BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002045
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vit...   365   2e-98
emb|CBI39159.3| unnamed protein product [Vitis vinifera]              358   3e-96
ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|2...   317   7e-84
ref|XP_002527387.1| DNA binding protein, putative [Ricinus commu...   306   1e-80
ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like...   263   1e-67

>ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
          Length = 357

 Score =  365 bits (936), Expect = 2e-98
 Identities = 213/368 (57%), Positives = 251/368 (68%), Gaps = 13/368 (3%)
 Frame = +3

Query: 102  MYPSS-----HRPTGPPSLPRYGSAPGSFLASVVDSVIGGTDEEFPPVGSESLMT-RYFS 263
            MYPSS     HR      L RYGSAPGS L S VDS++  TD EF P+GS  +M  +YFS
Sbjct: 1    MYPSSASSSSHRSLHSSGLIRYGSAPGSLLTSAVDSLVS-TDREFSPLGSHHIMPHQYFS 59

Query: 264  GDXXXXXXXXXXXCK-AAPSTAEIYRTERAGNTG--LQRSYGLNQLAVGDLTTASNMRSS 434
            GD           CK AAP     ++   AG     LQRSYG +++ V   +TAS+++  
Sbjct: 60   GDSSSEST-----CKVAAPPD---HKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGG 111

Query: 435  XXXXXXXXXXPSLIRHSSSPAGFFNHLGVDN-GFTVSRGIGSYGSQAGTSG-HGIANGRL 608
                      PSLIRHSSSPAGF N L  DN GF+V+RG G+Y SQ G +G HGI+  RL
Sbjct: 112  GEGGGGGGSAPSLIRHSSSPAGFLNQLTADNCGFSVTRGTGNYSSQGGCNGGHGIS--RL 169

Query: 609  ASQLSFTRQDSLSQIXXXXXXXXXXXXXXXXXRNAGQAYG--SFPMGSWDDNNTIMFSSP 782
             SQLSF RQDSLSQI                 RNA  +Y   SFPM +WD+ NTI+FS+ 
Sbjct: 170  KSQLSFKRQDSLSQISEVSENMVDGISSDNGHRNATHSYATASFPMDAWDNTNTIVFSTT 229

Query: 783  SNKRAKTVNGDIAAALSGVDSQFSLPRTSLEMAAVEKLLQIQPDSVPCKIRAKRGFATHP 962
             NKRAK +NGDI  +LS ++ QFSLP+TSLEMAAVEKLLQ+  DSVPCK+RAKRG ATHP
Sbjct: 230  PNKRAKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHP 289

Query: 963  RSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQGEVKKLHKDLDHC 1142
            RSIAERERRTRIS KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EV+KL+K+L++C
Sbjct: 290  RSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENC 349

Query: 1143 TCGCKPAL 1166
            TCGCK AL
Sbjct: 350  TCGCKQAL 357


>emb|CBI39159.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  358 bits (918), Expect = 3e-96
 Identities = 210/367 (57%), Positives = 248/367 (67%), Gaps = 12/367 (3%)
 Frame = +3

Query: 102  MYPSS-----HRPTGPPSLPRYGSAPGSFLASVVDSVIGGTDEEFPPVGSESLMT-RYFS 263
            MYPSS     HR      L RYGSAPGS L S VDS++  TD EF P+GS  +M  +YFS
Sbjct: 58   MYPSSASSSSHRSLHSSGLIRYGSAPGSLLTSAVDSLVS-TDREFSPLGSHHIMPHQYFS 116

Query: 264  GDXXXXXXXXXXXCK-AAPSTAEIYRTERAGNTG--LQRSYGLNQLAVGDLTTASNMRSS 434
            GD           CK AAP     ++   AG     LQRSYG +++ V   +TAS+++  
Sbjct: 117  GDSSSEST-----CKVAAPPD---HKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGG 168

Query: 435  XXXXXXXXXXPSLIRHSSSPAGFFNHLGVDNGFTVSRGIGSYGSQAGTSG-HGIANGRLA 611
                      PSLIRHSSSPAGF N L  DN   ++RG G+Y SQ G +G HGI+  RL 
Sbjct: 169  GEGGGGGGSAPSLIRHSSSPAGFLNQLTADN---LTRGTGNYSSQGGCNGGHGIS--RLK 223

