BLASTX nr result

ID: Cimicifuga21_contig00002103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002103
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   175   4e-42
ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cu...   174   7e-42
ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   173   2e-41
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-41
ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...   171   1e-40

>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  175 bits (444), Expect = 4e-42
 Identities = 84/125 (67%), Positives = 99/125 (79%)
 Frame = -3

Query: 410 LPFGGYSAFLREDERKIMRXXXXXXXXXXXSFKVKGKVRPESVIEAATLAANGQPFEVVY 231
           +P+GG+SAFLREDE K+M+           S   KGKV PESV EAATLAANGQPFEVVY
Sbjct: 245 VPYGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVY 304

Query: 230 YPRASTPEFCVKASSVMEATRVQWSSGMRFKMAFETKDSSRISWFIGTVSSVQISDPIRW 51
           YPRASTPEFCVKAS V  A +++W  GMRFKMAFET+DSSRISWF+GT+SSVQ+++P+RW
Sbjct: 305 YPRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRW 364

Query: 50  LASSW 36
             S W
Sbjct: 365 PESPW 369


>ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
           gi|449531181|ref|XP_004172566.1| PREDICTED: auxin
           response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  174 bits (442), Expect = 7e-42
 Identities = 83/124 (66%), Positives = 98/124 (79%)
 Frame = -3

Query: 407 PFGGYSAFLREDERKIMRXXXXXXXXXXXSFKVKGKVRPESVIEAATLAANGQPFEVVYY 228
           P+GG + FLR+D+ K+ R           + + KGKVRPESV+EAA LAA+GQPFEVVYY
Sbjct: 237 PYGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAASGQPFEVVYY 296

Query: 227 PRASTPEFCVKASSVMEATRVQWSSGMRFKMAFETKDSSRISWFIGTVSSVQISDPIRWL 48
           PRASTPEFCVKASSV  A R+QW SGMRFKM FET+DSSRISWF+GT+SSVQ++DPIRW 
Sbjct: 297 PRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWP 356

Query: 47  ASSW 36
            S W
Sbjct: 357 NSPW 360


>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  173 bits (439), Expect = 2e-41
 Identities = 85/128 (66%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
 Frame = -3

Query: 413 ALPFGGYSAFLREDERKIMRXXXXXXXXXXXSFKVKG--KVRPESVIEAATLAANGQPFE 240
           A P+ G+  FLREDE K+MR              ++G  +VRPESV+EAATLAANGQPFE
Sbjct: 229 ASPYAGFPKFLREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFE 288

Query: 239 VVYYPRASTPEFCVKASSVMEATRVQWSSGMRFKMAFETKDSSRISWFIGTVSSVQISDP 60
           VVYYPRASTPEFCVKAS V  A R+QW SGMRFKM FET+DSSRISWF+GT+SSVQ++DP
Sbjct: 289 VVYYPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADP 348

Query: 59  IRWLASSW 36
           IRW  S W
Sbjct: 349 IRWPNSPW 356


>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  172 bits (436), Expect = 4e-41
 Identities = 85/123 (69%), Positives = 96/123 (78%)
 Frame = -3

Query: 404 FGGYSAFLREDERKIMRXXXXXXXXXXXSFKVKGKVRPESVIEAATLAANGQPFEVVYYP 225
           FGGYS FLREDE K+ R              +KGKV+PESVIEAA+LAANGQPFEVVYYP
Sbjct: 233 FGGYSGFLREDESKLTRRNGNGD--------MKGKVKPESVIEAASLAANGQPFEVVYYP 284

Query: 224 RASTPEFCVKASSVMEATRVQWSSGMRFKMAFETKDSSRISWFIGTVSSVQISDPIRWLA 45
           RASTPEFCV+AS+V  A  +QW  GMRFKMAFET+DSSRISWF+GT+SSVQ +DPIRW  
Sbjct: 285 RASTPEFCVRASAVRTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPN 344

Query: 44  SSW 36
           S W
Sbjct: 345 SPW 347


>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  171 bits (432), Expect = 1e-40
 Identities = 81/133 (60%), Positives = 100/133 (75%)
 Frame = -3

Query: 434 NTHQCHIALPFGGYSAFLREDERKIMRXXXXXXXXXXXSFKVKGKVRPESVIEAATLAAN 255
           N   C+  +P+GG+SAFLREDE K+ R           SF  + KV  E+VIEA  LA N
Sbjct: 235 NPAGCNYVMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVN 294

Query: 254 GQPFEVVYYPRASTPEFCVKASSVMEATRVQWSSGMRFKMAFETKDSSRISWFIGTVSSV 75
           GQPFEV+YYPRASTPEFCVK+S V  A++++W SGMRFKMAFET+DSSRISWF+GT+SSV
Sbjct: 295 GQPFEVIYYPRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSV 354

Query: 74  QISDPIRWLASSW 36
           Q++DP+RW  S W
Sbjct: 355 QVADPVRWPDSPW 367


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