BLASTX nr result

ID: Cimicifuga21_contig00002053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002053
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307781.1| predicted protein [Populus trichocarpa] gi|2...   302   e-156
emb|CBI18871.3| unnamed protein product [Vitis vinifera]              295   e-155
ref|XP_002285928.2| PREDICTED: WD repeat-containing protein DWA2...   295   e-155
ref|XP_002890391.1| transducin family protein [Arabidopsis lyrat...   299   e-154
ref|NP_173478.2| transducin/WD-40 repeat-containing protein [Ara...   299   e-154

>ref|XP_002307781.1| predicted protein [Populus trichocarpa] gi|222857230|gb|EEE94777.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  302 bits (773), Expect(2) = e-156
 Identities = 141/193 (73%), Positives = 164/193 (84%), Gaps = 4/193 (2%)
 Frame = +1

Query: 607  KVQSTETVGSLHYFSGGAWDPHDRNAVAATCDSSIQFWDLRTMKKTNSIEQAHVRSVDYN 786
            +VQS E+ G LHY SGGAWDPHD NAVAATC+SS+QFWDLRTMKKT+SIE  HVR+VDY+
Sbjct: 158  QVQSKESAGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRTMKKTSSIECGHVRNVDYD 217

Query: 787  NKRQNILVTAEEEAGIHIWDLRMPNVPVRDLPGHAHWAWAVQYNPEFDELILSAGTDSAV 966
             ++ +ILVTAE+E+GIHIWDLRMP VP+ +L GH+HW WAV  NPE+D LILS GTDS V
Sbjct: 218  TRKMHILVTAEDESGIHIWDLRMPKVPINELRGHSHWTWAVTCNPEYDGLILSGGTDSTV 277

Query: 967  NLWFASAVNSDDTSS----ESPTRQVDPLLNSYNDYEDSVYGLAWSSRQPWIFASLSYDG 1134
            NLWFAS   SD+ +S     SPT+++DPLL S+NDYEDSVYGLAWSSR+PWIFASLSYDG
Sbjct: 278  NLWFASTTTSDELTSGSVVASPTQKLDPLLYSFNDYEDSVYGLAWSSREPWIFASLSYDG 337

Query: 1135 RVVVESVKPYLRR 1173
            RVVVESVKPYL R
Sbjct: 338  RVVVESVKPYLPR 350



 Score =  276 bits (706), Expect(2) = e-156
 Identities = 128/162 (79%), Positives = 145/162 (89%)
 Frame = +2

Query: 53  MQGAQTGIGYGLKYQARCIADVKAETDQTTFITGTLSLKEENEVHLIRLSSSETELVCEG 232
           MQG  +GIGYGLKYQARCI+DVKA+TD T+FITGTLSL+EENEVHL+RLSS  TEL+CEG
Sbjct: 1   MQGGSSGIGYGLKYQARCISDVKADTDHTSFITGTLSLREENEVHLLRLSSGGTELICEG 60

Query: 233 LFSHPNEIWDLSSCPFDARIFSTVFSTSESYGAAVWKIPELYGQSNSPQLEQLASLDAHT 412
           LFSHPNEIWDLSSCPFD RIFSTVFST ES+GAAVW+IPELYGQ NSPQLE++ASLD H 
Sbjct: 61  LFSHPNEIWDLSSCPFDQRIFSTVFSTGESFGAAVWQIPELYGQLNSPQLERIASLDGHV 120

Query: 413 CKIKCTLWWPSGQNDKLISIDEQNIFLWSLDSSNKTAKVWSQ 538
            K+ C LWWPSG+NDKLISIDE+N+FLWSLD S K A+V S+
Sbjct: 121 GKVNCILWWPSGRNDKLISIDEENLFLWSLDCSRKAAQVQSK 162


>emb|CBI18871.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  295 bits (755), Expect(2) = e-155
 Identities = 142/193 (73%), Positives = 166/193 (86%), Gaps = 4/193 (2%)
 Frame = +1

