BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001951
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24963.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_002274498.1| PREDICTED: 50S ribosomal protein L1, chlorop...   441   e-121
ref|XP_004149726.1| PREDICTED: 50S ribosomal protein L1, chlorop...   438   e-120
ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|2...   438   e-120
gb|ABK96759.1| unknown [Populus trichocarpa x Populus deltoides]      437   e-120

>emb|CBI24963.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  441 bits (1134), Expect = e-121
 Identities = 220/236 (93%), Positives = 229/236 (97%)
 Frame = +2

Query: 398  RDRTRSKRFLEIQKLRETKKEYDLNTAVSLLKQMARTKFVETVEAHFRLNIDPKYNDQQL 577
            RDRTRSKRFLEIQKLRE KKEYDL TA+SLLKQMA T+FVET EAHFRLNIDPKYNDQQL
Sbjct: 105  RDRTRSKRFLEIQKLRENKKEYDLQTAISLLKQMASTRFVETAEAHFRLNIDPKYNDQQL 164

Query: 578  RATVNLPKGTGQTVKVAVLTQGEKVDEAKSAGADVVGGEDLIEQIKGGFMDFDKLIASPD 757
            RATVNLPKGTGQTVKVAVLTQGEK DEAK+AGAD+VGGEDLIEQIKGGFMDFDKLIASPD
Sbjct: 165  RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPD 224

Query: 758  MMPKVASLGKLLGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHLPFGKAD 937
            MMPKVASLGKLLGPRGLMPNPKAGTVTT+IPQAIAEFKKGKVEYRADKTGIVHLPFGKAD
Sbjct: 225  MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKKGKVEYRADKTGIVHLPFGKAD 284

Query: 938  FSEEDLLINLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLP 1105
            FSEEDLL NL+AAVKSV+TNKPSGAKGVYW+SAHICSSMGPSIRLNIREMLD+K P
Sbjct: 285  FSEEDLLANLIAAVKSVETNKPSGAKGVYWRSAHICSSMGPSIRLNIREMLDYKSP 340


>ref|XP_002274498.1| PREDICTED: 50S ribosomal protein L1, chloroplastic [Vitis vinifera]
          Length = 347

 Score =  441 bits (1134), Expect = e-121
 Identities = 220/236 (93%), Positives = 229/236 (97%)
 Frame = +2

Query: 398  RDRTRSKRFLEIQKLRETKKEYDLNTAVSLLKQMARTKFVETVEAHFRLNIDPKYNDQQL 577
            RDRTRSKRFLEIQKLRE KKEYDL TA+SLLKQMA T+FVET EAHFRLNIDPKYNDQQL
Sbjct: 109  RDRTRSKRFLEIQKLRENKKEYDLQTAISLLKQMASTRFVETAEAHFRLNIDPKYNDQQL 168

Query: 578  RATVNLPKGTGQTVKVAVLTQGEKVDEAKSAGADVVGGEDLIEQIKGGFMDFDKLIASPD 757
            RATVNLPKGTGQTVKVAVLTQGEK DEAK+AGAD+VGGEDLIEQIKGGFMDFDKLIASPD
Sbjct: 169  RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPD 228

Query: 758  MMPKVASLGKLLGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHLPFGKAD 937
            MMPKVASLGKLLGPRGLMPNPKAGTVTT+IPQAIAEFKKGKVEYRADKTGIVHLPFGKAD
Sbjct: 229  MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKKGKVEYRADKTGIVHLPFGKAD 288

Query: 938  FSEEDLLINLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLP 1105
            FSEEDLL NL+AAVKSV+TNKPSGAKGVYW+SAHICSSMGPSIRLNIREMLD+K P
Sbjct: 289  FSEEDLLANLIAAVKSVETNKPSGAKGVYWRSAHICSSMGPSIRLNIREMLDYKSP 344


>ref|XP_004149726.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis
            sativus] gi|449532743|ref|XP_004173340.1| PREDICTED: 50S
            ribosomal protein L1, chloroplastic-like [Cucumis
            sativus]
          Length = 356

