BLASTX nr result

ID: Cimicifuga21_contig00001994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001994
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...   274   6e-72
ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-70
ref|XP_003533461.1| PREDICTED: cullin-1-like [Glycine max]            269   3e-70
ref|XP_003546376.1| PREDICTED: cullin-1-like [Glycine max]            269   3e-70
ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifer...   269   3e-70

>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
           Cullin-1, putative [Ricinus communis]
          Length = 744

 Score =  274 bits (701), Expect = 6e-72
 Identities = 129/187 (68%), Positives = 155/187 (82%), Gaps = 3/187 (1%)
 Frame = -3

Query: 554 KMKNILEGLPEEHFRAKEYMHLYTTIFNMCTQRPPHDHSEQLYDKYRQGVESYTLLTILP 375
           K+KNILEGLPE  F +++YM LYTTI+NMCTQ+PPHD+S+QLYDKYR+  E Y   T+LP
Sbjct: 24  KLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSTVLP 83

Query: 374 SLREKHDEFLLREFVRRWKDHQVMVRWLSRIFHYLDRFFLVLSSLPSLTEVGFISFRDLV 195
           SLREKHDEF+LRE V+RW +H+VMVRWLSR FHYLDR+F+   SLP L EVG   FRDLV
Sbjct: 84  SLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLV 143

Query: 194 YQDVSVKVRDVVIGLIEQEREGGQIDRGLLKNVLDIFVDMG---MDYYKNDFEVAVIDNT 24
           YQ+++ KVRD VI LI+QEREG QIDR LLKNVLDIFV++G   MDYY+NDFEVA++ +T
Sbjct: 144 YQELNAKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFEVAMLKDT 203

Query: 23  VGYYSRK 3
             YYSRK
Sbjct: 204 GSYYSRK 210


>ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|222871568|gb|EEF08699.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score =  270 bits (689), Expect = 1e-70
 Identities = 127/187 (67%), Positives = 153/187 (81%), Gaps = 3/187 (1%)
 Frame = -3

Query: 554 KMKNILEGLPEEHFRAKEYMHLYTTIFNMCTQRPPHDHSEQLYDKYRQGVESYTLLTILP 375
           K+KNILEGL E  F +++YM LYTTI+NMCTQ+PPHD+S+QLYDKYR+  E Y   T+LP
Sbjct: 24  KLKNILEGLQEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSTVLP 83

Query: 374 SLREKHDEFLLREFVRRWKDHQVMVRWLSRIFHYLDRFFLVLSSLPSLTEVGFISFRDLV 195
           SLREKHDEF+LRE V+RW +H+VMVRWLSR FHYLDR+F+   SLP L EVG   FRDLV
Sbjct: 84  SLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLV 143

Query: 194 YQDVSVKVRDVVIGLIEQEREGGQIDRGLLKNVLDIFVDMG---MDYYKNDFEVAVIDNT 24
           YQ+++ KVRD VI LI+QEREG QIDR LLKNVLDIFV++G   MDYY+NDFE A++ +T
Sbjct: 144 YQELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFEAAMLKDT 203

Query: 23  VGYYSRK 3
             YYSRK
Sbjct: 204 AAYYSRK 210


>ref|XP_003533461.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 744

 Score =  269 bits (687), Expect = 3e-70
 Identities = 125/187 (66%), Positives = 155/187 (82%), Gaps = 3/187 (1%)
 Frame = -3

Query: 554 KMKNILEGLPEEHFRAKEYMHLYTTIFNMCTQRPPHDHSEQLYDKYRQGVESYTLLTILP 375
           K+KNILEGLPE  F +++YM LYTTI+NMCTQ+PPHD+S+QLYDKYR+  E Y + T+LP
Sbjct: 24  KLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIVSTVLP 83

Query: 374 SLREKHDEFLLREFVRRWKDHQVMVRWLSRIFHYLDRFFLVLSSLPSLTEVGFISFRDLV 195
           SLREKHDEF+LRE V+RW +H++MVRWLSR FHYLDR+F+   SLP L EVG   FRDLV
Sbjct: 84  SLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLV 143

Query: 194 YQDVSVKVRDVVIGLIEQEREGGQIDRGLLKNVLDIFVDMG---MDYYKNDFEVAVIDNT 24
           Y++++ KVRD VI LI+QEREG QIDR LLKNVLDIFV++G   MD+Y+NDFE A++ +T
Sbjct: 144 YKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFEAAMLKDT 203

Query: 23  VGYYSRK 3
             YYSRK
Sbjct: 204 SAYYSRK 210


>ref|XP_003546376.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 744

 Score =  269 bits (687), Expect = 3e-70
 Identities = 125/187 (66%), Positives = 155/187 (82%), Gaps = 3/187 (1%)
 Frame = -3

Query: 554 KMKNILEGLPEEHFRAKEYMHLYTTIFNMCTQRPPHDHSEQLYDKYRQGVESYTLLTILP 375
           K+KNILEGLPE  F +++YM LYTTI+NMCTQ+PPHD+S+QLYDKYR+  E Y + T+LP
Sbjct: 24  KLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIVSTVLP 83

Query: 374 SLREKHDEFLLREFVRRWKDHQVMVRWLSRIFHYLDRFFLVLSSLPSLTEVGFISFRDLV 195
           SLREKHDEF+LRE V+RW +H++MVRWLSR FHYLDR+F+   SLP L EVG   FRDLV
Sbjct: 84  SLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLV 143

Query: 194 YQDVSVKVRDVVIGLIEQEREGGQIDRGLLKNVLDIFVDMG---MDYYKNDFEVAVIDNT 24
           Y++++ KVRD VI LI+QEREG QIDR LLKNVLDIFV++G   MD+Y+NDFE A++ +T
Sbjct: 144 YKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFEAAMLKDT 203

Query: 23  VGYYSRK 3
             YYSRK
Sbjct: 204 SAYYSRK 210


>ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifera]
           gi|297736859|emb|CBI26060.3| unnamed protein product
           [Vitis vinifera]
          Length = 744

 Score =  269 bits (687), Expect = 3e-70
 Identities = 126/187 (67%), Positives = 153/187 (81%), Gaps = 3/187 (1%)
 Frame = -3

Query: 554 KMKNILEGLPEEHFRAKEYMHLYTTIFNMCTQRPPHDHSEQLYDKYRQGVESYTLLTILP 375
           K+KNILEGLPE  F +++YM LYTTI+NMCTQ+PPHD+S+QLYDKYR+  E Y   T+LP
Sbjct: 24  KLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITTTVLP 83

Query: 374 SLREKHDEFLLREFVRRWKDHQVMVRWLSRIFHYLDRFFLVLSSLPSLTEVGFISFRDLV 195
           SLREKHDEF+LRE V+RW +H+VMVRWLSR FHYLDR+F+   SLP+L EVG   FRDLV
Sbjct: 84  SLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLV 143

Query: 194 YQDVSVKVRDVVIGLIEQEREGGQIDRGLLKNVLDIFVDMG---MDYYKNDFEVAVIDNT 24
           YQ++  KVRD VI LI+QEREG QIDR LLKNVLDIFV++G   M+ Y+NDFE A++ +T
Sbjct: 144 YQELYSKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMEQYENDFEAAMLKDT 203

Query: 23  VGYYSRK 3
             YYSRK
Sbjct: 204 AAYYSRK 210


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