BLASTX nr result
ID: Cimicifuga21_contig00002104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00002104
(738 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi... 151 1e-59
ref|XP_002529941.1| Auxin response factor, putative [Ricinus com... 147 1e-57
emb|CBI16322.3| unnamed protein product [Vitis vinifera] 151 2e-57
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2... 145 3e-56
ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|2... 144 3e-56
>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 151 bits (382), Expect(3) = 1e-59
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +1
Query: 1 PESVIEAATLAENGQPFEVVYYPRASTPELCVKASSVMEVTRVQWSSGMRFKMAFETKDS 180
PESV+EAATLA NGQPFEVVYYPRASTPE CVKAS V R+QW SGMRFKM FET+DS
Sbjct: 271 PESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDS 330
Query: 181 SRISWFMGTVSSVQISDPIRWPASSW 258
SRISWFMGT+SSVQ++DPIRWP S W
Sbjct: 331 SRISWFMGTISSVQVADPIRWPNSPW 356
Score = 70.5 bits (171), Expect(3) = 1e-59
Identities = 44/116 (37%), Positives = 56/116 (48%), Gaps = 29/116 (25%)
Frame = +2
Query: 467 PFSPPRKKMRLPQHPDFPFDGQFPI-----------------------------XXXXXX 559
PFSPPRKK+R+PQHPDFPFDGQFP+
Sbjct: 393 PFSPPRKKLRIPQHPDFPFDGQFPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGI 452
Query: 560 XXXXXXXXXKLQPGLFQTDIQRFHHNAPPPSKMSSCIFMEKRQNSDENVSCLLTMG 727
KLQ GLF T QRF + S++++ I R+N +E++SCLLTMG
Sbjct: 453 SLSDLHLNNKLQSGLFPTSFQRFDQH----SRITNGIITAHRKN-NESISCLLTMG 503
Score = 55.8 bits (133), Expect(3) = 1e-59
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 378 KVT*DEPDLLQNVKRVSPWLV*LVSNMPAVH 470
+VT DEPDLLQNVKRVSPWLV LVSNMP +H
Sbjct: 360 QVTWDEPDLLQNVKRVSPWLVELVSNMPIIH 390
>ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor,
putative [Ricinus communis]
Length = 709
Score = 147 bits (370), Expect(3) = 1e-57
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +1
Query: 4 ESVIEAATLAENGQPFEVVYYPRASTPELCVKASSVMEVTRVQWSSGMRFKMAFETKDSS 183
E V+E+A LA NGQPFEVVYYPRASTPE CVKASSV TR+QW SGMRFKMAFET+DSS
Sbjct: 272 EEVLESAALAANGQPFEVVYYPRASTPEFCVKASSVRASTRIQWCSGMRFKMAFETEDSS 331
Query: 184 RISWFMGTVSSVQISDPIRWPASSW 258
RISWFMGT++SVQ++DPIRWP S W
Sbjct: 332 RISWFMGTIASVQVADPIRWPNSPW 356
Score = 67.8 bits (164), Expect(3) = 1e-57
Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 28/115 (24%)
Frame = +2
Query: 467 PFSPPRKKMRLPQHPDFPFDGQFPI----------------------------XXXXXXX 562
PFSPPRKK+RLPQH DFP DGQF +
Sbjct: 393 PFSPPRKKLRLPQHLDFPLDGQFQLPSFSGNPLGPSSPLCCLSDNTPAGIQGARHAQFGI 452
Query: 563 XXXXXXXXKLQPGLFQTDIQRFHHNAPPPSKMSSCIFMEKRQNSDENVSCLLTMG 727
KLQ GLF + +QRF+ + S++S FM+ NS+EN+SCLLTMG
Sbjct: 453 SLSDLQLNKLQSGLFLSSLQRFNSH----SRVSES-FMKSNTNSNENLSCLLTMG 502
Score = 56.2 bits (134), Expect(3) = 1e-57
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 378 KVT*DEPDLLQNVKRVSPWLV*LVSNMPAVH 470
+VT DEPDLLQNVKRVSPWLV LVSNMP +H
Sbjct: 360 QVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 390
>emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 151 bits (382), Expect(3) = 2e-57
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +1
Query: 1 PESVIEAATLAENGQPFEVVYYPRASTPELCVKASSVMEVTRVQWSSGMRFKMAFETKDS 180
PESV+EAATLA NGQPFEVVYYPRASTPE CVKAS V R+QW SGMRFKM FET+DS
Sbjct: 156 PESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDS 215
