BLASTX nr result

ID: Cimicifuga21_contig00002036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002036
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304657.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|1...    74   2e-11
ref|XP_002512640.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
gb|ACU23606.1| unknown [Glycine max]                                   69   4e-10
ref|XP_003620972.1| Humj1 [Medicago truncatula] gi|217075434|gb|...    66   3e-09

>ref|XP_002304657.1| predicted protein [Populus trichocarpa] gi|222842089|gb|EEE79636.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/92 (36%), Positives = 46/92 (50%)
 Frame = -3

Query: 277 LSSEWEQCLDLKTGEVYYVNWKNGAKSKEDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 98
           L   WEQCLDLKTGE+YY+NW+NG K++EDP                             
Sbjct: 61  LPYHWEQCLDLKTGEIYYINWRNGMKAREDPRITQDYNGDFYSEDDSSYDSEESSSESSP 120

Query: 97  XXXXXXXXXSFERDNQVVVVAGCRNCLMYFML 2
                      E+++ V+VVAGC++C MYFM+
Sbjct: 121 PSSREHFNNRLEKEDHVLVVAGCKSCFMYFMV 152


>ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|118485800|gb|ABK94748.1|
           unknown [Populus trichocarpa]
           gi|222845121|gb|EEE82668.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/92 (36%), Positives = 46/92 (50%)
 Frame = -3

Query: 277 LSSEWEQCLDLKTGEVYYVNWKNGAKSKEDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 98
           L   WEQCLDLKTGEVYY+NW+NG K++EDP                             
Sbjct: 70  LPYHWEQCLDLKTGEVYYINWRNGMKAREDPRITQEYNGDFYSEDDSSYDSEESSSESSP 129

Query: 97  XXXXXXXXXSFERDNQVVVVAGCRNCLMYFML 2
                      ++++ V+VVAGC++C MYFM+
Sbjct: 130 SSSREHYHNRLQKEDHVLVVAGCKSCFMYFMV 161


>ref|XP_002512640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548601|gb|EEF50092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 LSSEWEQCLDLKTGEVYYVNWKNGAKSKEDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 98
           L   WEQCLDLKTGE+YY+NW+NG K+KEDP                             
Sbjct: 82  LPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVTQEYSGDYYSEDESSYDSEESSSESSP 141

Query: 97  XXXXXXXXXSFE-RDNQVVVVAGCRNCLMYFML 2
                      E +++ V+VVAGC++CLMYFM+
Sbjct: 142 PSSREHYTSRGEQKEDHVLVVAGCKSCLMYFMV 174


>gb|ACU23606.1| unknown [Glycine max]
          Length = 197

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
 Frame = -3

Query: 277 LSSEWEQCLDLKTGEVYYVNWKNGAKSKEDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 98
           L   WEQCLDLKTGE+YY+NW+NG K+KEDP                             
Sbjct: 72  LPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSRRADYSVSRDCESEEEEEEESWYDSEE 131

Query: 97  XXXXXXXXXSFE---------RDNQVVVVAGCRNCLMYFML 2
                    S E         ++N V+VVAGC+ CLMYFM+
Sbjct: 132 SSSESCPSSSKEHYDEGQVEKQNNNVLVVAGCKGCLMYFMV 172


>ref|XP_003620972.1| Humj1 [Medicago truncatula] gi|217075434|gb|ACJ86077.1| unknown
           [Medicago truncatula] gi|355495987|gb|AES77190.1| Humj1
           [Medicago truncatula] gi|388491708|gb|AFK33920.1|
           unknown [Medicago truncatula]
          Length = 198

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
 Frame = -3

Query: 277 LSSEWEQCLDLKTGEVYYVNWKNGAKSKEDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 98
           L   WEQCLDLKTGE+YY+NW+NG K+KEDP                             
Sbjct: 75  LPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRRAAERECEESEEEEEEEEEESWYDSEES 134

Query: 97  XXXXXXXXXSFERDNQ-------VVVVAGCRNCLMYFML 2
                      + D +       V+VVAGC+ CLMYFM+
Sbjct: 135 SSESSTIISKEQYDQREVIEKQNVLVVAGCKICLMYFMV 173


Top