BLASTX nr result

ID: Cimicifuga21_contig00002125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002125
         (1708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    50   3e-10
emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulga...    47   5e-08
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    42   9e-07
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    42   5e-06

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 50.4 bits (119), Expect(2) = 3e-10
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = +1

Query: 589 LASLLGKLVCLDEATAEKLRVKFVKLCVEVDINIKFPK--VLKARIGGDDIEEIKVEYPW 762
           + S +G  +  DE TA+KLRV +V++ VEVDI  K  +   +  R GG  I++I VEY W
Sbjct: 222 IGSAIGNPLITDECTAQKLRVSYVRILVEVDITQKLVEEITISDRTGG-KIKQI-VEYEW 279

Query: 763 VPVSCSRC 786
            P  C +C
Sbjct: 280 KPEFCEKC 287



 Score = 42.4 bits (98), Expect(2) = 3e-10
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +3

Query: 465 IVIKAWSPEVEKKKKLISTIPIWAKLDQVPKQLWTEDGLGVFSKFVG 605
           I++K W+P+    K L  T+PIW KL Q+P  LW    L      +G
Sbjct: 181 IILKEWTPDFNLSKDLEKTMPIWVKLPQLPLCLWGLKSLNKIGSAIG 227


>emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 390

 Score = 47.4 bits (111), Expect(2) = 5e-08
 Identities = 21/68 (30%), Positives = 38/68 (55%)
 Frame = +1

Query: 589 LASLLGKLVCLDEATAEKLRVKFVKLCVEVDINIKFPKVLKARIGGDDIEEIKVEYPWVP 768
           + S+LG  +  DE T++ LRV + ++ VE+D+  + P  +        + + K+EY WVP
Sbjct: 197 IGSVLGVPLYADECTSKGLRVSYARMLVEMDVTQEIPITVAVEDPNGVVFKQKLEYDWVP 256

Query: 769 VSCSRCNL 792
             C +C +
Sbjct: 257 HFCKKCQM 264



 Score = 37.7 bits (86), Expect(2) = 5e-08
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 465 IVIKAWSPEVEKKKKLISTIPIWAKLDQVPKQLWTEDGLGVFSKFVG 605
           +++K WS      +++   IPIW KL  +P   W ED L      +G
Sbjct: 156 MIVKQWSANFNFHEEVQKVIPIWVKLPNLPLNCWGEDSLSRIGSVLG 202


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 42.4 bits (98), Expect(2) = 9e-07
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 589 LASLLGKLVCLDEATAEKLRVKFVKLCVEVDINIKFPKVLKARIGGDDIEEIKVEYPWVP 768
           +ASL+G+ +  D  TA +  + F ++CVEVD +   P  +          + KVEY W P
Sbjct: 147 IASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQP 206

Query: 769 VS-CSRC 786
            S CS C
Sbjct: 207 TSRCSYC 213



 Score = 38.5 bits (88), Expect(2) = 9e-07
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +3

Query: 468 VIKAWSPEVEKKKKLISTIPIWAKLDQVPKQLWTEDGLGVFSKFVGQ 608
           ++K WS ++  + K + + PIW KL  +   LW+ + LG  +  VG+
Sbjct: 107 ILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLWSPEALGKIASLVGR 153


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 42.4 bits (98), Expect(2) = 5e-06
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 589 LASLLGKLVCLDEATAEKLRVKFVKLCVEVDINIKFPKVLKARIGGDDIEEIKVEYPWVP 768
           +ASL+G+ +  D  TA +  + F ++CVEVD +   P  +          + KVEY W P
Sbjct: 147 IASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQP 206

Query: 769 VS-CSRC 786
            S CS C
Sbjct: 207 TSRCSYC 213



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 468 VIKAWSPEVEKKKKLISTIPIWAKLDQVPKQLWTEDGLGVFSKFVGQ 608
           ++K WS ++  + K + + P+W KL  +   LW+ + L   +  VG+
Sbjct: 107 ILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLWSPEALSKIASLVGR 153


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