BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002092
         (1823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513582.1| polypyrimidine tract binding protein, putati...   622   e-176
ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding prot...   621   e-175
emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]   621   e-175
gb|ABK95840.1| unknown [Populus trichocarpa]                          614   e-173
ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|2...   605   e-170

>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
            gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
            protein, putative [Ricinus communis]
          Length = 447

 Score =  622 bits (1605), Expect = e-176
 Identities = 321/445 (72%), Positives = 350/445 (78%), Gaps = 2/445 (0%)
 Frame = +3

Query: 195  MTSTSSQPQFRYTQPPSKVLHLRNCPWECTDEELIELGKPFGKVVNTKCNVGANRNQAFI 374
            M S SSQPQFR TQPPSKVLHLRN PWECT+EELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1    MASVSSQPQFRLTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 375  EFADLNQAIAMIXXXXXXXDPAQLRGKTVYLQYSNRQEIVHNKTSGDVTGNVLLVTIEGV 554
            EF DLNQAIAMI       +PAQ+RGKTVYLQYSNRQEIV+NKT+ DV GNVLLVTIEG 
Sbjct: 61   EFMDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGA 120

Query: 555  EAQNVSIDVLHLVFSAFGYVQKIATFEKTAGFQALVQFSDQESASTAKNTLDSRSIPSYL 734
            +A+ VSIDVLHLVFSAFG+V KI TFEKTAGFQALVQFSD E+AS+AKN LD R+IP YL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYL 180

Query: 735  LPEHVSTCTLKITFSGHTDLNVKFQSHRSRDYTNPLLPVAPSAIDGSGQFAVGLDGK--E 908
            LPEH+  CTL+IT+S HTDL+VKFQSHRSRDYTNP LPVAPSAIDGSG F VGLDGK  E
Sbjct: 181  LPEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLE 240

Query: 909  QESNVLLASIENMQYLVNVDTLYTVFSTFGPVQKIAMFEKNAGTHALVQYPDAQTAYVAK 1088
             ESNVLLASIENMQY V +D L+ VFS FGPVQKIAMF+KN G  AL+QYPD QTA VAK
Sbjct: 241  PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 300

Query: 1089 EALEGHSIYDGGFCKLRLSYSRHTDLSVKVNNDRSRDYTTPNLYMLNSQPSLLGQQPSYP 1268
            EALEGH IYDGGFCKL +SYSRH+DLS+KVNNDRSRDYT PN  M+N QPS+LGQQP  P
Sbjct: 301  EALEGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQP-VP 359

Query: 1269 MPGHTAPLYSGPQYAPPAANEVNGGPRPIAGWGMNTTAMPQPMAHQFPNAAYMPPPGTMH 1448
              G  A  YSG Q+AP   + V   P+P AGW     A P  M  Q  N  Y  P G M 
Sbjct: 360  TVGPPAHPYSGAQFAPHTEHPVM--PQPSAGWTAAVPAGPHSMPPQMNNHPYF-PSGAMP 416

Query: 1449 YDMGPSVVQMPGQNGQPPVMATPPY 1523
              MGP ++QMPG  G       PPY
Sbjct: 417  PQMGPGMMQMPGHTGIQQGAPMPPY 441


>ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like [Vitis
            vinifera]
          Length = 446

 Score =  621 bits (1601), Expect = e-175
 Identities = 323/453 (71%), Positives = 356/453 (78%), Gaps = 8/453 (1%)
 Frame = +3

Query: 195  MTSTSSQPQFRYTQPPSKVLHLRNCPWECTDEELIELGKPFGKVVNTKCNVGANRNQAFI 374
            M S SSQPQFRYTQPPSKVLHLRN PWECT+EELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1    MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 375  EFADLNQAIAMIXXXXXXXDPAQLRGKTVYLQYSNRQEIVHNKTSGDVTGNVLLVTIEGV 554
            EFADLNQAIAMI       +PAQ+RGKTVYLQYSNRQEIV+NKTS DV GNVLLVTIEG 
Sbjct: 61   EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGA 120

