BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002000
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620898.1| RNA polymerase II C-terminal domain phosphat...    77   1e-12
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...    76   2e-12
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...    76   2e-12
ref|XP_002324546.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002324547.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12

>ref|XP_003620898.1| RNA polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula] gi|355495913|gb|AES77116.1| RNA
           polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula]
          Length = 720

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/63 (55%), Positives = 49/63 (77%)
 Frame = -3

Query: 194 YILKHLNTATKLRPSVRSFLKQANEMFELHIYTMGGIDYARDMVNLLDPGKLYFRNKVYS 15
           ++L+H+   TKLRP VR+FLK+A+EMFE++IYTMG   Y+ +M  LLDP   YF++KV S
Sbjct: 259 FMLEHVQVMTKLRPFVRTFLKEASEMFEMYIYTMGDRQYSLEMARLLDPQGEYFKDKVIS 318

Query: 14  RED 6
           R+D
Sbjct: 319 RDD 321


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = -3

Query: 188 LKHLNTATKLRPSVRSFLKQANEMFELHIYTMGGIDYARDMVNLLDPGKLYFRNKVYSRE 9
           L+H+N  TKLRP VR FLK+A+EMFE++IYTMG   YA +M  LLDP   YF  KV SR+
Sbjct: 184 LEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRD 243

Query: 8   D 6
           D
Sbjct: 244 D 244


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = -3

Query: 188 LKHLNTATKLRPSVRSFLKQANEMFELHIYTMGGIDYARDMVNLLDPGKLYFRNKVYSRE 9
           L+H+N  TKLRP VR FLK+A+EMFE++IYTMG   YA +M  LLDP   YF  KV SR+
Sbjct: 170 LEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRD 229

Query: 8   D 6
           D
Sbjct: 230 D 230


>ref|XP_002324546.1| predicted protein [Populus trichocarpa] gi|222865980|gb|EEF03111.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/63 (55%), Positives = 47/63 (74%)
 Frame = -3

Query: 194 YILKHLNTATKLRPSVRSFLKQANEMFELHIYTMGGIDYARDMVNLLDPGKLYFRNKVYS 15
           ++L  +   TKLRP VR+FLK+A++MFE++IYTMG   YA +M  LLDPG+ YF  KV S
Sbjct: 55  FMLSSMQMMTKLRPFVRTFLKEASQMFEMYIYTMGDRAYALEMAKLLDPGREYFNAKVIS 114

Query: 14  RED 6
           R+D
Sbjct: 115 RDD 117


>ref|XP_002324547.1| predicted protein [Populus trichocarpa] gi|222865981|gb|EEF03112.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -3

Query: 191 ILKHLNTATKLRPSVRSFLKQANEMFELHIYTMGGIDYARDMVNLLDPGKLYFRNKVYSR 12
           +L  +   TKLRP VR+FLK+A++MFE++IYTMG   YA +M  LLDPG+ YF  KV SR
Sbjct: 1   MLSSMQMMTKLRPFVRTFLKEASQMFEMYIYTMGDRAYALEMAKLLDPGREYFNAKVISR 60

Query: 11  ED 6
           +D
Sbjct: 61  DD 62