BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001958
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...   522   e-145
emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]   521   e-145
ref|XP_002517473.1| structure-specific recognition protein, puta...   514   e-143
ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   512   e-142
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   512   e-142

>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
            gi|296082859|emb|CBI22160.3| unnamed protein product
            [Vitis vinifera]
          Length = 644

 Score =  522 bits (1344), Expect = e-145
 Identities = 249/313 (79%), Positives = 284/313 (90%)
 Frame = -2

Query: 1581 MADGHLFNNILLGGRGGTNPGAIRVHSGGIAWKKQGGGKTVEVDKSEIVGITWTRVPRSY 1402
            M++GHLFNNI LGGRGGTNPG +RVH GGI WKKQGGGK VEVDKS+IVG+TW +VPR+ 
Sbjct: 1    MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60

Query: 1401 QLGVRIKDGLFYNFTGFRDQDVSSLTIFAQNNFGKTPEKKQLSISGHNWGEVDLTGNMLT 1222
            QLGVR+KDGL+Y FTGFR+QDV++LT F Q++ G  PE+KQLS+SG NWGEVDL GNMLT
Sbjct: 61   QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGLNPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 1221 FLVGLKQAFEVSLADVSRTQLQGKNKVMLEFHMDDTTGSNEKDSLMEIRFHIPNSNAQYV 1042
            FLVG KQAFEVSLADVS+TQ+QGKN V+LEFH+DDTTG+NEKDSLMEI FHIPNSN Q+V
Sbjct: 121  FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 1041 GDETRPPAQVFCDKLMSMADVGASGEDAVATFEGIAVLTPRGRYNVELHLSFFRLQGQAM 862
            GDE RPPAQVF DK+MSMADVGA GE+AV TFEGIA+LTPRGRY+VELHLSF RLQGQA 
Sbjct: 181  GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 861  DFKIQYSSIARLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQLKTDFVVESTLSMN 682
            DFKIQYSS+ RLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV+Q +TD+VV+S LS++
Sbjct: 241  DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS 300

Query: 681  EDLLNRKYKDRLE 643
            E+LLN KYKD+LE
Sbjct: 301  EELLNSKYKDKLE 313



 Score =  216 bits (549), Expect = 2e-53
 Identities = 110/152 (72%), Positives = 125/152 (82%), Gaps = 2/152 (1%)
 Frame = -1

Query: 451 PGKFRSRQNGYAVKSSLKTEDGVLYPLEKGFFFLPKPPTLILNEEIDCLEFERLSAGGTN 272
           PGKFRS Q+GYAVKSSLK EDGVLYPLEK FFFLPKPPTLIL+EEID +EFER +AGG+N
Sbjct: 339 PGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 398

Query: 271 MHYFDLTVRLKNEQEHVFKNIQKNEYDNLFNFIRAKGLKILNLGVGAPTVDGVTAALQXX 92
           MHYFDL +RLK EQEH+F+NIQ+NEY NLF+FI  KGLKI+NLG    T DGV A LQ  
Sbjct: 399 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLG-DVQTADGVAAVLQND 457

Query: 91  XXDAVDPHLERLKHAT--VDSDEEDEDFVAEK 2
             DAVDPHLER+K+     +SDEEDEDFV +K
Sbjct: 458 DDDAVDPHLERIKNEAGGDESDEEDEDFVLDK 489


>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
          Length = 644

 Score =  521 bits (1343), Expect = e-145
 Identities = 249/313 (79%), Positives = 284/313 (90%)
 Frame = -2

Query: 1581 MADGHLFNNILLGGRGGTNPGAIRVHSGGIAWKKQGGGKTVEVDKSEIVGITWTRVPRSY 1402
            M++GHLFNNI LGGRGGTNPG +RVH GGI WKKQGGGK VEVDKS+IVG+TW +VPR+ 
Sbjct: 1    MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60