Query: 555  EAQNVSIDVLHLVFSAFGYVQKIATFEKTAGFQALVQFSDQESASTAKNTLDSRSIPSYL 734
            +A+ VSIDVLHLVFSAFG+V KI TFEKTAGFQALVQFSD E+AS AKN LD RSIP YL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYL 180

Query: 735  LPEHVSTCTLKITFSGHTDLNVKFQSHRSRDYTNPLLPVAPSAIDGSGQFAVGLDGK--E 908
            LPEH+  CTL+ITFS HTDL+VKFQSHRSRDYTNP LPVA SAIDGSGQF++G DG+  E
Sbjct: 181  LPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVE 240

Query: 909  QESNVLLASIENMQYLVNVDTLYTVFSTFGPVQKIAMFEKNAGTHALVQYPDAQTAYVAK 1088
             ESNVLLASIENMQY V +D L+ VFS FGP+QKIAMF+KN G  AL+QYPD QTA VAK
Sbjct: 241  PESNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAK 300

Query: 1089 EALEGHSIYDGGFCKLRLSYSRHTDLSVKVNNDRSRDYTTPNLYMLNSQPSLLGQQPSYP 1268
            EALEGH IYDGGFCKL +SYSRHTDLS+KVNNDRSRDYT+P   +L+SQPS+LGQQP  P
Sbjct: 301  EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTSP---VLSSQPSVLGQQP-VP 356

Query: 1269 MPGHTAPLYSGPQYAPPAANEVNGGPRPIAGWGMNTTAM------PQPMAHQFPNAAYMP 1430
            +PG +   + G QYA P+   V    +P AGW  +  A       PQ M  Q  N  YM 
Sbjct: 357  IPGPSTHQFEGAQYASPSDQPVI--HQPSAGWATSAAAAGAPPPPPQSMPMQQHNHPYM- 413

Query: 1431 PPGTMHYDMGPSVVQMPGQNGQPPVMATPPYGH 1529
            PPGTM     P ++ M  Q G P   A PPY H
Sbjct: 414  PPGTMPPQPVPGMMPMQTQTGLPQSAAMPPYSH 446


>emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
          Length = 755

 Score =  621 bits (1601), Expect = e-175
 Identities = 323/453 (71%), Positives = 356/453 (78%), Gaps = 8/453 (1%)
 Frame = +3

Query: 195  MTSTSSQPQFRYTQPPSKVLHLRNCPWECTDEELIELGKPFGKVVNTKCNVGANRNQAFI 374
            M S SSQPQFRYTQPPSKVLHLRN PWECT+EELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 310  MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 369

Query: 375  EFADLNQAIAMIXXXXXXXDPAQLRGKTVYLQYSNRQEIVHNKTSGDVTGNVLLVTIEGV 554
            EFADLNQAIAMI       +PAQ+RGKTVYLQYSNRQEIV+NKTS DV GNVLLVTIEG 
Sbjct: 370  EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGA 429

Query: 555  EAQNVSIDVLHLVFSAFGYVQKIATFEKTAGFQALVQFSDQESASTAKNTLDSRSIPSYL 734
            +A+ VSIDVLHLVFSAFG+V KI TFEKTAGFQALVQFSD E+AS AKN LD RSIP YL
Sbjct: 430  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYL 489

Query: 735  LPEHVSTCTLKITFSGHTDLNVKFQSHRSRDYTNPLLPVAPSAIDGSGQFAVGLDGK--E 908
            LPEH+  CTL+ITFS HTDL+VKFQSHRSRDYTNP LPVA SAIDGSGQF++G DG+  E
Sbjct: 490  LPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVE 549

