BLASTX nr result

ID: Cimicifuga21_contig00002006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002006
         (2918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31992.3| unnamed protein product [Vitis vinifera]              484   e-134
ref|XP_002271547.2| PREDICTED: uncharacterized protein LOC100246...   476   e-131
ref|XP_002520114.1| myb124, putative [Ricinus communis] gi|22354...   441   e-121
gb|ADL36771.1| MYB domain class transcription factor [Malus x do...   438   e-120
ref|XP_003613635.1| Myb-related protein B [Medicago truncatula] ...   421   e-115

>emb|CBI31992.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  484 bits (1245), Expect = e-134
 Identities = 273/499 (54%), Positives = 331/499 (66%), Gaps = 9/499 (1%)
 Frame = -3

Query: 2583 KQKERHIVTWTQQEDDILREQISIHGTENWAIIAAQFKDKTTRQCRRRWYTYLNSDFKKG 2404
            KQKERHIVTW+QQEDDILREQIS+HGTENWAIIA++FKDKTTRQCRRRWYTYLNSDFKKG
Sbjct: 14   KQKERHIVTWSQQEDDILREQISLHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKG 73

Query: 2403 GWTQEEDMILCEAQKIYGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKENIIL 2224
            GW+ EED+ILCEAQKI+GNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKEN   
Sbjct: 74   GWSPEEDLILCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKEN-ST 132

Query: 2223 SCINQNNKRAIIDNAIIANETSESAPPLKRM-RTHILDITGNCNLKDRLHIKSGTTENQ- 2050
            S IN NNKRA+ +N    + T+E+A  LK+M RTH+ D+T NCN  + L  + GTT NQ 
Sbjct: 133  SYINSNNKRALFNNGFNTDGTTEAAVSLKKMRRTHLPDLTENCNGGETLLSECGTTTNQQ 192

Query: 2049 -RPPFAVLVQNSHNVDDLPDQQNLNNTGTASSDG--NSKVQGTFLRRDDPRINALMQQAE 1879
             RPPFAVLVQN  +V+ LP Q ++ +T   S+D   N+K+QGTFL++DDP+I ALMQQAE
Sbjct: 193  PRPPFAVLVQNFRSVNSLPVQHHVGSTKEVSNDASQNNKIQGTFLKKDDPKITALMQQAE 252

Query: 1878 LLSSLAVKVNTEKNSQSLENAWKELQNFLKLNNEDELLRYQISESDFPFEDLMNLVEE-S 1702
            LLSSLA+KVN E   QSLENAWK  Q+FL    E ++LR+ ISE DF  ED  + VE+  
Sbjct: 253  LLSSLALKVNAENTDQSLENAWKVFQDFLNQTKESDMLRFNISEMDFQLEDFKDWVEDLR 312

Query: 1701 SNMGGSLPCWRQPNXXXXXXXXXXXXXXXXXPHIT-NEKTEQPEAEICSLQQDASVGQQS 1525
            S+  GS P WRQP+                    T  +K EQ + EIC+L Q+  V  Q+
Sbjct: 313  SSTEGSRPSWRQPDLYEESPGSSEYSTGSTLVSQTAGDKIEQTQPEICALHQEIGVRLQT 372

Query: 1524 IIFQDNDGGGCEDVFISSSVASIGPQSNHTEAKNGGSGDGWVDVLNTDASVAQVAHIPSC 1345
            I    N    C    +S      G  +N  E                          PSC
Sbjct: 373  IPMDQNGFEECVKGVLS------GTTTNQAEI------------------------FPSC 402

Query: 1344 DEYKEEEVIPA-LPNTEFTSPVQATPLFKTFAAAIPSPQFSESERHFLMKTL-LGXXXXX 1171
            DE K  +V+ + L +TEF+SP+Q TPLF++ AA IPSP+FSESER+FL++ L +      
Sbjct: 403  DEPKTNDVVASNLSSTEFSSPLQVTPLFRSLAAGIPSPKFSESERNFLLRALGMESPTPN 462

Query: 1170 XXXXXXXXXPCRRALLHSL 1114
                     PC+RALL SL
Sbjct: 463  PSSNPSQPPPCKRALLQSL 481


>ref|XP_002271547.2| PREDICTED: uncharacterized protein LOC100246639 [Vitis vinifera]
          Length = 481

 Score =  476 bits (1224), Expect = e-131
 Identities = 271/502 (53%), Positives = 331/502 (65%), Gaps = 12/502 (2%)
 Frame = -3

Query: 2583 KQKERHIVTWTQQEDDILREQISIHGTENWAIIAAQFKDKTTRQCRRRWYTYLNSDFKKG 2404
            KQKERHIVTW+QQEDDILREQIS+HGTENWAIIA++FKDKTTRQCRRRWYTYLNSDFKKG
Sbjct: 12   KQKERHIVTWSQQEDDILREQISLHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKG 71

