BLASTX nr result

ID: Cimicifuga21_contig00002062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002062
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36763.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_002512371.1| Protein YIPF1, putative [Ricinus communis] g...   437   e-120
ref|XP_002319021.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|NP_198101.2| Yip1 integral membrane domain-containing protei...   433   e-119
gb|AFK48180.1| unknown [Lotus japonicus]                              432   e-119

>emb|CBI36763.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  441 bits (1135), Expect = e-121
 Identities = 217/283 (76%), Positives = 238/283 (84%), Gaps = 1/283 (0%)
 Frame = +2

Query: 92  MMSSG-YTSLDNQKVSGSVPAVSDPSHTTVKFAESSLQTFPPSETQGKISGGYRPPRDAD 268
           MMS G YT++DNQK+SGSVPAVSDP   TVKFA+S+L+TFPPSE QGKISG  RPPRDAD
Sbjct: 1   MMSGGNYTTIDNQKISGSVPAVSDPGQVTVKFADSNLETFPPSEAQGKISGASRPPRDAD 60

Query: 269 DSFSKPVAXXXXXXXXXXXXWLKIFTVAAYKPYFDVDTSDVLERIKDSLIPFRGSFSEKT 448
           ++FSKPV             WL+ FTVAAYKPYFDVDTSDVLERIKDSL PF GSFSEK 
Sbjct: 61  ETFSKPVPGSDESPPSG---WLRSFTVAAYKPYFDVDTSDVLERIKDSLFPFNGSFSEKV 117

Query: 449 ASNPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQKKEWDYDINMITWSAGLFYGYVTVV 628
           ASNPDLYGPFWICTTLIFVAA+IGTFVTYVAHK+QKKEWDYDIN++TWSAGLFYGYVT++
Sbjct: 118 ASNPDLYGPFWICTTLIFVAASIGTFVTYVAHKIQKKEWDYDINLVTWSAGLFYGYVTII 177

Query: 629 PLCLYVILKYFSAPSGLVQLLCLYGYSLFVFIPASCLSVVPVEVFRWVVAGVAGFMSASF 808
           PL LY+ILKYFSAPSGL QLLCLYGYSLF+FIPA CLSVVP+E+FRWVVAGVAGF+SA+F
Sbjct: 178 PLGLYIILKYFSAPSGLAQLLCLYGYSLFIFIPALCLSVVPLELFRWVVAGVAGFLSATF 237

Query: 809 VALNLRAHIMSAGERWFLIVVGIFXXXXXXXXXXXXXXFTVTV 937
           VALNLRAHI SAGERWFLIV  IF              FTVTV
Sbjct: 238 VALNLRAHIKSAGERWFLIVAAIFLLQLALAAVLKIYLFTVTV 280


>ref|XP_002512371.1| Protein YIPF1, putative [Ricinus communis]
           gi|223548332|gb|EEF49823.1| Protein YIPF1, putative
           [Ricinus communis]
          Length = 279

 Score =  437 bits (1125), Expect = e-120
 Identities = 210/282 (74%), Positives = 234/282 (82%)
 Frame = +2

Query: 92  MMSSGYTSLDNQKVSGSVPAVSDPSHTTVKFAESSLQTFPPSETQGKISGGYRPPRDADD 271
           MMS  YTSLDNQKVSGSVPAV DP H +VKF++S+LQTFPPS  QGKISGG  PPRDADD
Sbjct: 1   MMSGNYTSLDNQKVSGSVPAVPDPGHVSVKFSDSTLQTFPPSTAQGKISGGSHPPRDADD 60

Query: 272 SFSKPVAXXXXXXXXXXXXWLKIFTVAAYKPYFDVDTSDVLERIKDSLIPFRGSFSEKTA 451
           +FSKPV+            W + FT+AAYKPYFD+DT+DVLERIKDSL PFRG+F+EKTA
Sbjct: 61  TFSKPVSGSDEPQQGG---WFRTFTIAAYKPYFDIDTTDVLERIKDSLFPFRGTFTEKTA 117

