BLASTX nr result

ID: Cimicifuga21_contig00002027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002027
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1...   432   e-118
ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118
emb|CAN76920.1| hypothetical protein VITISV_015622 [Vitis vinifera]   424   e-116
ref|XP_002523862.1| ccr4-associated factor, putative [Ricinus co...   410   e-112
ref|XP_003543421.1| PREDICTED: probable CCR4-associated factor 1...   407   e-111

>ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1 homolog 9-like [Vitis
           vinifera]
          Length = 278

 Score =  432 bits (1110), Expect = e-118
 Identities = 212/280 (75%), Positives = 239/280 (85%), Gaps = 2/280 (0%)
 Frame = -2

Query: 963 MSTEES--KEKPIVIREVYADNLDAEFELIGDLIDLFPYSSMDTEFPGIVYRPDDDSSMI 790
           M +E+S    KP++IREV+A+NL++EFELI DLID +P+ SMDTEFPG+V+RP       
Sbjct: 1   MFSEDSDCNSKPVMIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQF 60

Query: 789 PYMHRFQPADHYLILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDVTK 610
                 +P+DHY  LKSNVDAL LIQVGLTLSDA GNLPDLGTGNRFIWEFNFRDFDV +
Sbjct: 61  RLR---RPSDHYRFLKSNVDALCLIQVGLTLSDANGNLPDLGTGNRFIWEFNFRDFDVAR 117

Query: 609 DVHATDSIELLRRQGIDFERNIEEGIDSRRFAELMMASGLVCNDSVSWVTFHSAYDFGYL 430
           D HA DSIELL RQGIDF+RN EEG+DS RFAELMM+SGLVCN+SVSWVTFHSAYDFGYL
Sbjct: 118 DAHAPDSIELLSRQGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYL 177

Query: 429 VKILTSRCLPEDIGDFLSLLRVFFGTKVYDVKHLMKYCESLYGGLDRVARTLDVDRAVGK 250
           VKILT R LP  + +FLS+LRVFFGTKVYDVKHLMK+C SLYGGLDRVARTL+VDRAVGK
Sbjct: 178 VKILTRRSLPSGLEEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGK 237

Query: 249 CHQAGSDSLLTWHAFQKIREMYFGNKGPEEYAGVLYGLEV 130
           CHQAGSDSLLTWHAFQKIR++YF   G E+YAGVLYGLEV
Sbjct: 238 CHQAGSDSLLTWHAFQKIRDVYFEKDGTEKYAGVLYGLEV 277


>ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|222837629|gb|EEE75994.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  431 bits (1109), Expect = e-118
 Identities = 213/276 (77%), Positives = 243/276 (88%), Gaps = 1/276 (0%)
 Frame = -2

Query: 954 EESKEKPIVIREVYADNLDAEFELIGDLIDLFPYSSMDTEFPGIVYRPD-DDSSMIPYMH 778
           EESKE  IVIREV++ NL++EFELI DLID FP+ SMDTEFPG+V+RP  D ++   Y  
Sbjct: 2   EESKE--IVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTNNRNYFR 59

Query: 777 RFQPADHYLILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDVTKDVHA 598
           + +P+DHY ILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDV +D HA
Sbjct: 60  QLKPSDHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDVERDSHA 119

Query: 597 TDSIELLRRQGIDFERNIEEGIDSRRFAELMMASGLVCNDSVSWVTFHSAYDFGYLVKIL 418
            DSIELLRRQGIDFERN EEG+DS RFAELMM+SGLVCN+SVSWVTFHSAYDFGYLVKIL
Sbjct: 120 PDSIELLRRQGIDFERNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKIL 179

Query: 417 TSRCLPEDIGDFLSLLRVFFGTKVYDVKHLMKYCESLYGGLDRVARTLDVDRAVGKCHQA 238
           T R LP  +  FLSLLRVFFG  +YDVKH+M++C+SLYGGLDRVARTL+V+R VGKCHQA
Sbjct: 180 TRRELPSGLVGFLSLLRVFFGNNIYDVKHMMRFCKSLYGGLDRVARTLEVNREVGKCHQA 239

Query: 237 GSDSLLTWHAFQKIREMYFGNKGPEEYAGVLYGLEV 130
           GSDSLLTWHAFQK+R+++F   GPE++AGVLYGLEV
Sbjct: 240 GSDSLLTWHAFQKMRDVFFVKDGPEQHAGVLYGLEV 275


>emb|CAN76920.1| hypothetical protein VITISV_015622 [Vitis vinifera]
          Length = 265

 Score =  424 bits (1090), Expect = e-116
 Identities = 206/267 (77%), Positives = 231/267 (86%)
 Frame = -2

Query: 930 VIREVYADNLDAEFELIGDLIDLFPYSSMDTEFPGIVYRPDDDSSMIPYMHRFQPADHYL 751
           +IREV+A+NL++EFELI DLID +P+ SMDTEFPG+V+RP             +P+DHY 
Sbjct: 1   MIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLR---RPSDHYR 57

Query: 750 ILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDVTKDVHATDSIELLRR 571
            LKSNVDAL LIQVGLTLSDA GNLPDLGTGNRFIWEFNFRDFDV +D H+ DSIELL R
Sbjct: 58  FLKSNVDALCLIQVGLTLSDANGNLPDLGTGNRFIWEFNFRDFDVARDAHSPDSIELLSR 117

Query: 570 QGIDFERNIEEGIDSRRFAELMMASGLVCNDSVSWVTFHSAYDFGYLVKILTSRCLPEDI 391
           QGIDF+RN EEG+DS RFAELMM+SGLVCN+SVSWVTFHSAYDFGYLVKILT R LP  +
Sbjct: 118 QGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGL 177