Query: 2403 GWTQEEDMILCEAQKIYGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKENIIL 2224
            GW+ EED+ILCEAQKI+GNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKEN   
Sbjct: 72   GWSPEEDLILCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKEN-ST 130

Query: 2223 SCINQNNKRAIIDNAIIANETSESAPPLKRM-RTHILDITGNCNLKDRLHIKSGTTENQ- 2050
            S IN NNKRA+ +N    + T+E+A  LK+M RTH+ D+T NCN  + L  + GTT NQ 
Sbjct: 131  SYINSNNKRALFNNGFNTDGTTEAAVSLKKMRRTHLPDLTENCNGGETLLSECGTTTNQQ 190

Query: 2049 -RPPFAVLVQNSHNVDDLPDQQNLNNTGTASSDG--NSKVQGTFLRRDDPRINALMQQAE 1879
             RPPFAVLVQN  +V+ LP Q ++ +T   S+D   N+K+QGTFL++DDP+I ALMQQAE
Sbjct: 191  PRPPFAVLVQNFRSVNSLPVQHHVGSTKEVSNDASQNNKIQGTFLKKDDPKITALMQQAE 250

Query: 1878 LLSSLAVKVNTEKNSQSLENAWKELQNFLKLNNEDELLRYQISESDFPFEDLMNLVEE-S 1702
            LLSSLA+KVN E   QSLENAWK  Q+FL    E ++LR+ ISE DF  ED  + VE+  
Sbjct: 251  LLSSLALKVNAENTDQSLENAWKVFQDFLNQTKESDMLRFNISEMDFQLEDFKDWVEDLR 310

Query: 1701 SNMGGSLPCW---RQPNXXXXXXXXXXXXXXXXXPHIT-NEKTEQPEAEICSLQQDASVG 1534
            S+  GS P W   RQP+                    T  +K EQ + EIC+L Q+  V 
Sbjct: 311  SSTEGSRPSWRHHRQPDLYEESPGSSEYSTGSTLVSQTAGDKIEQTQPEICALHQEIGVR 370

Query: 1533 QQSIIFQDNDGGGCEDVFISSSVASIGPQSNHTEAKNGGSGDGWVDVLNTDASVAQVAHI 1354
             Q+I    N    C    +S +                           T+  +      
Sbjct: 371  LQTIPMDQNGFEECVKGVLSGT--------------------------TTNQEI-----F 399

Query: 1353 PSCDEYKEEEVIPA-LPNTEFTSPVQATPLFKTFAAAIPSPQFSESERHFLMKTL-LGXX 1180
            PSCDE K  +V+ + L +TEF+SP+Q TPLF++ AA IPSP+FSESER+FL++ L +   
Sbjct: 400  PSCDEPKTNDVVASNLSSTEFSSPLQVTPLFRSLAAGIPSPKFSESERNFLLRALGMESP 459

Query: 1179 XXXXXXXXXXXXPCRRALLHSL 1114
                        PC+RALL SL
Sbjct: 460  TPNPSSNPSQPPPCKRALLQSL 481


>ref|XP_002520114.1| myb124, putative [Ricinus communis] gi|223540606|gb|EEF42169.1|
            myb124, putative [Ricinus communis]
          Length = 505

 Score =  441 bits (1134), Expect = e-121
 Identities = 244/471 (51%), Positives = 308/471 (65%), Gaps = 5/471 (1%)
 Frame = -3

Query: 2583 KQKERHIVTWTQQEDDILREQISIHGTENWAIIAAQFKDKTTRQCRRRWYTYLNSDFKKG 2404
            K+KERHIVTWTQQEDDILR+QIS+HGTENWAIIA++FKDKTTRQCRRRWYTYLNSDFKKG
Sbjct: 16   KKKERHIVTWTQQEDDILRQQISLHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKG 75

Query: 2403 GWTQEEDMILCEAQKIYGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKENIIL 2224
            GW+ EED++LCEAQKI+GNRWTEIAKVVSGRTDNAVKNRF+TLCKKRAK+EALAKEN   
Sbjct: 76   GWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFTTLCKKRAKYEALAKEN-KS 134

Query: 2223 SCINQNNKRAIIDNAIIANETSESAPPLKR-MRTHILDITGNCNLKDRLHIKSGTTENQR 2047
            + +N NNKR +  N   A+ + E APP K+  R+HI+D T +  L +R H++ G  +  R
Sbjct: 135  TYVNSNNKRILFQNGYSADGSPEKAPPAKKTRRSHIIDRTEHYKLANRSHLQGG-NQQSR 193

