BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002028
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   286   3e-75
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   285   5e-75
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   284   1e-74
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...   283   3e-74
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   282   5e-74

>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  286 bits (732), Expect = 3e-75
 Identities = 148/196 (75%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 GKAVKLAPSASELLGEGRITMRKTAAKPKTV-SSSPWYGPDRVKYLGPFSGEAPSYLTGE 411
           GKAVKL P+ASE++GEGRITMRKTA KPKTV SSSPWYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 15  GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 410 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVXXXXXXXXX 231
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGV         
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV--------- 125

Query: 230 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNPSLVHAQSILAIWATQVILMGAVEGYRI 51
                                        LGNPSLVHAQSILAIWA QVILMGAVEGYRI
Sbjct: 126 -------KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRI 178

Query: 50  AGGPLGEVEDPLYPGG 3
           AGGPLGEV DPLYPGG
Sbjct: 179 AGGPLGEVVDPLYPGG 194


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  285 bits (730), Expect = 5e-75
 Identities = 146/196 (74%), Positives = 153/196 (78%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 GKAVKLAPSASELLGEGRITMRKTAAKPKTVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 411
           G+A+KLAPS+S+LLGEGR+TMRKTA +PK VSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 410 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVXXXXXXXXX 231
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV         
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV--------- 125

Query: 230 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNPSLVHAQSILAIWATQVILMGAVEGYRI 51
                                        LGNPSLVHAQSILAIWATQVILMGAVEGYRI
Sbjct: 126 -------KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 178

Query: 50  AGGPLGEVEDPLYPGG 3
           AGGPLGEV DP+YPGG
Sbjct: 179 AGGPLGEVTDPIYPGG 194


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  284 bits (727), Expect = 1e-74
 Identities = 146/196 (74%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 GKAVKLAPSASELLGEGRITMRKTAAKPKTVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 411
           GKA+KL P+ASE+LGEGR+TMRKTA KPK VSS SPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 15  GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 410 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVXXXXXXXXX 231
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGV         
Sbjct: 75  FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGV--------- 125

Query: 230 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNPSLVHAQSILAIWATQVILMGAVEGYRI 51
                                        LGNPSLVHAQSILAIWA QVILMGAVEGYRI
Sbjct: 126 -------KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRI 178

Query: 50  AGGPLGEVEDPLYPGG 3
           AGGPLGEV DPLYPGG
Sbjct: 179 AGGPLGEVVDPLYPGG 194


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score =  283 bits (723), Expect = 3e-74
 Identities = 145/196 (73%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 GKAVKLAPSASELLGEGRITMRKTAAKPKTVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 411
           GKAVKLAP+ASE+ GEGR++MRKTA KPK VSS SPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 14  GKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 73

Query: 410 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVXXXXXXXXX 231
           F GDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVFPELLARNGV         
Sbjct: 74  FAGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLARNGV--------- 124

Query: 230 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNPSLVHAQSILAIWATQVILMGAVEGYRI 51
                                        LGNPSLVHAQSILAIWATQV+LMGAVEGYR+
Sbjct: 125 -------KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRV 177

Query: 50  AGGPLGEVEDPLYPGG 3
           AGGPLGEV DPLYPGG
Sbjct: 178 AGGPLGEVVDPLYPGG 193


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  282 bits (721), Expect = 5e-74
 Identities = 144/196 (73%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 GKAVKLAPSASELLGEGRITMRKTAAKPKTVSS-SPWYGPDRVKYLGPFSGEAPSYLTGE 411
           G+AVKL+P+AS+LLGEGRITMRKTA KPK VSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 410 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVXXXXXXXXX 231
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGV         
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV--------- 125

Query: 230 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNPSLVHAQSILAIWATQVILMGAVEGYRI 51
                                        LGNPSLVHAQSILAIWA QV+LMGAVEGYRI
Sbjct: 126 -------KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 178

Query: 50  AGGPLGEVEDPLYPGG 3
           AGGPLGE+ DP+YPGG
Sbjct: 179 AGGPLGEITDPIYPGG 194