Query: 1401 QLGVRIKDGLFYNFTGFRDQDVSSLTIFAQNNFGKTPEKKQLSISGHNWGEVDLTGNMLT 1222
            QLGVR+KDGL+Y FTGFR+QDV++LT F Q++ G  PE+KQLS+SG NWGEVDL GNMLT
Sbjct: 61   QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGJNPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 1221 FLVGLKQAFEVSLADVSRTQLQGKNKVMLEFHMDDTTGSNEKDSLMEIRFHIPNSNAQYV 1042
            FLVG KQAFEVSLADVS+TQ+QGKN V+LEFH+DDTTG+NEKDSLMEI FHIPNSN Q+V
Sbjct: 121  FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 1041 GDETRPPAQVFCDKLMSMADVGASGEDAVATFEGIAVLTPRGRYNVELHLSFFRLQGQAM 862
            GDE RPPAQVF DK+MSMADVGA GE+AV TFEGIA+LTPRGRY+VELHLSF RLQGQA 
Sbjct: 181  GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 861  DFKIQYSSIARLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQLKTDFVVESTLSMN 682
            DFKIQYSS+ RLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV+Q +TD+VV+S LS++
Sbjct: 241  DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS 300

Query: 681  EDLLNRKYKDRLE 643
            E+LLN KYKD+LE
Sbjct: 301  EELLNXKYKDKLE 313



 Score =  216 bits (549), Expect = 2e-53
 Identities = 110/152 (72%), Positives = 125/152 (82%), Gaps = 2/152 (1%)
 Frame = -1

Query: 451 PGKFRSRQNGYAVKSSLKTEDGVLYPLEKGFFFLPKPPTLILNEEIDCLEFERLSAGGTN 272
           PGKFRS Q+GYAVKSSLK EDGVLYPLEK FFFLPKPPTLIL+EEID +EFER +AGG+N
Sbjct: 339 PGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 398

Query: 271 MHYFDLTVRLKNEQEHVFKNIQKNEYDNLFNFIRAKGLKILNLGVGAPTVDGVTAALQXX 92
           MHYFDL +RLK EQEH+F+NIQ+NEY NLF+FI  KGLKI+NLG    T DGV A LQ  
Sbjct: 399 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLG-DVQTADGVAAVLQND 457

Query: 91  XXDAVDPHLERLKHAT--VDSDEEDEDFVAEK 2
             DAVDPHLER+K+     +SDEEDEDFV +K
Sbjct: 458 DDDAVDPHLERIKNEAGGDESDEEDEDFVLDK 489


>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
            gi|223543484|gb|EEF45015.1| structure-specific
            recognition protein, putative [Ricinus communis]
          Length = 640

 Score =  514 bits (1323), Expect = e-143
 Identities = 246/313 (78%), Positives = 279/313 (89%)
 Frame = -2

Query: 1581 MADGHLFNNILLGGRGGTNPGAIRVHSGGIAWKKQGGGKTVEVDKSEIVGITWTRVPRSY 1402
            M DGHLFNNI LGGRGGTNPG +++HSGGI WKKQGGGK VEVDK++I G+TW +VPR+ 
Sbjct: 1    MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGLTWMKVPRTN 60

Query: 1401 QLGVRIKDGLFYNFTGFRDQDVSSLTIFAQNNFGKTPEKKQLSISGHNWGEVDLTGNMLT 1222
            QLGVRIKDGLFY FTGFRDQD ++LT F Q+N G T E+KQLS+SG NWGEVDL GNMLT
Sbjct: 61   QLGVRIKDGLFYKFTGFRDQDHANLTSFFQSNCGITLEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 1221 FLVGLKQAFEVSLADVSRTQLQGKNKVMLEFHMDDTTGSNEKDSLMEIRFHIPNSNAQYV 1042
            FLVG KQAFEVSLADVS+TQ+QGKN V+LEFH+DDTTG+NEKDSLMEI FHIP++N Q+V
Sbjct: 121  FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNTQFV 180

