BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002200
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   331   2e-88
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              331   2e-88
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   331   2e-88
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   319   1e-84
ref|XP_002325903.1| predicted membrane protein [Populus trichoca...   315   2e-83

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  331 bits (849), Expect = 2e-88
 Identities = 188/268 (70%), Positives = 205/268 (76%)
 Frame = -1

Query: 989 VESSKDLSNRSLRDLGRRSKIAIDLNENEAVGEKIDTESILKDTTHIDLSDTVGLGVLDA 810
           V  S+  +N S+ DLGRRSKI ++  E E  G+K D +SI      +DLS   GLGV DA
Sbjct: 29  VALSQGETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSI-----SLDLSLDSGLGVFDA 83

Query: 809 FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLIS 630
           FFASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLIS
Sbjct: 84  FFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLIS 143

Query: 629 RKHTNSAATVLYAFFGMRLLYIAWRSGSKNSQXXXXXXXXXXXETQQGKXXXXXXXXXXX 450
           RKHTNSAATVLYAFFG+RLLYIAWRS SK SQ           E+ QGK           
Sbjct: 144 RKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFC 203

Query: 449 TPIFLEAFVLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLAS 270
           TPIFLE+F+LTFLAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLAS
Sbjct: 204 TPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLAS 263

Query: 269 KISQGTVATIXXXXXXXXXXXXXXYPPL 186
           KISQGTVAT+              YPPL
Sbjct: 264 KISQGTVATVGGLLFLGFSLSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  331 bits (849), Expect = 2e-88
 Identities = 188/268 (70%), Positives = 205/268 (76%)
 Frame = -1

Query: 989 VESSKDLSNRSLRDLGRRSKIAIDLNENEAVGEKIDTESILKDTTHIDLSDTVGLGVLDA 810
           V  S+  +N S+ DLGRRSKI ++  E E  G+K D +SI      +DLS   GLGV DA
Sbjct: 29  VALSQGETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSI-----SLDLSLDSGLGVFDA 83

Query: 809 FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLIS 630
           FFASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLIS
Sbjct: 84  FFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLIS 143

Query: 629 RKHTNSAATVLYAFFGMRLLYIAWRSGSKNSQXXXXXXXXXXXETQQGKXXXXXXXXXXX 450
           RKHTNSAATVLYAFFG+RLLYIAWRS SK SQ           E+ QGK           
Sbjct: 144 RKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFC 203

Query: 449 TPIFLEAFVLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLAS 270
           TPIFLE+F+LTFLAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLAS
Sbjct: 204 TPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLAS 263

Query: 269 KISQGTVATIXXXXXXXXXXXXXXYPPL 186
           KISQGTVAT+              YPPL
Sbjct: 264 KISQGTVATVGGLLFLGFSLSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  331 bits (849), Expect = 2e-88
 Identities = 188/268 (70%), Positives = 205/268 (76%)
 Frame = -1

Query: 989 VESSKDLSNRSLRDLGRRSKIAIDLNENEAVGEKIDTESILKDTTHIDLSDTVGLGVLDA 810
           V  S+  +N S+ DLGRRSKI ++  E E  G+K D +SI      +DLS   GLGV DA
Sbjct: 29  VALSQGETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSI-----SLDLSLDSGLGVFDA 83

Query: 809 FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLIS 630
           FFASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLIS
Sbjct: 84  FFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLIS 143

Query: 629 RKHTNSAATVLYAFFGMRLLYIAWRSGSKNSQXXXXXXXXXXXETQQGKXXXXXXXXXXX 450
           RKHTNSAATVLYAFFG+RLLYIAWRS SK SQ           E+ QGK           
Sbjct: 144 RKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFC 203

Query: 449 TPIFLEAFVLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLAS 270
           TPIFLE+F+LTFLAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLAS
Sbjct: 204 TPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLAS 263

Query: 269 KISQGTVATIXXXXXXXXXXXXXXYPPL 186
           KISQGTVAT+              YPPL
Sbjct: 264 KISQGTVATVGGLLFLGFSLSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  319 bits (817), Expect = 1e-84
 Identities = 182/282 (64%), Positives = 205/282 (72%)
 Frame = -1

Query: 1031 IILLVSAVGAQEGGVESSKDLSNRSLRDLGRRSKIAIDLNENEAVGEKIDTESILKDTTH 852
            ++L +  + AQ+  VE+ K+ S  S++DLGRR  I               T+ I  ++ +
Sbjct: 16   LLLGLPLIAAQDSLVENEKEESTASIKDLGRRGMIV--------------TKDIDGNSVN 61

Query: 851  IDLSDTVGLGVLDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTV 672
            + L    GLGV DAF ASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL+VMTV
Sbjct: 62   LGLHVDSGLGVFDAFIASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTV 121

Query: 671  LSTGLGRIVPNLISRKHTNSAATVLYAFFGMRLLYIAWRSGSKNSQXXXXXXXXXXXETQ 492
            LSTGLGRIVPNLISRKHTNSAATVLYAFFG+RLLYIAWRS SK SQ           E+ 
Sbjct: 122  LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKVSQKKEMEEVEEKLESG 181

Query: 491  QGKXXXXXXXXXXXTPIFLEAFVLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTI 312
            QGK           TPIFLE+F+LTFLAEWGDRSQIATIALATHKNAIGVAVGAT+GHTI
Sbjct: 182  QGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTI 241

Query: 311  CTSIAVVGGSMLASKISQGTVATIXXXXXXXXXXXXXXYPPL 186
            CTS+AVVGGSMLASKISQGTVATI              YPPL
Sbjct: 242  CTSLAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 283


>ref|XP_002325903.1| predicted membrane protein [Populus trichocarpa]
            gi|222862778|gb|EEF00285.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 284

 Score =  315 bits (806), Expect = 2e-83
 Identities = 181/297 (60%), Positives = 208/297 (70%), Gaps = 6/297 (2%)
 Frame = -1

Query: 1058 GFSGYTVFLIILLVSAVG------AQEGGVESSKDLSNRSLRDLGRRSKIAIDLNENEAV 897
            GF     F+I+++ +AV       +     + ++   +RS +DLGRR  +  + ++ ++ 
Sbjct: 2    GFRSNPRFIILVVAAAVLLLLLSLSHTAAAQENEGDESRSFQDLGRRGMVVRNGDDAKSA 61

Query: 896  GEKIDTESILKDTTHIDLSDTVGLGVLDAFFASLSMILVSEIGDETFIIAALMAMRHPKS 717
            G  +  ES              GLG+ DAFFASLSMILVSEIGDETFIIAALMAMRHPKS
Sbjct: 62   GNGLKLES--------------GLGIFDAFFASLSMILVSEIGDETFIIAALMAMRHPKS 107

Query: 716  IVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGMRLLYIAWRSGSKNS 537
             VLSGAL+AL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFG+RLLYIAWRS SK+S
Sbjct: 108  TVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKSS 167

Query: 536  QXXXXXXXXXXXETQQGKXXXXXXXXXXXTPIFLEAFVLTFLAEWGDRSQIATIALATHK 357
            Q           E  QGK           TPIFLE+F+LTFLAEWGDRSQIATIALATHK
Sbjct: 168  QKKEMEEVEEKLEAGQGKTSFRRYFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHK 227

Query: 356  NAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATIXXXXXXXXXXXXXXYPPL 186
            NAIGVAVGATLGHTICTS+AVVGGS+LASKISQGTVATI              YPPL
Sbjct: 228  NAIGVAVGATLGHTICTSLAVVGGSLLASKISQGTVATIGGLLFLCFSLSSYFYPPL 284