BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001966
         (1726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform ...   345   3e-92
ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatul...   326   1e-86
ref|XP_002530059.1| conserved hypothetical protein [Ricinus comm...   317   6e-84
ref|XP_003533290.1| PREDICTED: DNA-binding protein RHL1-like [Gl...   310   8e-82
ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Gl...   302   2e-79

>ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform 1 [Vitis vinifera]
            gi|359489730|ref|XP_003633969.1| PREDICTED: DNA-binding
            protein RHL1 isoform 2 [Vitis vinifera]
          Length = 449

 Score =  345 bits (884), Expect = 3e-92
 Identities = 185/347 (53%), Positives = 232/347 (66%), Gaps = 15/347 (4%)
 Frame = +3

Query: 117  MVKASKKIEND---------DERTRLKKLAISHNILSQTPCNPSSTLYPSKTVLKHQGKD 269
            MV+ SKK EN          +ER R KKLA S N+LS TP    S L PSKTV+KH GKD
Sbjct: 1    MVRVSKKNENGGVSELNPEAEERKRRKKLAFSKNLLSDTPSKAFSALSPSKTVIKHHGKD 60

Query: 270  IVKKSQRKNRFLFSFPGLLGPISGGKIGELKDLGTKNPILYLDFPQGRVKLFGTIVHPKN 449
            I+KKSQRKNRFLFSFPGLL PI+GGKIGELKDLGTKNPILYLDFPQG++KLFGTIV+PKN
Sbjct: 61   ILKKSQRKNRFLFSFPGLLAPIAGGKIGELKDLGTKNPILYLDFPQGQMKLFGTIVYPKN 120

Query: 450  RYLTLQFSKGGKNVMCEDHFDNMVVFSDAWWIGQKDENPEEIQLDFPMNMSKGKHTENDF 629
            RYLTL FS+GGKNVMCED+FDNM+VFSDAWWIG+K+ENPEE +L+FP  +S+G+  E DF
Sbjct: 121  RYLTLHFSRGGKNVMCEDYFDNMIVFSDAWWIGRKEENPEEARLEFPKELSEGQSVEYDF 180

Query: 630  KGGAGAGATCEQKPGPNKPRKEYVEPQSPSTDI------EDVSEDISSLTGKNKDLMELT 791
            KGGAG  +  + K G NKP  +YVEPQSP  ++      ED  +D+  +T K+   +E+T
Sbjct: 181  KGGAGMAS--DSKQGVNKPEMKYVEPQSPKPELEDDLSGEDSLKDVVEMTPKD---VEVT 235

Query: 792  PVRQSARTVGKKFKFTEASSGDNSAESESDPSEVMKEGSEENLDDMSEDPSLVSHAIDSV 971
            PVR S RT GK F F EASSGD+S E++ + S+  +       +  +ED    + A   +
Sbjct: 236  PVRHSQRTAGKTFNFAEASSGDDSVENDGNISDGQENSGSATPESGNEDAEARTGATTQI 295

Query: 972  KVATKTNLLDQKQQRXXXXXXXXXXXXXXXXXXQATISTLFEKAKRK 1112
            + +       +K+                    QATISTLF+K + +
Sbjct: 296  QESAGAATKSRKR------------------LSQATISTLFKKVEEQ 324


>ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatula]
            gi|355495168|gb|AES76371.1| DNA-binding protein RHL1
            [Medicago truncatula]
          Length = 435

 Score =  326 bits (836), Expect = 1e-86
 Identities = 185/356 (51%), Positives = 227/356 (63%), Gaps = 23/356 (6%)
 Frame = +3

Query: 114  AMVKASKKIENDDE----------RTRLKKLAISHNILSQTPCNPSSTLYPSKTVLKHQG 263
            A  K  KK  +D+E          R RLK LA S+N+LS+T    S  L PS  V KH G
Sbjct: 2    ARPKTKKKTRSDEEADATNPETIERKRLKSLAFSNNVLSETKARSSIHLNPSSIVAKHHG 61

Query: 264  KDIVKKSQRKN-RFLFSFPGLLGPISGGKIGELKDLGTKNPILYLDFPQGRVKLFGTIVH 440
            KDI+KKSQRK+ R+LFSFPGL  PI GGKIG+LKDLGTKNPILYLDFPQGR+KLFGTI++
Sbjct: 62   KDIIKKSQRKSSRYLFSFPGLFAPIGGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTILY 121

Query: 441  PKNRYLTLQFSKGGKNVMCEDHFDNMVVFSDAWWIGQKDENPEEIQLDFPMNMSKGKHTE 620
            PKNRYLTLQFSKGGK+VMCED+FDNM+VFSDAWWIG KDENPEE +L+FP  + +GK TE
Sbjct: 122  PKNRYLTLQFSKGGKSVMCEDYFDNMIVFSDAWWIGTKDENPEEAKLEFPKELYEGKQTE 181