Query: 2046 PPFAVLVQNSHNVDDLPDQQNLNNTGTASSDGNSKVQGTFLRRDDPRINALMQQAELLSS 1867
            PPFAVL QN HNV+       +N         NSK++ TFLR+DDP+I ALMQQAELLSS
Sbjct: 194  PPFAVLAQNFHNVNVAAQHTAVNAKEVLIDAENSKIEATFLRKDDPKITALMQQAELLSS 253

Query: 1866 LAVKVNTEKNSQSLENAWKELQNFLKLNNEDELLRYQISESDFPFEDLMNLVEE-SSNMG 1690
            LA+KVNTE   QSLENAWK LQ+FL  + E+++L Y+IS+ DF  ED  +L+E+  S+  
Sbjct: 254  LALKVNTENTDQSLENAWKVLQDFLNRSKENDILGYRISDIDFQLEDFKDLIEDLRSSYD 313

Query: 1689 GSLPCWRQPNXXXXXXXXXXXXXXXXXPHIT-NEKTEQPEAEICSLQQDASVGQQSIIFQ 1513
            GS P WRQP+                    T  +KTEQ +AEI  + +D     QS+  +
Sbjct: 314  GSRPSWRQPDLYEDSPASSDYSTGSTLMPYTAPDKTEQAQAEIGEVHKDIGNELQSVNAE 373

Query: 1512 D-NDGGGCEDVFISSSVASIGPQSNHTEAKNGGSGDGWVDVLNTDASVAQVAHIPSCDEY 1336
            + ND   CE   I                                AS++Q    PS DE 
Sbjct: 374  EQNDVDECEKEIIPC------------------------------ASISQGEIFPSFDEQ 403

Query: 1335 KEEE-VIPALPNTEFTSPVQATPLFKTFAAAIPSPQFSESERHFLMKTLLG 1186
               + V+ A  ++EF+SP+Q TP+F++ AA IPSP+FSES     + T+ G
Sbjct: 404  TNNDVVVSASSSSEFSSPLQVTPIFRSLAAGIPSPKFSESAYELHLITISG 454


>gb|ADL36771.1| MYB domain class transcription factor [Malus x domestica]
          Length = 469

 Score =  438 bits (1126), Expect = e-120
 Identities = 260/502 (51%), Positives = 316/502 (62%), Gaps = 12/502 (2%)
 Frame = -3

Query: 2583 KQKERHIVTWTQQEDDILREQISIHGTENWAIIAAQFKDKTTRQCRRRWYTYLNSDFKKG 2404
            K+KERHIVTW+Q+EDDILR QIS HGTENWAIIA++FKDKTTRQCRRRWYTYLNSDFKKG
Sbjct: 7    KKKERHIVTWSQEEDDILRNQISTHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKG 66

Query: 2403 GWTQEEDMILCEAQKIYGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKENIIL 2224
            GW+ EEDM+LCEAQKI+GNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAK+EALAKEN   
Sbjct: 67   GWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKEN-AA 125

Query: 2223 SCINQNNKRAIIDNAIIANETSESAPPLKRM-RTHILDITGNCNLKDRLHIKSGTTENQ- 2050
            S INQN+KR II N    + T+E+  P K+M R+HI  ++      DRL  + G    Q 
Sbjct: 126  SHINQNDKRVIIRNGFNTDGTAETTAPSKKMRRSHIPSLSEG----DRLLEQCGKMSQQL 181

Query: 2049 RPPFAVLVQNSHNVDDLPDQQNLNNTGTASSDG--NSKVQGTFLRRDDPRINALMQQAEL 1876
            R PFAVL+QN HNV++LPDQ N+N T     +    SK  G+FL++DDP+I ALMQQAEL
Sbjct: 182  RAPFAVLIQNVHNVENLPDQNNVNGTKEVPVNAVQKSKFHGSFLKKDDPKIIALMQQAEL 241

Query: 1875 LSSLAVKVNTEKNSQSLENAWKELQNFLKLNNEDELLRYQISESDFPFEDLMNLVEE-SS 1699
            LSSLA+KVN E   QSLENAWK LQ+FL  + + ++L Y I++ DF  EDL  L+E+  S
Sbjct: 242  LSSLALKVNAENTDQSLENAWKVLQDFLNQSKDSDILSYGINDFDFQLEDLKYLLEDLRS 301

Query: 1698 NMGGSLPCW---RQPNXXXXXXXXXXXXXXXXXPHITN-EKTEQPEAEICSLQQDASVGQ 1531
               GS P W   RQP+                    T   + E+ E EI SL Q+   G 
Sbjct: 302  TTEGSRPSWQHCRQPDLYEESPGSSEYSTGSTLLSQTEYYQVEKNEVEIGSLNQEIRPGS 361