Query: 390 GDFLSLLRVFFGTKVYDVKHLMKYCESLYGGLDRVARTLDVDRAVGKCHQAGSDSLLTWH 211
            +FLS+LRVFFGTKVYDVKHLMK+C SLYGGLDRVARTL+VDRAVGKCHQAGSDSLLTWH
Sbjct: 178 EEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQAGSDSLLTWH 237

Query: 210 AFQKIREMYFGNKGPEEYAGVLYGLEV 130
           AFQKIR++YF   G E+YAGVLYGLEV
Sbjct: 238 AFQKIRDVYFEKDGTEKYAGVLYGLEV 264


>ref|XP_002523862.1| ccr4-associated factor, putative [Ricinus communis]
           gi|223536950|gb|EEF38588.1| ccr4-associated factor,
           putative [Ricinus communis]
          Length = 281

 Score =  410 bits (1055), Expect = e-112
 Identities = 197/282 (69%), Positives = 234/282 (82%)
 Frame = -2

Query: 978 INRSVMSTEESKEKPIVIREVYADNLDAEFELIGDLIDLFPYSSMDTEFPGIVYRPDDDS 799
           +  S  S   +  KP++IR+V++ NL++EF+LI DLID FP  SMDTEFPG+V++     
Sbjct: 3   LQHSSRSVSSNHNKPVIIRDVWSHNLESEFQLIRDLIDDFPIISMDTEFPGLVFKNPH-- 60

Query: 798 SMIPYMHRFQPADHYLILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFD 619
                 H  +P+DHY +LKSNVDALNLIQVGLTLSD+ GNLPDL T  RFIWEFNFRDFD
Sbjct: 61  ------HSRRPSDHYTLLKSNVDALNLIQVGLTLSDSRGNLPDLATATRFIWEFNFRDFD 114

Query: 618 VTKDVHATDSIELLRRQGIDFERNIEEGIDSRRFAELMMASGLVCNDSVSWVTFHSAYDF 439
           V++D HA DSIELLRRQGIDF RN +EGI S RFAELMM+SGLVCNDSVSWVTFHSAYDF
Sbjct: 115 VSRDAHAPDSIELLRRQGIDFRRNTQEGIPSARFAELMMSSGLVCNDSVSWVTFHSAYDF 174

Query: 438 GYLVKILTSRCLPEDIGDFLSLLRVFFGTKVYDVKHLMKYCESLYGGLDRVARTLDVDRA 259
           GYLVKILT R LP  + +F+ L++VFFG +VYDVKH+M++C SLYGGLDRVARTL+VDRA
Sbjct: 175 GYLVKILTRRSLPGGLEEFMRLVKVFFGDRVYDVKHIMRFCHSLYGGLDRVARTLEVDRA 234

Query: 258 VGKCHQAGSDSLLTWHAFQKIREMYFGNKGPEEYAGVLYGLE 133
           VGKCHQAGSDSLLTWHAFQK+R++YF  +GPE++AGVLYGLE
Sbjct: 235 VGKCHQAGSDSLLTWHAFQKMRDVYFHKEGPEKHAGVLYGLE 276


>ref|XP_003543421.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like
           [Glycine max]
          Length = 312

 Score =  407 bits (1045), Expect = e-111
 Identities = 191/279 (68%), Positives = 233/279 (83%)
 Frame = -2

Query: 966 VMSTEESKEKPIVIREVYADNLDAEFELIGDLIDLFPYSSMDTEFPGIVYRPDDDSSMIP 787
           V+    +  KPIVIREV+A NL++EFE+I ++ID +P+ SMDTEFPG+V+RP       P
Sbjct: 29  VIVENPNSSKPIVIREVWASNLESEFEVIREVIDDYPFISMDTEFPGVVFRPHVVDPTKP 88

Query: 786 YMHRFQPADHYLILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDVTKD 607
           Y+ R +P+DHY  LK NVDALNLIQVG+TLSDA+GNLP L TGNRFIWEFNFRDFD+ +D
Sbjct: 89  YLFRLRPSDHYRFLKFNVDALNLIQVGITLSDADGNLPHLETGNRFIWEFNFRDFDIDRD 148

Query: 606 VHATDSIELLRRQGIDFERNIEEGIDSRRFAELMMASGLVCNDSVSWVTFHSAYDFGYLV 427
            +A+DSI+LLRRQGIDF RN  EGIDS  FAEL+M+SGLVCNDSVSWVTFHSAYDFGYLV
Sbjct: 149 DYASDSIDLLRRQGIDFRRNTAEGIDSNLFAELVMSSGLVCNDSVSWVTFHSAYDFGYLV 208

Query: 426 KILTSRCLPEDIGDFLSLLRVFFGTKVYDVKHLMKYCESLYGGLDRVARTLDVDRAVGKC 247
           KILT R LP  + +FL +LR FFG  VYD+KH+M++C++LYGGLDR+ARTL+VDRAVGKC
Sbjct: 209 KILTRRNLPNGLEEFLKMLRAFFGNNVYDIKHMMQFCDTLYGGLDRLARTLNVDRAVGKC 268

Query: 246 HQAGSDSLLTWHAFQKIREMYFGNKGPEEYAGVLYGLEV 130
           HQAGSDSLLTWH FQK+R++YF   GP ++ GVL+GLE+
Sbjct: 269 HQAGSDSLLTWHVFQKMRDIYFVKDGPHKHVGVLFGLEL 307


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