Query: 909  QESNVLLASIENMQYLVNVDTLYTVFSTFGPVQKIAMFEKNAGTHALVQYPDAQTAYVAK 1088
             ESNVLLASIENMQY V +D L+ VFS FGP+QKIAMF+KN G  AL+QYPD QTA VAK
Sbjct: 550  PESNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAK 609

Query: 1089 EALEGHSIYDGGFCKLRLSYSRHTDLSVKVNNDRSRDYTTPNLYMLNSQPSLLGQQPSYP 1268
            EALEGH IYDGGFCKL +SYSRHTDLS+KVNNDRSRDYT+P   +L+SQPS+LGQQP  P
Sbjct: 610  EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTSP---VLSSQPSVLGQQP-VP 665

Query: 1269 MPGHTAPLYSGPQYAPPAANEVNGGPRPIAGWGMNTTAM------PQPMAHQFPNAAYMP 1430
            +PG +   + G QYA P+   V    +P AGW  +  A       PQ M  Q  N  YM 
Sbjct: 666  IPGPSTHQFEGAQYASPSDQPVI--HQPSAGWATSAAAAGAPPPPPQSMPMQQHNHPYM- 722

Query: 1431 PPGTMHYDMGPSVVQMPGQNGQPPVMATPPYGH 1529
            PPGTM     P ++ M  Q G P   A PPY H
Sbjct: 723  PPGTMPPQPVPGMMPMQTQTGLPQSAAMPPYSH 755


>gb|ABK95840.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  614 bits (1583), Expect = e-173
 Identities = 314/449 (69%), Positives = 350/449 (77%), Gaps = 4/449 (0%)
 Frame = +3

Query: 195  MTSTSSQPQFRYTQPPSKVLHLRNCPWECTDEELIELGKPFGKVVNTKCNVGANRNQAFI 374
            M+S SSQPQFR TQPPSKVLHLRN PWECT+EEL+ELGKPFGKVVNTKCNVG NRNQAFI
Sbjct: 1    MSSVSSQPQFRLTQPPSKVLHLRNLPWECTEEELVELGKPFGKVVNTKCNVGPNRNQAFI 60

Query: 375  EFADLNQAIAMIXXXXXXXDPAQLRGKTVYLQYSNRQEIVHNKTSGDVTGNVLLVTIEGV 554
            EF+DLNQAIAMI       +PAQ+RGKTVYLQYSNRQEIV+NKT+ DV GNVLLVTIEG 
Sbjct: 61   EFSDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVGGNVLLVTIEGA 120

Query: 555  EAQNVSIDVLHLVFSAFGYVQKIATFEKTAGFQALVQFSDQESASTAKNTLDSRSIPSYL 734
            +A+ VSIDVLHLVFSAFG+V KI TFEKTAGFQALVQFSD E+AS+AKN LD R+IPSYL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYL 180

Query: 735  LPEHVSTCTLKITFSGHTDLNVKFQSHRSRDYTNPLLPVAPSAIDGSGQFAVGLDGK--E 908
            LPEH+  CTL+IT+S HTDL+VKFQSHRSRDYTN  LPVAPSAID +G F+VGLDGK  E
Sbjct: 181  LPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLE 240

Query: 909  QESNVLLASIENMQYLVNVDTLYTVFSTFGPVQKIAMFEKNAGTHALVQYPDAQTAYVAK 1088
             ESNVLLASIENMQY V +D L+ VFS+FGPVQKIAMF+KN G  AL+QYPD QTA VAK
Sbjct: 241  PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 300

Query: 1089 EALEGHSIYDGGFCKLRLSYSRHTDLSVKVNNDRSRDYTTPNLYMLNSQPSLLGQQPSYP 1268
            EALEGH IYDGGFCKL LSYSRH+DLS+KVNNDRSRDYT PN  M+N QPS+LGQQP   
Sbjct: 301  EALEGHCIYDGGFCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQP--- 357