Query: 607  KVQSTETVGSLHYFSGGAWDPHDRNAVAATCDSSIQFWDLRTMKKTNSIEQAHVRSVDYN 786
            +V S E+ G LHY SGGAWDPHD N+VA+TC+ SIQFWDLRTMKKTNSIE AHVR+VDY+
Sbjct: 158  QVISKESAGMLHYLSGGAWDPHDVNSVASTCEWSIQFWDLRTMKKTNSIEHAHVRNVDYD 217

Query: 787  NKRQNILVTAEEEAGIHIWDLRMPNVPVRDLPGHAHWAWAVQYNPEFDELILSAGTDSAV 966
             K+++ILVTAE+E+GI IWDLRMP VP+++LPGH HW W V+ NPE+  LILSAGTDS+V
Sbjct: 218  TKKKHILVTAEDESGICIWDLRMPKVPIKELPGHTHWTWTVKCNPEYG-LILSAGTDSSV 276

Query: 967  NLWFASAVNSDDTSS----ESPTRQVDPLLNSYNDYEDSVYGLAWSSRQPWIFASLSYDG 1134
            NLW AS  ++DD +S    ESPTRQVDPLLNSY+DYEDSVYGLAWSSR+P IFASLSYDG
Sbjct: 277  NLWLASMSSNDDLTSESPIESPTRQVDPLLNSYSDYEDSVYGLAWSSREPSIFASLSYDG 336

Query: 1135 RVVVESVKPYLRR 1173
            RVVVESVKPYL +
Sbjct: 337  RVVVESVKPYLSK 349



 Score =  281 bits (718), Expect(2) = e-155
 Identities = 129/162 (79%), Positives = 148/162 (91%)
 Frame = +2

Query: 53  MQGAQTGIGYGLKYQARCIADVKAETDQTTFITGTLSLKEENEVHLIRLSSSETELVCEG 232
           MQG  +GIGYGLKYQARCIADVKA+TD T+FITGTLSLKEENEVHLIRLSS  TEL+CEG
Sbjct: 1   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSGGTELICEG 60

Query: 233 LFSHPNEIWDLSSCPFDARIFSTVFSTSESYGAAVWKIPELYGQSNSPQLEQLASLDAHT 412
           LFSHPNEIWDL+SCP+D R+FSTVFS+ ESYGAAVW+IPELYGQ NSPQLE++A LDAH 
Sbjct: 61  LFSHPNEIWDLASCPYDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHA 120

Query: 413 CKIKCTLWWPSGQNDKLISIDEQNIFLWSLDSSNKTAKVWSQ 538
           CKIKC LWWPSG++DKL+SID++N+FLWSLDSS K A+V S+
Sbjct: 121 CKIKCILWWPSGRHDKLVSIDDENLFLWSLDSSRKAAQVISK 162


>ref|XP_002285928.2| PREDICTED: WD repeat-containing protein DWA2 [Vitis vinifera]
          Length = 351

 Score =  295 bits (754), Expect(2) = e-155
 Identities = 142/194 (73%), Positives = 166/194 (85%), Gaps = 5/194 (2%)
 Frame = +1

Query: 607  KVQSTETVGSLHYFSGGAWDPHDRNAVAATCDSSIQFWDLRTMKKTNSIEQAHVRSVDYN 786
            +V S E+ G LHY SGGAWDPHD N+VA+TC+ SIQFWDLRTMKKTNSIE AHVR+VDY+
Sbjct: 158  QVISKESAGMLHYLSGGAWDPHDVNSVASTCEWSIQFWDLRTMKKTNSIEHAHVRNVDYD 217

Query: 787  NKRQNILVTAEEEAGIHIWDLRMPNVPVRDLPGHAHWAWAVQYNPEFDELILSAGTDSAV 966
             K+++ILVTAE+E+GI IWDLRMP VP+++LPGH HW W V+ NPE+  LILSAGTDS+V
Sbjct: 218  TKKKHILVTAEDESGICIWDLRMPKVPIKELPGHTHWTWTVKCNPEYG-LILSAGTDSSV 276

