BLASTX nr result

ID: Cimicifuga21_contig00002061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002061
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic...   230   5e-58
ref|XP_002520230.1| thioredoxin m(mitochondrial)-type, putative ...   228   2e-57
ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-lik...   228   3e-57
gb|ABK96292.1| unknown [Populus trichocarpa x Populus deltoides]      225   1e-56
gb|ABS84825.1| thioredoxin [Limonium bicolor]                         224   3e-56

>ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic-like [Vitis vinifera]
          Length = 189

 Score =  230 bits (586), Expect = 5e-58
 Identities = 119/190 (62%), Positives = 142/190 (74%), Gaps = 3/190 (1%)
 Frame = +3

Query: 201 MAAVLESLLVPRCSNSRSRST---HASPSMSSSVSTRQARSLPEFKGLRIQLQSSRHTFA 371
           MA  L S+++P  S+S  R+       PS +     R + SLPEF GL+I   SS    A
Sbjct: 1   MATALHSVVLPCSSSSDPRAALLPGVMPSPTVVSVGRSSFSLPEFSGLKIHTNSSS-ALA 59

Query: 372 SLSSRNARIVRRGGGVVCEAQDTALDVDSVTDKTWESLVLKADLPVLVEFWAPWCGPCRM 551
           SL+SR +R+ RRGG +VCEAQ+TALDV  VTD TW+SLVLKA  PVLVEFWAPWCGPCR+
Sbjct: 60  SLNSRTSRVCRRGGRIVCEAQETALDVPIVTDTTWQSLVLKATGPVLVEFWAPWCGPCRI 119

Query: 552 IHPVIGELSKEYEGKLNCYKLNTDDCPTTATQYGIRSIPTVMIFKDGEKKDAVIGAVPKT 731
           IHPV+ ELS+EY GKL  +KLNTDD P+ ATQYGIRS+PT MIF +GEKKDAV+GAVPKT
Sbjct: 120 IHPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVPTTMIFINGEKKDAVLGAVPKT 179

Query: 732 TLTTCIEKFV 761
           TLT  IEKF+
Sbjct: 180 TLTASIEKFL 189


>ref|XP_002520230.1| thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
           gi|223540576|gb|EEF42142.1| thioredoxin
           m(mitochondrial)-type, putative [Ricinus communis]
          Length = 181

 Score =  228 bits (581), Expect = 2e-57
 Identities = 116/187 (62%), Positives = 145/187 (77%)
 Frame = +3

Query: 201 MAAVLESLLVPRCSNSRSRSTHASPSMSSSVSTRQARSLPEFKGLRIQLQSSRHTFASLS 380
           MA VLESL +PR S++   ++    S+SSSV+ R A +LP  KGL++   ++  + A   
Sbjct: 1   MATVLESLSIPRASSALPPNS----SLSSSVNRRPAVTLPVAKGLKVSSVTTARSLARSP 56

Query: 381 SRNARIVRRGGGVVCEAQDTALDVDSVTDKTWESLVLKADLPVLVEFWAPWCGPCRMIHP 560
            R+   + R G +VCEAQDTA++V +VTD+TW+SLVL+++ PVLVEFWAPWCGPCRMIHP
Sbjct: 57  PRSQ--LARPGRIVCEAQDTAVEVLAVTDQTWKSLVLESEFPVLVEFWAPWCGPCRMIHP 114

Query: 561 VIGELSKEYEGKLNCYKLNTDDCPTTATQYGIRSIPTVMIFKDGEKKDAVIGAVPKTTLT 740
           VI  L+ EY GKL CYKLNTD+ P+ ATQYGIRSIPTVMIFKDGEKKDA+IGAVPKTTLT
Sbjct: 115 VIDALAGEYVGKLKCYKLNTDESPSVATQYGIRSIPTVMIFKDGEKKDAIIGAVPKTTLT 174

Query: 741 TCIEKFV 761
             IEKF+
Sbjct: 175 ASIEKFL 181


>ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-like [Vitis vinifera]
           gi|302143024|emb|CBI20319.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score =  228 bits (580), Expect = 3e-57
 Identities = 118/191 (61%), Positives = 146/191 (76%), Gaps = 4/191 (2%)
 Frame = +3

Query: 201 MAAVLESLLVPRCSNSRSRSTHASPSMSSSVSTRQARS----LPEFKGLRIQLQSSRHTF 368
           MA VL+SL VPR  +S   S+  +P  SS V     R     LPEF GL+IQ   +  + 
Sbjct: 1   MATVLDSLAVPR--SSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSV 58