Query: 1269 MPGHTAPLYSGPQYAPPAANEVNGGPRPIAGWGMNTTAMPQPMAHQFPNAAYMPPPGTMH 1448
                    +  P +  P A      P+P AGW      +P  M  Q  N  Y+ PPGTM 
Sbjct: 358  -----VATHGPPAHTYPGAQHHQMMPQPSAGWATGGPPVPHSMPAQMNNNPYL-PPGTMP 411

Query: 1449 YDMGPSVVQMPGQNGQPPVMATPPY--GH 1529
              MG  ++QMP   G P   A PPY  GH
Sbjct: 412  PQMGHGMMQMPNHGGLPHAPAMPPYRPGH 440


>ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|222869023|gb|EEF06154.1|
            predicted protein [Populus trichocarpa]
          Length = 447

 Score =  605 bits (1560), Expect = e-170
 Identities = 309/447 (69%), Positives = 351/447 (78%), Gaps = 4/447 (0%)
 Frame = +3

Query: 195  MTSTSSQPQFRYTQPPSKVLHLRNCPWECTDEELIELGKPFGKVVNTKCNVGANRNQAFI 374
            M+S SSQ QFR TQPPSKVLHLRN PWECT+EEL+ELGKPFG VVNTKCNVG NRNQAFI
Sbjct: 1    MSSVSSQSQFRLTQPPSKVLHLRNLPWECTEEELVELGKPFGNVVNTKCNVGPNRNQAFI 60

Query: 375  EFADLNQAIAMIXXXXXXXDPAQLRGKTVYLQYSNRQEIVHNKTSGDVTGNVLLVTIEGV 554
            EFADLNQAIAMI       +PAQ+RGKTVYLQYSNRQEIV+NKT+ D  GNVLL+TIEG 
Sbjct: 61   EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADAGGNVLLITIEGA 120

Query: 555  EAQNVSIDVLHLVFSAFGYVQKIATFEKTAGFQALVQFSDQESASTAKNTLDSRSIPSYL 734
            +A+ VSIDVLHLVFSAFG+V KI TFEK   FQALVQFSD E+AS+AKN LD R+IPSYL
Sbjct: 121  DARLVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNALDGRNIPSYL 180

Query: 735  LPEHVSTCTLKITFSGHTDLNVKFQSHRSRDYTNPLLPVAPSAIDGSGQFAVGLDGK--E 908
            LPEH+  CTL+I +SGHTDL+VKFQSHRSRDYTNP LPVA SAID +G F++GLDGK  E
Sbjct: 181  LPEHLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLE 240

Query: 909  QESNVLLASIENMQYLVNVDTLYTVFSTFGPVQKIAMFEKNAGTHALVQYPDAQTAYVAK 1088
             ESNVLLASIENMQY V +D L+ VFS+FGPVQKIAMF+KN+G  AL+QYPD QTA VAK
Sbjct: 241  PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAK 300

Query: 1089 EALEGHSIYDGGFCKLRLSYSRHTDLSVKVNNDRSRDYTTPNLYMLNSQPSLLGQQP--S 1262
            EALEGH IYDGGFCKL LSYSRH DLS+KVNNDRSRDYT PN  M+N QPS+LGQQP  +
Sbjct: 301  EALEGHCIYDGGFCKLHLSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVAT 360

Query: 1263 YPMPGHTAPLYSGPQYAPPAANEVNGGPRPIAGWGMNTTAMPQPMAHQFPNAAYMPPPGT 1442
            +  P H   LY+G Q+AP   + +   P+P +GW      +P  M  Q  N  Y+ PPGT
Sbjct: 361  HGPPSH---LYTGAQFAPTTEHSMI--PQPSSGWATGFPPVPNSMPGQMNNNPYL-PPGT 414

Query: 1443 MHYDMGPSVVQMPGQNGQPPVMATPPY 1523
            M   MG  ++QMP   G P   A PPY
Sbjct: 415  MPPQMGHGMMQMPSHGGPPHTHAMPPY 441