BLASTX nr result

ID: Cimicifuga21_contig00002020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002020
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283816.1| PREDICTED: uncharacterized protein LOC100247...    69   3e-09
emb|CAN71058.1| hypothetical protein VITISV_030011 [Vitis vinifera]    69   3e-09
ref|XP_002307541.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-08
ref|XP_002300884.1| predicted protein [Populus trichocarpa] gi|2...    61   5e-07
ref|NP_172140.1| tropomyosin-related protein [Arabidopsis thalia...    60   1e-06

>ref|XP_002283816.1| PREDICTED: uncharacterized protein LOC100247157 [Vitis vinifera]
          Length = 327

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 34/66 (51%), Positives = 48/66 (72%)
 Frame = -3

Query: 1010 LMDEIEELKTDRVETKKRSDEKQKEIDESEADKRALQAISSRAAELEMEVSRLQHDLGST 831
            L  E EE+K+D+ E +K+ +E  +EI+ SE+DK+AL  I +RA ELE EVSRLQHDL S 
Sbjct: 63   LTAESEEMKSDKDEMEKKLEEMMREIERSESDKKALDVIGARAVELETEVSRLQHDLISA 122

Query: 830  MAESGD 813
             +E+ +
Sbjct: 123  SSEADE 128


>emb|CAN71058.1| hypothetical protein VITISV_030011 [Vitis vinifera]
          Length = 480

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 34/66 (51%), Positives = 48/66 (72%)
 Frame = -3

Query: 1010 LMDEIEELKTDRVETKKRSDEKQKEIDESEADKRALQAISSRAAELEMEVSRLQHDLGST 831
            L  E EE+K+D+ E +K+ +E  +EI+ SE+DK+AL  I +RA ELE EVSRLQHDL S 
Sbjct: 216  LTAESEEMKSDKDEMEKKLEEMMREIERSESDKKALDVIGARAVELETEVSRLQHDLISA 275

Query: 830  MAESGD 813
             +E+ +
Sbjct: 276  SSEADE 281


>ref|XP_002307541.1| predicted protein [Populus trichocarpa] gi|222856990|gb|EEE94537.1|
            predicted protein [Populus trichocarpa]
          Length = 303

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 66/246 (26%), Positives = 97/246 (39%), Gaps = 15/246 (6%)
 Frame = -3

Query: 1010 LMDEIEELKTDRVETKKRSDEKQKEIDESEADKRALQAISSRAAELEMEVSRLQHDLGST 831
            L  EIE LK++    K R  E ++E+++SE  +R L++I+ RA ELE   SRLQHDL S 
Sbjct: 61   LAAEIESLKSEESSLKLRIAELEREVEKSEETQRTLESIAGRAVELETSASRLQHDLISA 120

Query: 830  MAESGDLSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISELEKKVAG----- 666
            ++E  +                                      ++  LE K  G     
Sbjct: 121  VSEGDEAHKEAGELKRVVSQKEVKIEEVKKEKAETEMKAKELERKVGVLELKEIGEKNKK 180

Query: 665  --FEDFISVNXXXXXXXXXXXXXXXXXSASNLAALKISEIRVGELQAKVAVLQSKLDELT 492
                + +                      S +A  +  E ++ E + KV  ++ KL EL 
Sbjct: 181  VRLGEEMREKMSEKDMEIFECKKRIEELESQVAEKESLEKKLRETEEKVKEMEGKLVEL- 239

Query: 491  SKNLMNGAAVVGSQTER--------EIKSTEKGLKGLKRHWPVALASTGTXXXXXXXVYI 336
             K +     VVG   ER        EIKS EKG K   +   VA+ S G        +Y+
Sbjct: 240  QKEVQEAEKVVGGLQERTGEVINGIEIKSREKGFK--VQPPVVAIGSVGAILAAAAVIYV 297

Query: 335  GYSRRR 318
             Y+RRR
Sbjct: 298  CYARRR 303


>ref|XP_002300884.1| predicted protein [Populus trichocarpa] gi|222842610|gb|EEE80157.1|
            predicted protein [Populus trichocarpa]
          Length = 303

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -3

Query: 1010 LMDEIEELKTDRVETKKRSDEKQKEIDESEADKRALQAISSRAAELEMEVSRLQHDLGST 831
            L  + E +K++    K R  E ++E+++SE  +RAL++I+ RAAELE  VSRLQHDL S 
Sbjct: 61   LTAKFESMKSEESSLKLRVAELEREVEQSEETQRALESIAGRAAELETNVSRLQHDLISA 120

Query: 830  MAESGDLSN 804
            M+E GD +N
Sbjct: 121  MSE-GDEAN 128


>ref|NP_172140.1| tropomyosin-related protein [Arabidopsis thaliana]
            gi|6692690|gb|AAF24824.1|AC007592_17 F12K11.14
            [Arabidopsis thaliana] gi|332189881|gb|AEE28002.1|
            tropomyosin-related protein [Arabidopsis thaliana]
          Length = 323

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/63 (46%), Positives = 46/63 (73%)
 Frame = -3

Query: 1010 LMDEIEELKTDRVETKKRSDEKQKEIDESEADKRALQAISSRAAELEMEVSRLQHDLGST 831
            L  EIEEL+    + K++  E ++EID+S+ +++ L+AI+SRA+ELE EV+RLQH+L + 
Sbjct: 62   LTAEIEELRGAESKAKRKMGEMEREIDKSDEERKVLEAIASRASELETEVARLQHELITA 121

Query: 830  MAE 822
              E
Sbjct: 122  RTE 124


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