Query: 1041 GDETRPPAQVFCDKLMSMADVGASGEDAVATFEGIAVLTPRGRYNVELHLSFFRLQGQAM 862
            GDE  PPAQVF DK+MSMADV   GE+AV TF+G+A+LTPRGRY+VELHLSF RLQGQA 
Sbjct: 181  GDENHPPAQVFRDKIMSMADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 861  DFKIQYSSIARLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQLKTDFVVESTLSMN 682
            DFKIQYSS+ RLFLLPKSNQPHTFV+VTLDPPIRKGQTLYPHIVLQ  TDFVV+STL+MN
Sbjct: 241  DFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFDTDFVVQSTLTMN 300

Query: 681  EDLLNRKYKDRLE 643
            EDLL+ KYKD+LE
Sbjct: 301  EDLLSTKYKDKLE 313



 Score =  210 bits (535), Expect = 8e-52
 Identities = 107/151 (70%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451 PGKFRSRQNGYAVKSSLKTEDGVLYPLEKGFFFLPKPPTLILNEEIDCLEFERLSAGGTN 272
           PGKFRS Q+GYAVKSSLK EDG+LYPLEK FFFLPKPPTLIL+EEID +EFER + G +N
Sbjct: 339 PGKFRSCQDGYAVKSSLKAEDGLLYPLEKSFFFLPKPPTLILHEEIDYVEFERHATGSSN 398

Query: 271 MHYFDLTVRLKNEQEHVFKNIQKNEYDNLFNFIRAKGLKILNLGVGAPTVDGVTAALQXX 92
           MHYFDL +RLK EQEH+F+NIQ+NEY NLF+FI  KGLKI+NLG    T +GV A LQ  
Sbjct: 399 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLG-DMKTTNGVAAVLQND 457

Query: 91  XXDAVDPHLERLKHATVD-SDEEDEDFVAEK 2
             DAVDPHLER+K+   D SDEED DFVA+K
Sbjct: 458 DDDAVDPHLERIKNEAGDESDEEDSDFVADK 488


>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  512 bits (1318), Expect = e-142
 Identities = 242/313 (77%), Positives = 279/313 (89%)
 Frame = -2

Query: 1581 MADGHLFNNILLGGRGGTNPGAIRVHSGGIAWKKQGGGKTVEVDKSEIVGITWTRVPRSY 1402
            M DGHLFNNI LGGRGGTNPG I+++ GGI WK+QGGGK +EVDKS+I+G+TW +VPRS 
Sbjct: 1    MTDGHLFNNITLGGRGGTNPGQIKIYPGGIVWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60

Query: 1401 QLGVRIKDGLFYNFTGFRDQDVSSLTIFAQNNFGKTPEKKQLSISGHNWGEVDLTGNMLT 1222
            QLGV+IKDGL+Y FTGFRDQDV +LT F QN  G + E+KQLS+SG NWGEVDL GNML 
Sbjct: 61   QLGVQIKDGLYYKFTGFRDQDVVTLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120

Query: 1221 FLVGLKQAFEVSLADVSRTQLQGKNKVMLEFHMDDTTGSNEKDSLMEIRFHIPNSNAQYV 1042
            F+VG KQAFEVSLADVS+TQLQGKN V+LEFH+DDTTG+NEKDSLMEI FHIPNSN Q+V
Sbjct: 121  FMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 1041 GDETRPPAQVFCDKLMSMADVGASGEDAVATFEGIAVLTPRGRYNVELHLSFFRLQGQAM 862
            GDE RPPAQVF DK+MSMADVGA GEDA+ TFEGIA+LTPRGRY+VELH+SF RLQGQA 
Sbjct: 181  GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 240

Query: 861  DFKIQYSSIARLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQLKTDFVVESTLSMN 682
            DFKIQYSS+ RLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+Q +TD+VVES L++N
Sbjct: 241  DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAIN 300

Query: 681  EDLLNRKYKDRLE 643
            EDL N K+KD+LE
Sbjct: 301  EDLYNTKFKDKLE 313



 Score =  212 bits (539), Expect = 3e-52
 Identities = 106/152 (69%), Positives = 126/152 (82%), Gaps = 2/152 (1%)
 Frame = -1