Query: 612  SQLSFTRQDSLSQIXXXXXXXXXXXXXXXXXRNAGQAYG--SFPMGSWDDNNTIMFSSPS 785
            SQLSF RQDSLSQI                 RNA  +Y   SFPM +WD+ NTI+FS+  
Sbjct: 224  SQLSFKRQDSLSQISEVSENMVDGISSDNGHRNATHSYATASFPMDAWDNTNTIVFSTTP 283

Query: 786  NKRAKTVNGDIAAALSGVDSQFSLPRTSLEMAAVEKLLQIQPDSVPCKIRAKRGFATHPR 965
            NKRAK +NGDI  +LS ++ QFSLP+TSLEMAAVEKLLQ+  DSVPCK+RAKRG ATHPR
Sbjct: 284  NKRAKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPR 343

Query: 966  SIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQGEVKKLHKDLDHCT 1145
            SIAERERRTRIS KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EV+KL+K+L++CT
Sbjct: 344  SIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCT 403

Query: 1146 CGCKPAL 1166
            CGCK AL
Sbjct: 404  CGCKQAL 410


>ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|222861885|gb|EEE99427.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  317 bits (811), Expect = 7e-84
 Identities = 190/362 (52%), Positives = 230/362 (63%), Gaps = 6/362 (1%)
 Frame = +3

Query: 90   QIPHMYPSSHRPTGPPS-LPRYGSAPGSFLASVVDSVIGGTDEEFPPVGSESLMTR--YF 260
            Q P    SS + +  PS L RYGSAPGSFL   VDSVIG  D E   +GS  L+ R  +F
Sbjct: 3    QQPSSSSSSPQKSNLPSGLTRYGSAPGSFLTRAVDSVIGA-DRELSGLGSTPLVGRQQHF 61

Query: 261  SGDXXXXXXXXXXXCKAAPSTAEIYRTERAGNTGLQRSYGLNQLAVGDLTTASNMRSSXX 440
            SGD           CK   S+ +    +  G  GLQRSYGLN++A G             
Sbjct: 62   SGDSPSITSEST--CKVNSSSCDRKAPKSGGGGGLQRSYGLNEIAHG------------- 106

Query: 441  XXXXXXXXPSLIRHSSSPAGFFNHLGVDNG-FTVSRGIGSYGSQAGTSGHGIANGRLASQ 617
                     SL+R  SSPAGF +HL  +NG F+++RG G Y S+ G+ G      RL SQ
Sbjct: 107  -------AGSLVRQRSSPAGFLSHLATENGGFSITRGTGGYNSRNGSGG---GPSRLKSQ 156

Query: 618  LSFTRQDSLSQIXXXXXXXXXXXXXXXXXRNAGQAYG--SFPMGSWDDNNTIMFSSPSNK 791
            LSFTRQDSLSQI                 +N+  +Y   SF M SWD  N+I+FS   +K
Sbjct: 157  LSFTRQDSLSQISEVSENVVEGIGSDNGSQNSTHSYSAASFGMESWDTPNSIVFSGHPSK 216

Query: 792  RAKTVNGDIAAALSGVDSQFSLPRTSLEMAAVEKLLQIQPDSVPCKIRAKRGFATHPRSI 971
            +A+T +GDI +  + +++QFSLP+TSLEMA VEKLLQI  DSVPCKIRAKRG ATHPRSI
Sbjct: 217  QARTGDGDIYSCFNALETQFSLPQTSLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSI 276

Query: 972  AERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQGEVKKLHKDLDHCTCG 1151
            AERERRTRIS KL+ LQ+LVPNMDKQTS ADML+LAV+HIKGLQ EV+KLHK+L+ CTCG
Sbjct: 277  AERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNEVEKLHKELEGCTCG 336

Query: 1152 CK 1157
            CK
Sbjct: 337  CK 338


>ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
            gi|223533239|gb|EEF34994.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 377

 Score =  306 bits (784), Expect = 1e-80
 Identities = 184/364 (50%), Positives = 222/364 (60%), Gaps = 13/364 (3%)
 Frame = +3

Query: 108  PSSHRPTGPPSLPRYGSAPGSFLASVVDSVIGGTDE--EFPPV-------GSESLMTRYF 260
            P+S  P     L R+GSAPGSFL   VDSVIG T    +F  +        + +   +YF
Sbjct: 42   PTSIAPASGSGLTRFGSAPGSFLTRAVDSVIGTTTSGRDFSALVNNNSNNNNNNSHHQYF 101

