPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLXXXXXXXXXXKHFXXXXX 653
            ANRMQFGVPEESS               GSGKLRVS+GQS+L          K++     
Sbjct: 378  ANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKVAKKFKEKNYGSSGA 437

Query: 652  XXXXXXXXAFTPVQGIELTNPQAHANQLGSGTQSTYFSEIGTFSKIRR 509
                    AFTPVQGIELTNPQAHA+QLGSGTQSTYFSE GTFSKI+R
Sbjct: 438  TSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFSKIKR 485


>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine
            max]
          Length = 486

 Score =  608 bits (1568), Expect = e-171
 Identities = 327/468 (69%), Positives = 365/468 (77%), Gaps = 2/468 (0%)
 Frame = -1

Query: 1906 NENNVLKEDDSNADDMEEDIDGDMADIENLNYDDLDSVSKLQKSQRYVDIMQKVEDALQK 1727
            NE  + +++D +A DMEED+DGD+AD+ENLNYDDLDSVSKLQK+QRY D++QKVE+AL K
Sbjct: 18   NEAEIPEDNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQKTQRYTDVIQKVEEALNK 77

Query: 1726 --GNMSNQGFVLEDDPEYQLIVDCNALSVDIENEIVIVHNFIRDNYRLKFPELESLVHHP 1553
                +  Q   +EDDPEYQLIVDCNALSVDIENEIVI+HNFIRD YRLKFPELESLVHHP
Sbjct: 78   KESEVLFQVVDIEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHP 137

Query: 1552 IDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLRKTIXXXXXX 1373
            IDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L KT+      
Sbjct: 138  IDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTVEACDRA 197

Query: 1372 XXXXXAKKEVLDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGA 1193
                 AKK+VLDFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL++LAKMPACNVQLLGA
Sbjct: 198  LDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGA 257

Query: 1192 KKKTLAGFSTASSQLHVGFVEQTEIFQSTPPSLRNRACRLVAAKATLAARVDSIRGDPTG 1013
            KKK LAGFSTA+SQ  VG++EQTEIFQ+TPPSLR RACRL+AAK+TLAARVDSIRGDP+G
Sbjct: 258  KKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAKSTLAARVDSIRGDPSG 317

Query: 1012 KTGRTLRDEIRKKIEKWQEXXXXXXXXXXXXPDSDPXXXXXXXXXXXXXXRYAVTDMRKL 833
            KTGR  +DEI KKIEKWQE            PDS+P              RYA+TDMRKL
Sbjct: 318  KTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRKL 377

Query: 832  ANRMQFGVPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLXXXXXXXXXXKHFXXXXX 653
            ANRMQFGVPEESS               GSGKLRVS+GQS+L          K++     
Sbjct: 378  ANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKVAKKFKEKNYGSSGA 437

Query: 652  XXXXXXXXAFTPVQGIELTNPQAHANQLGSGTQSTYFSEIGTFSKIRR 509
                    AFTPVQGIEL+NPQAHA+QLGSGTQSTYFSE GTFSKI+R
Sbjct: 438  TSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSKIKR 485