BLASTX nr result

ID: Cimicifuga21_contig00002077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002077
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276622.1| PREDICTED: calvin cycle protein CP12-like is...   178   4e-42
ref|XP_002510743.1| conserved hypothetical protein [Ricinus comm...   154   4e-35
emb|CBI40783.3| unnamed protein product [Vitis vinifera]              152   2e-34
ref|XP_002301892.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_002887645.1| hypothetical protein ARALYDRAFT_895539 [Arab...   129   1e-27

>ref|XP_002276622.1| PREDICTED: calvin cycle protein CP12-like isoform 1 [Vitis
           vinifera] gi|359491885|ref|XP_003634338.1| PREDICTED:
           calvin cycle protein CP12-like isoform 2 [Vitis
           vinifera]
          Length = 134

 Score =  178 bits (451), Expect = 4e-42
 Identities = 91/135 (67%), Positives = 105/135 (77%)
 Frame = -1

Query: 942 SLMASFATSNLLPSAKLGSSFSLRSDGFPQISSISLPIRSSKKAKLTVKAMGTVKFKGTL 763
           S +A  A S+    + L SSFS+RS     +  +S P+RS KK  L VKAMG VKFKGT 
Sbjct: 3   SFVALCAPSHGSQGSILSSSFSIRSGA---LCDVSRPLRSPKKVNLCVKAMGVVKFKGTQ 59

Query: 762 MREKQLAEMIEKKILEATEVCEGDQTSDGCKVAWDEVEEVSQAKADLRRKLEKEDPLEYF 583
           MREKQL E+IEKK+LEA +VCEGD+TSD CKVAWDEVEEVSQAKADLRRK+EKEDPLE +
Sbjct: 60  MREKQLTELIEKKVLEAKQVCEGDETSDECKVAWDEVEEVSQAKADLRRKMEKEDPLESY 119

Query: 582 CTENPETDECRIYED 538
           C ENPE +ECRIYED
Sbjct: 120 CQENPENEECRIYED 134


>ref|XP_002510743.1| conserved hypothetical protein [Ricinus communis]
           gi|223551444|gb|EEF52930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score =  154 bits (390), Expect = 4e-35
 Identities = 87/137 (63%), Positives = 95/137 (69%), Gaps = 3/137 (2%)
 Frame = -1

Query: 942 SLMASFATSNLLPSAKLGSSFSLRSDGFPQISSISLPIRSSKKA--KLTVKAMGTV-KFK 772
           SL+A  +      S    SSF  RS      SSI L  R+  K    L V+AMG   KFK
Sbjct: 5   SLVAVLSAPARGTSILSSSSFLPRSCNIFTNSSICLKRRTENKGGMNLRVEAMGGAPKFK 64

Query: 771 GTLMREKQLAEMIEKKILEATEVCEGDQTSDGCKVAWDEVEEVSQAKADLRRKLEKEDPL 592
           GT MREK L EMIEKK++EA EVCEGDQTSD CKVAWDEVEEVSQAKAD R KLEK DPL
Sbjct: 65  GTQMREKHLTEMIEKKVMEAKEVCEGDQTSDECKVAWDEVEEVSQAKADFRLKLEKRDPL 124

Query: 591 EYFCTENPETDECRIYE 541
           EYFC +NPETDECR+YE
Sbjct: 125 EYFCQDNPETDECRVYE 141


>emb|CBI40783.3| unnamed protein product [Vitis vinifera]
          Length = 94

 Score =  152 bits (385), Expect = 2e-34
 Identities = 72/93 (77%), Positives = 81/93 (87%)
 Frame = -1

Query: 816 KAKLTVKAMGTVKFKGTLMREKQLAEMIEKKILEATEVCEGDQTSDGCKVAWDEVEEVSQ 637
           K+ L +  MG VKFKGT MREKQL E+IEKK+LEA +VCEGD+TSD CKVAWDEVEEVSQ
Sbjct: 2   KSGLRLLPMGVVKFKGTQMREKQLTELIEKKVLEAKQVCEGDETSDECKVAWDEVEEVSQ 61

Query: 636 AKADLRRKLEKEDPLEYFCTENPETDECRIYED 538
           AKADLRRK+EKEDPLE +C ENPE +ECRIYED
Sbjct: 62  AKADLRRKMEKEDPLESYCQENPENEECRIYED 94


>ref|XP_002301892.1| predicted protein [Populus trichocarpa] gi|222843618|gb|EEE81165.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  152 bits (384), Expect = 2e-34
 Identities = 69/84 (82%), Positives = 77/84 (91%)
 Frame = -1

Query: 789 GTVKFKGTLMREKQLAEMIEKKILEATEVCEGDQTSDGCKVAWDEVEEVSQAKADLRRKL 610
           G  KFKGT MREKQLAEMIEKK++EA EVCEGD+TSD CKVAWDEVEEVSQAKAD RR+L
Sbjct: 65  GVAKFKGTQMREKQLAEMIEKKVVEAKEVCEGDETSDECKVAWDEVEEVSQAKADFRRRL 124

Query: 609 EKEDPLEYFCTENPETDECRIYED 538
           EK+DPLEY+C +NPETDECR+YED
Sbjct: 125 EKQDPLEYYCQDNPETDECRVYED 148


>ref|XP_002887645.1| hypothetical protein ARALYDRAFT_895539 [Arabidopsis lyrata subsp.
           lyrata] gi|297333486|gb|EFH63904.1| hypothetical protein
           ARALYDRAFT_895539 [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score =  129 bits (325), Expect = 1e-27
 Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
 Frame = -1

Query: 819 KKAKLTVKAMGTVKFKGTLMREKQLAEMIEKKILEATEVCEGDQTSDGCKVAWDEVEEVS 640
           K+ +L +    T K+KGT MRE++L+EMIE+K+ EATEVCE ++ S+ C+VAWDEVEEVS
Sbjct: 40  KRFRLMMVTTATAKYKGTKMREEKLSEMIEEKVKEATEVCEAEERSEECRVAWDEVEEVS 99

Query: 639 QAKADLRRKLE--KEDPLEYFCTENPETDECRIYED 538
           QA+ADLR KL+   +DPLE FC ENPETDECRIYED
Sbjct: 100 QARADLRVKLKLLNQDPLESFCQENPETDECRIYED 135


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