Query: 967  NLWFASAVNSDDTSS-----ESPTRQVDPLLNSYNDYEDSVYGLAWSSRQPWIFASLSYD 1131
            NLW AS  ++DD +S     ESPTRQVDPLLNSY+DYEDSVYGLAWSSR+P IFASLSYD
Sbjct: 277  NLWLASMSSNDDLTSESSPIESPTRQVDPLLNSYSDYEDSVYGLAWSSREPSIFASLSYD 336

Query: 1132 GRVVVESVKPYLRR 1173
            GRVVVESVKPYL +
Sbjct: 337  GRVVVESVKPYLSK 350



 Score =  281 bits (718), Expect(2) = e-155
 Identities = 129/162 (79%), Positives = 148/162 (91%)
 Frame = +2

Query: 53  MQGAQTGIGYGLKYQARCIADVKAETDQTTFITGTLSLKEENEVHLIRLSSSETELVCEG 232
           MQG  +GIGYGLKYQARCIADVKA+TD T+FITGTLSLKEENEVHLIRLSS  TEL+CEG
Sbjct: 1   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSGGTELICEG 60

Query: 233 LFSHPNEIWDLSSCPFDARIFSTVFSTSESYGAAVWKIPELYGQSNSPQLEQLASLDAHT 412
           LFSHPNEIWDL+SCP+D R+FSTVFS+ ESYGAAVW+IPELYGQ NSPQLE++A LDAH 
Sbjct: 61  LFSHPNEIWDLASCPYDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHA 120

Query: 413 CKIKCTLWWPSGQNDKLISIDEQNIFLWSLDSSNKTAKVWSQ 538
           CKIKC LWWPSG++DKL+SID++N+FLWSLDSS K A+V S+
Sbjct: 121 CKIKCILWWPSGRHDKLVSIDDENLFLWSLDSSRKAAQVISK 162


>ref|XP_002890391.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297336233|gb|EFH66650.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 351

 Score =  299 bits (766), Expect(2) = e-154
 Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 4/193 (2%)
 Frame = +1

Query: 607  KVQSTETVGSLHYFSGGAWDPHDRNAVAATCDSSIQFWDLRTMKKTNSIEQAHVRSVDYN 786
            +V S ++ G LH  SGGAWDPHD NAVAAT +SS+QFWDLRTMKK  SIE AHVR VDYN
Sbjct: 158  EVLSKDSAGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVKSIEHAHVRGVDYN 217

Query: 787  NKRQNILVTAEEEAGIHIWDLRMPNVPVRDLPGHAHWAWAVQYNPEFDELILSAGTDSAV 966
             KR++ILVTAE+E+GIH+WDLR   VPV++LPGH HW WAV+ NPE+D LILSAGTDSAV
Sbjct: 218  PKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVKCNPEYDGLILSAGTDSAV 277

Query: 967  NLWFASAVNSDDTSSESP---TRQ-VDPLLNSYNDYEDSVYGLAWSSRQPWIFASLSYDG 1134
            NLWFASA +SDD +SESP   TRQ V+PLLNSY DYEDSVYGLAWSSR+PW+FASLSYDG
Sbjct: 278  NLWFASASSSDDKTSESPVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYDG 337

Query: 1135 RVVVESVKPYLRR 1173
            RVV+ESVKP+L R
Sbjct: 338  RVVIESVKPFLPR 350



 Score =  273 bits (698), Expect(2) = e-154
 Identities = 127/162 (78%), Positives = 146/162 (90%)
 Frame = +2

Query: 53  MQGAQTGIGYGLKYQARCIADVKAETDQTTFITGTLSLKEENEVHLIRLSSSETELVCEG 232
           MQG  +GIGYGLKYQARCI+DVKA+TD T+F+TGTLSLKEENEVHL+RLSS  +EL+CEG
Sbjct: 1   MQGGSSGIGYGLKYQARCISDVKADTDYTSFLTGTLSLKEENEVHLLRLSSGGSELICEG 60