Query: 452 SNPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQKKEWDYDINMITWSAGLFYGYVTVVP 631
            NPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQ K+W+YDIN++TWSAG+FYGYVT++P
Sbjct: 118 GNPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQNKKWEYDINLVTWSAGVFYGYVTIIP 177

Query: 632 LCLYVILKYFSAPSGLVQLLCLYGYSLFVFIPASCLSVVPVEVFRWVVAGVAGFMSASFV 811
           L LYVILKYFSAPSGL QL CLYGYSLFVFIPA CLS+VP+E+FRWV+AGVAGFMSA+FV
Sbjct: 178 LGLYVILKYFSAPSGLAQLFCLYGYSLFVFIPALCLSIVPLEIFRWVIAGVAGFMSATFV 237

Query: 812 ALNLRAHIMSAGERWFLIVVGIFXXXXXXXXXXXXXXFTVTV 937
           ALNLR HI SAGERWFLIV  IF              FTVTV
Sbjct: 238 ALNLRTHIKSAGERWFLIVASIFLLQLALAVVLKLYLFTVTV 279


>ref|XP_002319021.1| predicted protein [Populus trichocarpa] gi|222857397|gb|EEE94944.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  434 bits (1116), Expect = e-119
 Identities = 215/286 (75%), Positives = 238/286 (83%), Gaps = 4/286 (1%)
 Frame = +2

Query: 92  MMSSG---YTSLDNQKVSGSVPAVSDPSHTTVKF-AESSLQTFPPSETQGKISGGYRPPR 259
           MMS G   YT +DNQKVSGSVP+V DP H  V+F A+S+LQTFPPSE+QGKISGG RPPR
Sbjct: 1   MMSGGVGKYTHIDNQKVSGSVPSVPDPGHVAVQFTADSNLQTFPPSESQGKISGGTRPPR 60

Query: 260 DADDSFSKPVAXXXXXXXXXXXXWLKIFTVAAYKPYFDVDTSDVLERIKDSLIPFRGSFS 439
           DADD+FSKPV+            W + FTVAAYKPYFDVDT+DVLERIK SL PFRG+F+
Sbjct: 61  DADDTFSKPVSGSEESQQGG---WFRTFTVAAYKPYFDVDTTDVLERIKYSLFPFRGTFT 117

Query: 440 EKTASNPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQKKEWDYDINMITWSAGLFYGYV 619
           EKT SNPDLYGPFWICTTLIFVAA+IGTFVTY+AHKLQKKEW+YDIN++TWSAG+FYGYV
Sbjct: 118 EKTVSNPDLYGPFWICTTLIFVAASIGTFVTYIAHKLQKKEWNYDINLVTWSAGVFYGYV 177

Query: 620 TVVPLCLYVILKYFSAPSGLVQLLCLYGYSLFVFIPASCLSVVPVEVFRWVVAGVAGFMS 799
            +VPL LYVILKYFSAPSGLVQL CLYGYSLFVFIPA CLSV+PVE+FRWV+AGVAGFMS
Sbjct: 178 LLVPLVLYVILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVIPVEIFRWVIAGVAGFMS 237

Query: 800 ASFVALNLRAHIMSAGERWFLIVVGIFXXXXXXXXXXXXXXFTVTV 937
           A+FVALNLRAHIMSAGERWF IV GIF              FTVTV
Sbjct: 238 ATFVALNLRAHIMSAGERWFFIVAGIFLLQLALSVVLKLYLFTVTV 283


>ref|NP_198101.2| Yip1 integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|332006310|gb|AED93693.1| Yip1 integral
           membrane domain-containing protein [Arabidopsis
           thaliana]
          Length = 282

 Score =  433 bits (1113), Expect = e-119
 Identities = 210/283 (74%), Positives = 239/283 (84%), Gaps = 1/283 (0%)
 Frame = +2

Query: 92  MMSSG-YTSLDNQKVSGSVPAVSDPSHTTVKFAESSLQTFPPSETQGKISGGYRPPRDAD 268
           MMS G YT++D+QKVSGSVPAV DP H TVKFA+S+LQTFPPS TQGKISGG  PPRDAD
Sbjct: 2   MMSGGSYTNIDHQKVSGSVPAVPDPGHVTVKFADSNLQTFPPSATQGKISGGTNPPRDAD 61