Query: 621  NDFKG----GAGAGATCEQKPGPNKPRKEYVEPQSPSTDIEDVSEDISSLTGKNKDLMEL 788
            +DFKG    GAGAGA      G +K + +  EP+SP T +E   ED+S    + KD  EL
Sbjct: 182  HDFKGGAGAGAGAGAASVVNHGVSKTKIKRPEPESPETPLE---EDLSDSEIELKDTTEL 238

Query: 789  TPVRQSARTVGKKFKFTEASSGDNSAESESDPSEVMKEGSEENLDDMSEDPSLVSHAIDS 968
             PVRQSARTV K +KF E SSGD+S +S  D SE  ++  E + D      S +   I +
Sbjct: 239  VPVRQSARTVKKSYKFAEISSGDDSGKSSPDLSEHEEKAVEVDTDANDHTSSNILSVISA 298

Query: 969  VKVATKTNLLD--------QKQQRXXXXXXXXXXXXXXXXXXQATISTLFEKAKRK 1112
              V  +T ++D        + Q                    QATIS+LF+K + K
Sbjct: 299  SPVQKETAVIDIDDEDDAPKDQLPVENKEPASVSKAKKGLLVQATISSLFKKVEVK 354


>ref|XP_002530059.1| conserved hypothetical protein [Ricinus communis]
            gi|223530436|gb|EEF32321.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 448

 Score =  317 bits (812), Expect = 6e-84
 Identities = 177/341 (51%), Positives = 220/341 (64%), Gaps = 21/341 (6%)
 Frame = +3

Query: 153  ERTRLKKLAISHNILSQTPCNPSSTLYPSKTVLKHQGKDIVKKSQRKNRFLFSFPGLLGP 332
            ER RLKKL+ S++ILS TP +  S L PSKTVLKH GKDI +K QRKNRFLFSFPGLL P
Sbjct: 21   ERKRLKKLSFSNHILSDTPIDAQSPLPPSKTVLKHHGKDITRKCQRKNRFLFSFPGLLAP 80

Query: 333  I-SGGKIGELKDLGTKNPILYLDFPQGRVKLFGTIVHPKNRYLTLQFSKGGKNVMCEDHF 509
            I SGGKIG+LK+LGTKNPILYL FPQG++KLFGTIV+PKNRYL+LQFS+GGKNVMCED+F
Sbjct: 81   IASGGKIGDLKNLGTKNPILYLHFPQGQLKLFGTIVYPKNRYLSLQFSRGGKNVMCEDYF 140

Query: 510  DNMVVFSDAWWIGQKDENPEEIQLDFPMNMSKGKHTENDFKGGAGAGATCEQKPGPNKPR 689
            D M+VFS+AWWIG K+ENPEE +LDFP    +G+  E DFKGGAGA +    K   ++  
Sbjct: 141  DTMIVFSEAWWIGTKEENPEEARLDFPKQFLEGREVEYDFKGGAGAASALINKQVAHRSG 200

Query: 690  KEYVEPQSPSTDIE-DVSEDISSLTGKNKDLMELTPVRQSARTVGKKFKFTEASSGDNSA 866
             +YVE +SP T++E D+ ++ S+L    KDL E TPVR S RT GK FKF + SS +++ 
Sbjct: 201  MKYVEEESPDTELENDLLDEKSNL----KDLKETTPVRHSERTTGKTFKFADVSSEEDAV 256

Query: 867  ESESDPSEVMKEGSEEN-----------------LDDMSEDPSLVSH--AIDSVKVATKT 989
            ES     +V +EG EE                  LD   ED +  +H  + +     ++T
Sbjct: 257  ESVPADIDVKEEGEEEKKAGKELEFKWSMLGLPFLDFDDEDATQGNHFSSQNHASAMSET 316

Query: 990  NLLDQKQQRXXXXXXXXXXXXXXXXXXQATISTLFEKAKRK 1112
            N     +                    QATISTLF KA  K
Sbjct: 317  NSRKLSESAVIATTSKEDLHSNRGSLVQATISTLFNKAHGK 357


>ref|XP_003533290.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 421

 Score =  310 bits (794), Expect = 8e-82
 Identities = 161/266 (60%), Positives = 191/266 (71%), Gaps = 10/266 (3%)
 Frame = +3

Query: 123 KASKKIENDD---------ERTRLKKLAISHNILSQTPCNPSSTLYPSKTVLKHQGKDIV 275
           KA KK E +D         ER RLK LAIS+ ILS+TP   S  L PS  V KH GKDI+
Sbjct: 5   KAKKKEEGEDTDVANPETLERKRLKSLAISNKILSETPARSSVHLNPSSVVAKHHGKDII 64