Query: 261  S-GDXXXXXXXXXXXCKAAPSTAEIYRTERAGNTGLQRSYGLNQLAVGDLTTASNMRSSX 437
            S GD           CK   S            +GLQRSYG N++               
Sbjct: 102  SAGDSSSLTTEST--CKVNSSND----LRAPAKSGLQRSYGFNEI--------------- 140

Query: 438  XXXXXXXXXPSLIRHSSSPAGFFNH-LGVDNGFTVSRGIGSYGSQAGTSGHGIANGRLAS 614
                      SL+R  SSPAGF +H L  +NGF+++ G G Y S  G +G G    RL S
Sbjct: 141  --------NGSLLRQKSSPAGFLSHHLANENGFSITPGTGGYNSSNGPNG-GHTVSRLKS 191

Query: 615  QLSFTRQDSLSQIXXXXXXXXXXXXXXXXXRNAGQAYGS--FPMGSWDDNNTIMFSSPSN 788
            QLSFTRQDSLSQI                  N+  +Y +  F MGSWD  N+I+FS P +
Sbjct: 192  QLSFTRQDSLSQISEVSEDIVEGINSNTGHHNSPHSYSTTGFGMGSWDGTNSIVFSGPPS 251

Query: 789  KRAKTVNGDIAAALSGVDSQFSLPRTSLEMAAVEKLLQIQPDSVPCKIRAKRGFATHPRS 968
            KR K ++GD+   L+G+++QFSLP+TSLEMA VEKLL I  DSVPCKIRAKRG ATHPRS
Sbjct: 252  KRMKNIDGDLFNCLNGLETQFSLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRS 311

Query: 969  IAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQGEVKKLHKDLDHCTC 1148
            IAERERRTRIS +L+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQGEV+KLHK+L++CTC
Sbjct: 312  IAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTC 371

Query: 1149 GCKP 1160
            GCKP
Sbjct: 372  GCKP 375


>ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
          Length = 370

 Score =  263 bits (671), Expect = 1e-67
 Identities = 169/363 (46%), Positives = 210/363 (57%), Gaps = 15/363 (4%)
 Frame = +3

Query: 123  PTGPPSLPRYGSAPGSFLASVVDSVIGGTDEEFPPV--GSESLMTRYFSGDXXXXXXXXX 296
            P     L RYGSAPGSFL + VDSVIG    +         S    YFS           
Sbjct: 23   PASAGGLTRYGSAPGSFLTTAVDSVIGTRQPDSAATLRAPPSFGAHYFSSADSSVVESSR 82

Query: 297  XXCKAAPSTAEIYRTERAGNTGLQRSYGLNQLAVGDLTTASNMRSSXXXXXXXXXXPSLI 476
               +++ ST+   ++  A    L RSYG N LA+GD +T  N  S+            L+
Sbjct: 83   KVVQSS-STSNDLKSSSATAAALNRSYGFNDLALGDFSTGRNFNSNGGQSSSSSP---LV 138

Query: 477  RHSSSPAGFFNHLGV---DNGFTVSRGIGSYGSQAGTSGHGIANGRLASQLSFTRQD-SL 644
            R  SSPAGF  HL V   + GF+++ G G         G G   GRL SQ+SF  QD SL
Sbjct: 139  RQRSSPAGFLGHLSVAEPNGGFSLTMGGG---------GGGNGGGRLKSQMSFNGQDNSL 189

Query: 645  SQIXXXXXXXXXXXXXXXXX--RNAGQAYGSFPMG------SWD-DNNTIMFSSPSNKRA 797
            SQI                    N    +   P        SWD  +N+I+F++P  KR+
Sbjct: 190  SQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSSNSIVFAAPHAKRS 249

Query: 798  KTVNGDIAAALSGVDSQFSLPRTSLEMAAVEKLLQIQPDSVPCKIRAKRGFATHPRSIAE 977
            K  +   A   +G++SQFSLP+T+LEMAAVE+LLQI  DSVPCKIRAKRG ATHPRSIAE
Sbjct: 250  K--HHSDADFFTGLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAE 307

Query: 978  RERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQGEVKKLHKDLDHCTCGCK 1157
            RERRTRIS KL+KLQELVPNMDKQTS +DMLDLAVQHIKGLQ +++KL+K++++CTCG K
Sbjct: 308  RERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSK 367

Query: 1158 PAL 1166
              L
Sbjct: 368  ECL 370