Query: 269 DSFSKPVAXXXXXXXXXXXXWLKIFTVAAYKPYFDVDTSDVLERIKDSLIPFRGSFSEKT 448
           D+FS+PV             WL  FTV AYKPYFDVDTSDV+ER+K+SL PFRG+F+EKT
Sbjct: 62  DTFSRPV--NGTTDEPQSSGWLHRFTVGAYKPYFDVDTSDVVERLKESLFPFRGTFTEKT 119

Query: 449 ASNPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQKKEWDYDINMITWSAGLFYGYVTVV 628
           A+NPDLYGPFWICTTLIFVAA+IGTFVTY+AHKL+K+EW+YDIN++TWSAG+FYGYVT+V
Sbjct: 120 ANNPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKKQEWNYDINLVTWSAGVFYGYVTIV 179

Query: 629 PLCLYVILKYFSAPSGLVQLLCLYGYSLFVFIPASCLSVVPVEVFRWVVAGVAGFMSASF 808
           PL LYV+LKYFSAPSGLVQL CLYGYSLFVFIPA CLSVVP+E+FRWV+AG+AGFMSA+F
Sbjct: 180 PLALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGLAGFMSATF 239

Query: 809 VALNLRAHIMSAGERWFLIVVGIFXXXXXXXXXXXXXXFTVTV 937
           VALNL+AHI SAGERWFLIVV IF              FTVTV
Sbjct: 240 VALNLKAHINSAGERWFLIVVSIFLLQLALSVVLKLYLFTVTV 282


>gb|AFK48180.1| unknown [Lotus japonicus]
          Length = 280

 Score =  432 bits (1112), Expect = e-119
 Identities = 209/282 (74%), Positives = 235/282 (83%)
 Frame = +2

Query: 92  MMSSGYTSLDNQKVSGSVPAVSDPSHTTVKFAESSLQTFPPSETQGKISGGYRPPRDADD 271
           MMS  YTS+DNQ++ GSVPAV DP   TVKF +S+L+TFPPSETQGKI+GG RPPRDADD
Sbjct: 1   MMSGKYTSIDNQQLQGSVPAVPDPPPVTVKFTDSNLKTFPPSETQGKITGGSRPPRDADD 60

Query: 272 SFSKPVAXXXXXXXXXXXXWLKIFTVAAYKPYFDVDTSDVLERIKDSLIPFRGSFSEKTA 451
           SFSKPV+            WL  FTVAAYKPYFD+D+SDVLERIKDSL PFRG+F+EKTA
Sbjct: 61  SFSKPVSGSDEPQQQGG--WLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTA 118

Query: 452 SNPDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQKKEWDYDINMITWSAGLFYGYVTVVP 631
           +NPDLYGPFWICTTLIFVAA+IGTFVTY+AHKL+ KEW+YDIN++TWSAGLFYGYVTV P
Sbjct: 119 TNPDLYGPFWICTTLIFVAASIGTFVTYLAHKLKDKEWNYDINLVTWSAGLFYGYVTVAP 178

Query: 632 LCLYVILKYFSAPSGLVQLLCLYGYSLFVFIPASCLSVVPVEVFRWVVAGVAGFMSASFV 811
           LCLYVILKYFSAP+ LVQL CLYGYSLFVFIPA C+SVVP+E+FRWV+AGVAG MSA+FV
Sbjct: 179 LCLYVILKYFSAPASLVQLFCLYGYSLFVFIPAMCMSVVPLEIFRWVIAGVAGLMSATFV 238

Query: 812 ALNLRAHIMSAGERWFLIVVGIFXXXXXXXXXXXXXXFTVTV 937
            LNLRAHIMSAGERWFLIV  IF              FTV+V
Sbjct: 239 GLNLRAHIMSAGERWFLIVAAIFLLQLALAVVLKMYLFTVSV 280


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