Query: 369 ASLSSRNARIVRRGGGVVCEAQDTALDVDSVTDKTWESLVLKADLPVLVEFWAPWCGPCR 548
           A+ + R++R+ RR GGVVCEAQ+TA++V +V D TW+SLVL AD PVLVEFWAPWCGPCR
Sbjct: 59  AA-AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCR 117

Query: 549 MIHPVIGELSKEYEGKLNCYKLNTDDCPTTATQYGIRSIPTVMIFKDGEKKDAVIGAVPK 728
           MIHPVI EL+K+Y GKL CYK+NTD+ P+ AT+YGIRSIPTV+IFK GEKK+A+IGAVPK
Sbjct: 118 MIHPVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPK 177

Query: 729 TTLTTCIEKFV 761
           +TLTT IEKF+
Sbjct: 178 STLTTSIEKFL 188


>gb|ABK96292.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 190

 Score =  225 bits (574), Expect = 1e-56
 Identities = 114/193 (59%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
 Frame = +3

Query: 201 MAAVLESLLVPRCSNSRSRSTHASP-SMSSSVSTRQARSLPEFKGLRIQLQSSR-----H 362
           MAA+LESL VP  +  + + T  +P S  +S   R++  LP  KGL++   SS       
Sbjct: 1   MAALLESLTVPPLTFPKPKPTTTTPLSAFASPIHRRSLRLPHVKGLKLSFNSSTINRSPG 60

Query: 363 TFASLSSRNARIVRRGGGVVCEAQDTALDVDSVTDKTWESLVLKADLPVLVEFWAPWCGP 542
           +F +L+S     + RGG +VCEAQ+TA++V SVTD TW+S+VL+++ PVLVEFWAPWCGP
Sbjct: 61  SFVTLTSSR---LSRGGRIVCEAQETAVEVASVTDATWKSVVLESESPVLVEFWAPWCGP 117

Query: 543 CRMIHPVIGELSKEYEGKLNCYKLNTDDCPTTATQYGIRSIPTVMIFKDGEKKDAVIGAV 722
           CRMIHP+I EL+ +Y GKL CYK+NTDDCP+ ATQYGIRSIPTV+IFK+GEKK+A+IGAV
Sbjct: 118 CRMIHPIIDELATQYTGKLKCYKVNTDDCPSIATQYGIRSIPTVIIFKNGEKKEAIIGAV 177

Query: 723 PKTTLTTCIEKFV 761
           PKTTLTT IEKF+
Sbjct: 178 PKTTLTTTIEKFL 190


>gb|ABS84825.1| thioredoxin [Limonium bicolor]
          Length = 187

 Score =  224 bits (571), Expect = 3e-56
 Identities = 117/190 (61%), Positives = 141/190 (74%), Gaps = 3/190 (1%)
 Frame = +3

Query: 201 MAAVLESLLVPRCSNSRSRSTHASPSMSSSVS---TRQARSLPEFKGLRIQLQSSRHTFA 371
           MAAV ES+ VPR S   S +     S+SS VS    RQ   L +F GLR+   +S     
Sbjct: 1   MAAVFESVSVPRSSIVTSAALAPIVSLSSVVSFSCARQPVKLAKFSGLRVISSASTRRLR 60

Query: 372 SLSSRNARIVRRGGGVVCEAQDTALDVDSVTDKTWESLVLKADLPVLVEFWAPWCGPCRM 551
            L S     VRR G VVCE+ DTA++V SVTD +W+SLVL++D PVLVEFWAPWCGPCRM
Sbjct: 61  PLRSSG---VRRSGRVVCESPDTAVEVQSVTDSSWQSLVLESDSPVLVEFWAPWCGPCRM 117

Query: 552 IHPVIGELSKEYEGKLNCYKLNTDDCPTTATQYGIRSIPTVMIFKDGEKKDAVIGAVPKT 731
           IHP+I EL+K+Y GKL C+K+NTD+ P+ AT+YGIRSIPTVMIFK+GEKKDAVIGAVPK+
Sbjct: 118 IHPIIDELAKQYTGKLKCFKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDAVIGAVPKS 177

Query: 732 TLTTCIEKFV 761
           TLTT IEKF+
Sbjct: 178 TLTTSIEKFL 187


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