BLASTX nr result

ID: Cimicifuga21_contig00001993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001993
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis ...   437   e-120
ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform...   434   e-119
sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; ...   434   e-119
ref|XP_002524357.1| 60S ribosomal protein L10, putative [Ricinus...   432   e-119
gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]        432   e-119

>ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis vinifera]
           gi|297745742|emb|CBI15798.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  437 bits (1125), Expect = e-120
 Identities = 205/218 (94%), Positives = 214/218 (98%)
 Frame = -2

Query: 929 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 750
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 749 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 570
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 569 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 390
           KP GTCARVSIGQVLLSVRCKD N  HAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 180

Query: 389 YVRWKADNRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 276
           Y++WK++NRI+PDGVNAKLLGCHGPLANRQPG+AF++A
Sbjct: 181 YIKWKSENRILPDGVNAKLLGCHGPLANRQPGKAFINA 218


>ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform 2 [Vitis vinifera]
           gi|225425354|ref|XP_002275270.1| PREDICTED: 60S
           ribosomal protein L10 isoform 1 [Vitis vinifera]
          Length = 224

 Score =  434 bits (1117), Expect = e-119
 Identities = 206/216 (95%), Positives = 210/216 (97%)
 Frame = -2

Query: 929 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 750
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 749 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 570
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 569 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 390
           KP GTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 389 YVRWKADNRIMPDGVNAKLLGCHGPLANRQPGRAFL 282
           YV+WK +NRIMPDGVNAKLLGCHGPLA RQPGRAFL
Sbjct: 181 YVKWKQENRIMPDGVNAKLLGCHGPLAQRQPGRAFL 216


>sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; AltName: Full=QM protein
           homolog gi|5917743|gb|AAD56018.1|AF180758_1 60S
           ribosomal protein L10 [Vitis riparia]
          Length = 220

 Score =  434 bits (1117), Expect = e-119
 Identities = 204/218 (93%), Positives = 212/218 (97%)
 Frame = -2

Query: 929 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 750
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 749 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 570
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 569 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 390
           KP GTCARVSIGQVLLSVRCKD N  HAQEALRRAKFKFP RQKIIVSRKWGFTKFNRTD
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 389 YVRWKADNRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 276
           Y++WK+ NRI+PDGVNAKLLGCHGPLANRQPG+AF++A
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINA 218


>ref|XP_002524357.1| 60S ribosomal protein L10, putative [Ricinus communis]
           gi|223536448|gb|EEF38097.1| 60S ribosomal protein L10,
           putative [Ricinus communis]
          Length = 220

 Score =  432 bits (1112), Expect = e-119
 Identities = 206/219 (94%), Positives = 212/219 (96%)
 Frame = -2

Query: 929 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 750
           MGRRPARCYRQIKNKPYPKSRYCRGVPD KIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDSKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 749 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 570
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 569 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 390
           KP GTCARV+IGQVLLSVRCKDNN  HAQEALRRAKFKFPGRQKIIVSRKWGFTKFNR D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRND 180

Query: 389 YVRWKADNRIMPDGVNAKLLGCHGPLANRQPGRAFLDAT 273
           YV+ K++NRIMPDGVNAKLLGCHGPLANRQPGRAFLDA+
Sbjct: 181 YVKLKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLDAS 219


>gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]
          Length = 220

 Score =  432 bits (1111), Expect = e-119
 Identities = 206/220 (93%), Positives = 214/220 (97%)
 Frame = -2

Query: 929 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 750
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 749 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 570
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 569 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 390
           KP GTCARV+IGQVLLSVRCKD+N  HAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 180

Query: 389 YVRWKADNRIMPDGVNAKLLGCHGPLANRQPGRAFLDATA 270
           YV+ KA+NRI+PDGVNAKLLGCHGPLA RQPGRAFL+A+A
Sbjct: 181 YVKLKAENRIVPDGVNAKLLGCHGPLAERQPGRAFLNASA 220


Top