Query: 276 KKSQRKN-RFLFSFPGLLGPISGGKIGELKDLGTKNPILYLDFPQGRVKLFGTIVHPKNR 452
           KKSQRK+ R+LFSFPGL+ PI+GGKIG+LKDLGTKNP+LYLDFPQG++KLFGTIV+PKNR
Sbjct: 65  KKSQRKSCRYLFSFPGLIAPIAGGKIGDLKDLGTKNPVLYLDFPQGQMKLFGTIVYPKNR 124

Query: 453 YLTLQFSKGGKNVMCEDHFDNMVVFSDAWWIGQKDENPEEIQLDFPMNMSKGKHTENDFK 632
           YLTLQF KGGK+VMCED+FDNM+VFSDAWWIG+KDENPEE +L+FP  + +G   E DFK
Sbjct: 125 YLTLQFPKGGKSVMCEDYFDNMIVFSDAWWIGRKDENPEESKLEFPNELYEGHQAEYDFK 184

Query: 633 GGAGAGATCEQKPGPNKPRKEYVEPQSPSTDIEDVSEDISSLTGKNKDLMELTPVRQSAR 812
           GGAGAGA      G  +   + VE +SP T  ED   D+S      KD  EL PVR S R
Sbjct: 185 GGAGAGAASVVNQGVPRTNIQRVEQESPKTPTED---DLSDNEINLKDTKELVPVRHSTR 241

Query: 813 TVGKKFKFTEASSGDNSAESESDPSE 890
           T  K +KF E SSGD+S E+  + S+
Sbjct: 242 TAKKSYKFAEISSGDDSGENSPELSD 267


>ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 415

 Score =  302 bits (774), Expect = 2e-79
 Identities = 176/371 (47%), Positives = 218/371 (58%), Gaps = 36/371 (9%)
 Frame = +3

Query: 123  KASKKIENDDE----------RTRLKKLAISHNILSQTPCNPSSTLYPSKTVLKHQGKDI 272
            KA KK E ++E          R RLK LAISHNILS+TP   S  L PS  V KH GKDI
Sbjct: 6    KAKKKEEGEEEANLTNPETIERKRLKSLAISHNILSETPARSSVQLNPSSVVAKHHGKDI 65

Query: 273  VKKSQRKN-RFLFSFPGLLGPISGGKIGELKDLGTKNPILYLDFPQGRVKLFGTIVHPKN 449
            +KKSQRK+ R+LFSFPGL+ PI+GGKIG+LKDLGTKNP+LYLDFPQG++KLFGTIV+PKN
Sbjct: 66   IKKSQRKSSRYLFSFPGLIAPIAGGKIGDLKDLGTKNPVLYLDFPQGQMKLFGTIVYPKN 125

Query: 450  RYLTLQFSKGGKNVMCEDHFDNMVVFSDAWWIGQKDENPEEIQLDFPMNMSKGKHTENDF 629
            RYLTLQF KGGK+VMCED+FDNM+VFSDAWWIG+K+ENPEE +L+FP  + +G  +E DF
Sbjct: 126  RYLTLQFPKGGKSVMCEDYFDNMIVFSDAWWIGRKEENPEEAKLEFPKELYEGHQSEYDF 185

Query: 630  KGGAGAGATCEQKPGPNKPRKEYVEPQSPSTDIEDVSEDISSLTGKNKDLMELTPVRQSA 809
            KGGAGAGA      G  + + + VE +SP T  ED   D+S      +D  EL PVR   
Sbjct: 186  KGGAGAGAASVVNQGVPRTKIQRVEQESPKTPTED---DLSDSEINLEDTKELVPVR--- 239

Query: 810  RTVGKKFKFTEASSGDNSAESESDPSE-------------------------VMKEGSEE 914
                    F E SSGD+S E+  D S+                         + K+    
Sbjct: 240  --------FAEISSGDDSGENSPDLSDHEEKVAEVDTAVNDHNSSNILIVSLIQKKTVVF 291

Query: 915  NLDDMSEDPSLVSHAIDSVKVATKTNLLDQKQQRXXXXXXXXXXXXXXXXXXQATISTLF 1094
            +LDD  ED + V         +   +   +  Q                   QATISTLF
Sbjct: 292  DLDD--EDDAPVDQPAKKNNESASRSKCKEVSQSASASASTEVKSSNRGSLVQATISTLF 349

Query: 1095 EKAKRKDVGGR 1127
            +K + KD G +
Sbjct: 350  KKVEEKDEGSK 360