BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002033
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   238   2e-60
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   222   7e-56
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin...   221   2e-55
gb|AFK44002.1| unknown [Lotus japonicus]                              219   5e-55
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido...   218   1e-54

>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  238 bits (606), Expect = 2e-60
 Identities = 120/160 (75%), Positives = 129/160 (80%), Gaps = 1/160 (0%)
 Frame = +2

Query: 227 PNRSNGFSIKALTLDXXXXXXXXXXXXXD-PQSSPGSSIALAEEKEEPQCPPGLRQYETM 403
           P R+ G SI+ALTLD             D P S PG  IA  E+K+EPQCPPGLRQYETM
Sbjct: 40  PRRAPGLSIRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETM 99

Query: 404 VVLRPDMSEDERLALTQKYEELIIAGGGMYVEIFNRGVIPLAYSIKKKNKAGESNTYLDG 583
            VLRPDMSEDERLALTQKYEEL++AGGGMYVE+FNRGVIPLAYSIKKKNKAGESNTYLDG
Sbjct: 100 AVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDG 159

Query: 584 IYLLFTYFTNPDSMALLETRLKKDDSVIRSSSFKIRKRKY 703
           IYLLFTYFT P+SM +LE  L  DD VIRSSSFKIRKRKY
Sbjct: 160 IYLLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRKRKY 199


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  222 bits (566), Expect = 7e-56
 Identities = 118/176 (67%), Positives = 133/176 (75%), Gaps = 5/176 (2%)
 Frame = +2

Query: 191 RTLRTKIDQQR---RPNRSN-GFSIKALTLDXXXXXXXXXXXXXDPQSSPGS-SIALAEE 355
           RT +T   + R    P R++ GFSI+A TLD             D  SSPG       EE
Sbjct: 39  RTPKTLFAESRFHFHPKRNDYGFSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEE 98

Query: 356 KEEPQCPPGLRQYETMVVLRPDMSEDERLALTQKYEELIIAGGGMYVEIFNRGVIPLAYS 535
           KEEPQCPPGLRQYETM+VLRPDMSEDERLALTQKYEE+++AGGGMYVE+FNRGVIPLAYS
Sbjct: 99  KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYS 158

Query: 536 IKKKNKAGESNTYLDGIYLLFTYFTNPDSMALLETRLKKDDSVIRSSSFKIRKRKY 703
           IKKKNKAGE+NTYLDGIYLLFTYFT P+S+  LE  +  DD+VIRS S KIRKRKY
Sbjct: 159 IKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
           gi|255625673|gb|ACU13181.1| unknown [Glycine max]
          Length = 214

 Score =  221 bits (562), Expect = 2e-55
 Identities = 116/173 (67%), Positives = 131/173 (75%), Gaps = 2/173 (1%)
 Frame = +2

Query: 191 RTLRTKIDQQRRPNRSN-GFSIKALTLDXXXXXXXXXXXXXDPQSSPGS-SIALAEEKEE 364
           +TL  +      P R++ GFSI+A TLD             D  SSPG       EEKEE
Sbjct: 42  KTLFAESKSHFYPKRNDHGFSIRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEKEE 101

Query: 365 PQCPPGLRQYETMVVLRPDMSEDERLALTQKYEELIIAGGGMYVEIFNRGVIPLAYSIKK 544
           PQCPPGLRQYETM+VLRPDMSEDERLALTQKYEE+++AGGGMYVE+FNRGVIPLAYSIKK
Sbjct: 102 PQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKK 161

Query: 545 KNKAGESNTYLDGIYLLFTYFTNPDSMALLETRLKKDDSVIRSSSFKIRKRKY 703
           KNKAGE+NTYLDGIYLLFTYFT P+S+  LE  +  DD+VIRS S KIRKRKY
Sbjct: 162 KNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>gb|AFK44002.1| unknown [Lotus japonicus]
          Length = 209

 Score =  219 bits (559), Expect = 5e-55
 Identities = 107/152 (70%), Positives = 122/152 (80%)
 Frame = +2

Query: 248 SIKALTLDXXXXXXXXXXXXXDPQSSPGSSIALAEEKEEPQCPPGLRQYETMVVLRPDMS 427
           S+KA TLD             D  +S G+ +   EEKEEPQCPPGLRQYETM VLRPDMS
Sbjct: 58  SVKAQTLDFTDSFFEGGLGSEDDLNSSGTGLTATEEKEEPQCPPGLRQYETMAVLRPDMS 117

Query: 428 EDERLALTQKYEELIIAGGGMYVEIFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLFTYF 607
           EDERLALTQKYEEL++AGGGMYVE+FNRGVIPLAYSIKKKNKAGE+NTYLDGIYLL+TYF
Sbjct: 118 EDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYTYF 177

Query: 608 TNPDSMALLETRLKKDDSVIRSSSFKIRKRKY 703
           T P+S+  LE  L  DD V+RS++FKI+KRKY
Sbjct: 178 TKPESIVALEETLLADDDVLRSTTFKIKKRKY 209


>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 211

 Score =  218 bits (556), Expect = 1e-54
 Identities = 111/165 (67%), Positives = 128/165 (77%), Gaps = 2/165 (1%)
 Frame = +2

Query: 215 QQRRPNRSNGFSIKALTLDXXXXXXXXXXXXXD-PQSSPGSSIALA-EEKEEPQCPPGLR 388
           QQ++    + F +K+  LD             D P S PGS ++ A E+K EPQCPPGLR
Sbjct: 46  QQQQKRDGSQFVVKSQALDFSGTFFEGGFGSDDDPTSPPGSGVSTALEDKPEPQCPPGLR 105

Query: 389 QYETMVVLRPDMSEDERLALTQKYEELIIAGGGMYVEIFNRGVIPLAYSIKKKNKAGESN 568
           QYETM VLRPDMSEDERL LTQKYEEL++AGGGMYVE+FNRGVIPLAYSI+KKNKAGE+N
Sbjct: 106 QYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETN 165

Query: 569 TYLDGIYLLFTYFTNPDSMALLETRLKKDDSVIRSSSFKIRKRKY 703
           TYLDGIYLLFTYFT P+S+  LET L  DD +IRSSSFKI+KRKY
Sbjct: 166 TYLDGIYLLFTYFTKPESITPLETVLTADDDIIRSSSFKIKKRKY 210