Query: 451 PGKFRSRQNGYAVKSSLKTEDGVLYPLEKGFFFLPKPPTLILNEEIDCLEFERLSAGGTN 272
           PGKFRS Q+GYAVKSSLK EDG+LYPLEK FFFLPKPPTLIL+EEID +EFER +AGG+N
Sbjct: 339 PGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 398

Query: 271 MHYFDLTVRLKNEQEHVFKNIQKNEYDNLFNFIRAKGLKILNLGVGAPTVDGVTAALQXX 92
           MHYFDL +RLK+EQEH+F+NIQ+NEY NL+ FI +KGLKI+NLG   PTV G+   L+  
Sbjct: 399 MHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKIMNLGDAQPTV-GIKKVLEND 457

Query: 91  XXDAVDPHLERLKH--ATVDSDEEDEDFVAEK 2
             DAVDPHLER+K+     +SDEED DFVA+K
Sbjct: 458 DDDAVDPHLERIKNEAGEDESDEEDSDFVADK 489


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  512 bits (1318), Expect = e-142
 Identities = 243/313 (77%), Positives = 278/313 (88%)
 Frame = -2

Query: 1581 MADGHLFNNILLGGRGGTNPGAIRVHSGGIAWKKQGGGKTVEVDKSEIVGITWTRVPRSY 1402
            M DGHLFNNI LGGRGGTNPG I+++ GGI WK+QGGGK +EVDKS+I+G+TW +VPRS 
Sbjct: 1    MTDGHLFNNITLGGRGGTNPGQIKIYPGGIIWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60

Query: 1401 QLGVRIKDGLFYNFTGFRDQDVSSLTIFAQNNFGKTPEKKQLSISGHNWGEVDLTGNMLT 1222
            QLGV+IKDGL+Y FTGFRDQDV SLT F QN  G + E+KQLS+SG NWGEVDL GNML 
Sbjct: 61   QLGVQIKDGLYYKFTGFRDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120

Query: 1221 FLVGLKQAFEVSLADVSRTQLQGKNKVMLEFHMDDTTGSNEKDSLMEIRFHIPNSNAQYV 1042
            F VG KQAFEVSLADVS+TQLQGKN V+LEFH+DDTTG+NEKDSLMEI FHIPNSN Q+V
Sbjct: 121  FTVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 1041 GDETRPPAQVFCDKLMSMADVGASGEDAVATFEGIAVLTPRGRYNVELHLSFFRLQGQAM 862
            GDE RPPAQVF DK+MSMADVGA GEDA+ TFEGIA+LTPRGRY+VELH+SF RLQGQA 
Sbjct: 181  GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 240

Query: 861  DFKIQYSSIARLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQLKTDFVVESTLSMN 682
            DFKIQYSS+ RLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+Q +TD+VVES L++N
Sbjct: 241  DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAIN 300

Query: 681  EDLLNRKYKDRLE 643
            EDL N KYKD+L+
Sbjct: 301  EDLYNTKYKDKLD 313



 Score =  213 bits (541), Expect = 2e-52
 Identities = 107/152 (70%), Positives = 126/152 (82%), Gaps = 2/152 (1%)
 Frame = -1

Query: 451 PGKFRSRQNGYAVKSSLKTEDGVLYPLEKGFFFLPKPPTLILNEEIDCLEFERLSAGGTN 272
           PGKFRS Q+GYAVKSSLK EDG+LYPLEK FFFLPKPPTLIL+EEID +EFER +AGG+N
Sbjct: 339 PGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 398

Query: 271 MHYFDLTVRLKNEQEHVFKNIQKNEYDNLFNFIRAKGLKILNLGVGAPTVDGVTAALQXX 92
           MHYFDL +RLK+EQEH+F+NIQ+NEY NL+ FI +KGLKILNLG   PTV G+   L+  
Sbjct: 399 MHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKILNLGDAQPTV-GIKKVLEND 457

Query: 91  XXDAVDPHLERLKHAT--VDSDEEDEDFVAEK 2
             DAVDPHLER+K+     +SDEED DFVA+K
Sbjct: 458 DDDAVDPHLERIKNEAGGDESDEEDSDFVADK 489