Query: 181 SRISWFMGTVSSVQISDPIRWPASSW 258
SRISWFMGT+SSVQ++DPIRWP S W
Sbjct: 216 SRISWFMGTISSVQVADPIRWPNSPW 241
Score = 62.8 bits (151), Expect(3) = 2e-57
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 467 PFSPPRKKMRLPQHPDFPFDGQFPIXXXXXXXXXXXXXXXKLQPGLFQTDIQRFHHNAPP 646
PFSPPRKK+R+PQHPDFPFDGQFP+ L P IQ H A
Sbjct: 278 PFSPPRKKLRIPQHPDFPFDGQFPMSSFSSNPLGSSSPLCCL-PDNTPAGIQGARH-AQY 335
Query: 647 PSKMSSCIFMEKRQN---SDENVSCLLTMG 727
+S K Q+ ++E++SCLLTMG
Sbjct: 336 GISLSDLHLNNKLQSGLKNNESISCLLTMG 365
Score = 55.8 bits (133), Expect(3) = 2e-57
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 378 KVT*DEPDLLQNVKRVSPWLV*LVSNMPAVH 470
+VT DEPDLLQNVKRVSPWLV LVSNMP +H
Sbjct: 245 QVTWDEPDLLQNVKRVSPWLVELVSNMPIIH 275
>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
predicted protein [Populus trichocarpa]
Length = 671
Score = 145 bits (367), Expect(3) = 3e-56
Identities = 67/86 (77%), Positives = 74/86 (86%)
Frame = +1
Query: 1 PESVIEAATLAENGQPFEVVYYPRASTPELCVKASSVMEVTRVQWSSGMRFKMAFETKDS 180
PESVIEAA+LA NGQPFEVVYYPRASTPE CV+AS+V +QW GMRFKMAFET+DS
Sbjct: 262 PESVIEAASLAANGQPFEVVYYPRASTPEFCVRASAVRTAMHIQWCPGMRFKMAFETEDS 321
Query: 181 SRISWFMGTVSSVQISDPIRWPASSW 258
SRISWFMGT+SSVQ +DPIRWP S W
Sbjct: 322 SRISWFMGTISSVQFADPIRWPNSPW 347
Score = 66.2 bits (160), Expect(3) = 3e-56
Identities = 46/115 (40%), Positives = 52/115 (45%), Gaps = 28/115 (24%)
Frame = +2
Query: 467 PFSPPRKKMRLPQHPDFPFDGQFPI----------------------------XXXXXXX 562
PFSPPRKK+RLPQ PDFP GQ P+
Sbjct: 384 PFSPPRKKLRLPQPPDFPLLGQIPMPSFTGIPLRSNSPLCCVSDNIPAGIQGARHAQFEL 443
Query: 563 XXXXXXXXKLQPGLFQTDIQRFHHNAPPPSKMSSCIFMEKRQNSDENVSCLLTMG 727
KLQ GLF D QR H A PS++SS FM + S EN+SCLLTMG
Sbjct: 444 SSSDLHFNKLQSGLFPVDFQRRDH-AASPSRISSGNFMGNTKKS-ENISCLLTMG 496
Score = 54.3 bits (129), Expect(3) = 3e-56
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 378 KVT*DEPDLLQNVKRVSPWLV*LVSNMPAVH 470
+V DEPDLLQNVKRVSPWL LVSNMPA+H
Sbjct: 351 QVAWDEPDLLQNVKRVSPWLAELVSNMPAIH 381
>ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|222865410|gb|EEF02541.1|
predicted protein [Populus trichocarpa]
Length = 669
Score = 144 bits (364), Expect(3) = 3e-56
Identities = 66/85 (77%), Positives = 74/85 (87%)
Frame = +1
Query: 4 ESVIEAATLAENGQPFEVVYYPRASTPELCVKASSVMEVTRVQWSSGMRFKMAFETKDSS 183
ESVIEAA+LA NGQPFE VYYPRASTPE CVKAS+V ++QW GMRFKMAFET+DSS
Sbjct: 262 ESVIEAASLAANGQPFEAVYYPRASTPEFCVKASAVRSAIQIQWCPGMRFKMAFETEDSS 321
Query: 184 RISWFMGTVSSVQISDPIRWPASSW 258
RISWFMGT+SSVQ++DPIRWP S W
Sbjct: 322 RISWFMGTISSVQVADPIRWPNSPW 346
Score = 67.4 bits (163), Expect(3) = 3e-56
Identities = 45/115 (39%), Positives = 53/115 (46%), Gaps = 28/115 (24%)
Frame = +2
Query: 467 PFSPPRKKMRLPQHPDFPFDGQFPI----------------------------XXXXXXX 562
PFSPPRKK+RLPQ PDFP GQ P+
Sbjct: 383 PFSPPRKKLRLPQPPDFPLLGQIPMPSFTGNPLRSNSPLCCVSDNIPAGIQGARHAQFGL 442
Query: 563 XXXXXXXXKLQPGLFQTDIQRFHHNAPPPSKMSSCIFMEKRQNSDENVSCLLTMG 727
KLQ GLF D QR A PPS++S+ F+ QNS E++SCLLTMG
Sbjct: 443 SSSDLHFNKLQAGLFPVDFQRL-DRAAPPSRISNSNFVGNTQNS-ESISCLLTMG 495
Score = 53.9 bits (128), Expect(3) = 3e-56
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 378 KVT*DEPDLLQNVKRVSPWLV*LVSNMPAVH 470
+V DEPDLL NVKRVSPWLV LVSNMPA+H
Sbjct: 350 QVAWDEPDLLHNVKRVSPWLVELVSNMPAIH 380