Query: 1530 QSIIFQDNDG-GGCEDVFISSSVASIGPQSNHTEAKNGGSGDGWVDVLNTDASVAQVAHI 1354
            QSI  +  +G G CE    S                                   +    
Sbjct: 362  QSIPIEGKNGVGDCEKGIFSE----------------------------------KQEIF 387

Query: 1353 PSCDE-YKEEEVIPALPNTEFTSPVQATPLFKTFAAAIPSPQFSESERHFLMKTL-LGXX 1180
            PSCDE  K+  V+ AL + EF SP++ TPLF++ AA IPSP+FSESER+FL+KTL     
Sbjct: 388  PSCDEATKDYAVVSALSSIEFNSPIKVTPLFRSLAAGIPSPKFSESERNFLLKTLGEDSP 447

Query: 1179 XXXXXXXXXXXXPCRRALLHSL 1114
                        PC+R+LL SL
Sbjct: 448  CPNPSTNPSQPPPCKRSLLQSL 469


>ref|XP_003613635.1| Myb-related protein B [Medicago truncatula]
            gi|87241137|gb|ABD32995.1| Homeodomain-related [Medicago
            truncatula] gi|355514970|gb|AES96593.1| Myb-related
            protein B [Medicago truncatula]
          Length = 466

 Score =  421 bits (1082), Expect = e-115
 Identities = 248/495 (50%), Positives = 308/495 (62%), Gaps = 6/495 (1%)
 Frame = -3

Query: 2583 KQKERHIVTWTQQEDDILREQISIHGTENWAIIAAQFKDKTTRQCRRRWYTYLNSDFKKG 2404
            K+KERHIVTWTQ+EDDILR+QI IHGTENWAIIA++FKDKTTRQCRRRWYTYLNSDFKKG
Sbjct: 20   KKKERHIVTWTQEEDDILRDQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKG 79

Query: 2403 GWTQEEDMILCEAQKIYGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKHEALAKENIIL 2224
            GW+ EEDM+LCEAQKI+GNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAK+EALAKEN I 
Sbjct: 80   GWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNI- 138

Query: 2223 SCINQNNKRAIIDNAIIANETSESAPPLKRM-RTHILDITGNCNLKDRLHIKSGTTENQR 2047
            S  N NNKR      I  +E S+SA   K+M R+HI D        D+ H ++   E  R
Sbjct: 139  SYTNSNNKR-----IIFRDEASDSAVDYKKMRRSHIPDGAEKVGFADKSHKQN---ETSR 190

Query: 2046 PPFAVLVQNSHNVDDLPDQQNLNNTGTASSDGNSKVQGTFLRRDDPRINALMQQAELLSS 1867
             P AVL QN+HN ++LPD  ++ N   +    N+K+QGTFL++DDP+INALMQQAELL+S
Sbjct: 191  APLAVLAQNTHNANNLPDHNHVCNVKFSGYAQNNKIQGTFLKKDDPKINALMQQAELLTS 250

Query: 1866 LAVKVNTEKNSQSLENAWKELQNFLKLNNEDELLRYQISESDFPFEDLMNLVEESSNMGG 1687
            LA+KV+ E   QSLENAWK LQ F+  N E ++  Y+I   D    DL +L+++  N   
Sbjct: 251  LALKVDAENMDQSLENAWKILQEFMNRNKESDVSGYKI--PDLQLVDLKDLLQDLKNNSE 308

Query: 1686 SL-PCWRQPN-XXXXXXXXXXXXXXXXXPHITNEKTEQPEAEICSLQQDASVGQQSI-IF 1516
             + PCWR                     PH T E  E       SL QD+    +SI I 
Sbjct: 309  EIEPCWRYMEFYEDSPESSEHSTGSTTLPHCTGENLEH------SLHQDSGTELKSIQIE 362

Query: 1515 QDNDGGGCEDVFISSSVASIGPQSNHTEAKNGGSGDGWVDVLNTDASVAQVAHIPSCDE- 1339
               + GGC+ V +SS+                         L+ D          SC+E 
Sbjct: 363  HQKEIGGCDHVILSSA------------------------TLDQDI-------FSSCEEQ 391

Query: 1338 YKEEEVIPALPNTEFTSPVQATPLFKTFAAAIPSPQFSESERHFLMKTL-LGXXXXXXXX 1162
               + ++ +L + EF+SP+Q TP+F++ AA IPSPQFSESER+FLMKTL +         
Sbjct: 392  INNDGIVCSLSSAEFSSPLQVTPMFRSLAAGIPSPQFSESERNFLMKTLGMDSPSLNPIA 451

Query: 1161 XXXXXXPCRRALLHS 1117
                   C+RALL S
Sbjct: 452  NPSQPPLCKRALLQS 466


Top