Query: 233 LFSHPNEIWDLSSCPFDARIFSTVFSTSESYGAAVWKIPELYGQSNSPQLEQLASLDAHT 412
           LFSHPNEIWDL+SCPFD RIFSTVFST ES+GAA+W+IPELYGQ NSPQLE++ASLDAH 
Sbjct: 61  LFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAHV 120

Query: 413 CKIKCTLWWPSGQNDKLISIDEQNIFLWSLDSSNKTAKVWSQ 538
            KI C LWWPSG+ DKLISIDEQN+FLWSLD S K+A+V S+
Sbjct: 121 GKINCVLWWPSGRCDKLISIDEQNLFLWSLDCSKKSAEVLSK 162


>ref|NP_173478.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
            gi|20260516|gb|AAM13156.1| unknown protein [Arabidopsis
            thaliana] gi|23198164|gb|AAN15609.1| unknown protein
            [Arabidopsis thaliana] gi|332191863|gb|AEE29984.1|
            transducin/WD-40 repeat-containing protein [Arabidopsis
            thaliana]
          Length = 351

 Score =  299 bits (766), Expect(2) = e-154
 Identities = 142/193 (73%), Positives = 165/193 (85%), Gaps = 4/193 (2%)
 Frame = +1

Query: 607  KVQSTETVGSLHYFSGGAWDPHDRNAVAATCDSSIQFWDLRTMKKTNSIEQAHVRSVDYN 786
            +V S ++ G LH  SGGAWDPHD NAVAAT +SS+QFWDLRTMKK NSIE AHVR VDYN
Sbjct: 158  EVLSKDSAGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVNSIEHAHVRGVDYN 217

Query: 787  NKRQNILVTAEEEAGIHIWDLRMPNVPVRDLPGHAHWAWAVQYNPEFDELILSAGTDSAV 966
             KR++ILVTAE+E+GIH+WDLR   VPV++LPGH HW WAV+ NPE+D LILSAGTDS V
Sbjct: 218  PKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVV 277

Query: 967  NLWFASAVNSDDTSSESP---TRQ-VDPLLNSYNDYEDSVYGLAWSSRQPWIFASLSYDG 1134
            NLW+ASA +SDD +SESP   TRQ V+PLLNSY DYEDSVYGLAWSSR+PW+FASLSYDG
Sbjct: 278  NLWYASATSSDDKTSESPVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYDG 337

Query: 1135 RVVVESVKPYLRR 1173
            RV++ESVKP+L R
Sbjct: 338  RVIIESVKPFLPR 350



 Score =  273 bits (697), Expect(2) = e-154
 Identities = 127/162 (78%), Positives = 146/162 (90%)
 Frame = +2

Query: 53  MQGAQTGIGYGLKYQARCIADVKAETDQTTFITGTLSLKEENEVHLIRLSSSETELVCEG 232
           MQG  +GIGYGLKYQ+RCI+DVKA+TD T+F+TGTLSLKEENEVHL+RLSS  +EL+CEG
Sbjct: 1   MQGGSSGIGYGLKYQSRCISDVKADTDYTSFLTGTLSLKEENEVHLLRLSSGGSELICEG 60

Query: 233 LFSHPNEIWDLSSCPFDARIFSTVFSTSESYGAAVWKIPELYGQSNSPQLEQLASLDAHT 412
           LFSHPNEIWDL+SCPFD RIFSTVFST ES+GAA+W+IPELYGQ NSPQLE++ASLDAH 
Sbjct: 61  LFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAHV 120

Query: 413 CKIKCTLWWPSGQNDKLISIDEQNIFLWSLDSSNKTAKVWSQ 538
            KI C LWWPSG+ DKLISIDEQNIFLWSLD S K+A+V S+
Sbjct: 121 GKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSK 162


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