 Score =  438 bits (1126), Expect = e-120
 Identities = 229/336 (68%), Positives = 261/336 (77%), Gaps = 5/336 (1%)
 Frame = +2

Query: 113  TLFPPED---SSICFKPKPIFFSSLRSFST--YSIRGRKSCNWIEFPLKLEDRTXXXXXX 277
            ++ PP+D   S + FK K +  S+++SFS+  +  R R+S +W+    +   R       
Sbjct: 20   SVHPPQDLASSLVSFKAK-LQISTIKSFSSSNFLCRSRRSPDWVFLNFQRRARQHVIVAA 78

Query: 278  XXXXXXXXXXXXXXXXXXXGVPAPVTPSXXXXXXXXXXXXRDRTRSKRFLEIQKLRETKK 457
                                 P    P             RDR RSKRFLEIQKLRE KK
Sbjct: 79   FAAEANVAEVEAEEEEGVAAAPTATAPKPKKGKAALPLK-RDRRRSKRFLEIQKLRENKK 137

Query: 458  EYDLNTAVSLLKQMARTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT 637
            EYDL TA+SLLK+M+ TKF+E+ EAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Sbjct: 138  EYDLTTAISLLKEMSSTKFIESAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT 197

Query: 638  QGEKVDEAKSAGADVVGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLLGPRGLMPN 817
            QGE+ DEAK+AGAD+VGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLLGPRGLMPN
Sbjct: 198  QGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLLGPRGLMPN 257

Query: 818  PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHLPFGKADFSEEDLLINLMAAVKSVDTN 997
            PKAGTV T++PQAIAEFK+GKVEYRADKTGIVHLPFGKA+FSEEDLLINL+AA+KS++TN
Sbjct: 258  PKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKANFSEEDLLINLLAAIKSIETN 317

Query: 998  KPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLP 1105
            KPSGAKGVYW+SAHICSSMGPSIRLNIR+MLDFKLP
Sbjct: 318  KPSGAKGVYWRSAHICSSMGPSIRLNIRDMLDFKLP 353


>ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|222845674|gb|EEE83221.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  438 bits (1126), Expect = e-120
 Identities = 232/336 (69%), Positives = 255/336 (75%), Gaps = 9/336 (2%)
 Frame = +2

Query: 125  PED---SSICFKPKPIFFSSLRSFSTYSIRGRKSCNWIEFPLKLEDRTXXXXXXXXXXXX 295
            P+D   S + FKPK +    L       +  RKS NW++F  + E ++            
Sbjct: 24   PQDLTPSLLSFKPKTLSLYPL-------VSERKSSNWVKFYAQTEAKSRPCRVVVAAALA 76

Query: 296  XXXXXXXXXXXXXG------VPAPVTPSXXXXXXXXXXXXRDRTRSKRFLEIQKLRETKK 457
                         G        A V P             RDRTRSKRFLEIQKLRE KK
Sbjct: 77   AEAEVGEEVEETEGEEGGGVATATVIPPKPKKGKAALPLKRDRTRSKRFLEIQKLREIKK 136

Query: 458  EYDLNTAVSLLKQMARTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT 637
            EYDL  A+SLLK+ A TKFVE+ EAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Sbjct: 137  EYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT 196

Query: 638  QGEKVDEAKSAGADVVGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLLGPRGLMPN 817
            QGEK DEAK+AGAD+VGGEDLI+QIKGG+M+FDKLIASPDMMPKVASLGK+LGPRGLMPN
Sbjct: 197  QGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLIASPDMMPKVASLGKILGPRGLMPN 256

Query: 818  PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHLPFGKADFSEEDLLINLMAAVKSVDTN 997
            PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVH+PFGKADFSEEDLL+NL+AAVKSV+ N
Sbjct: 257  PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPFGKADFSEEDLLVNLLAAVKSVEAN 316

Query: 998  KPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLP 1105
            KPSGAKGVYWKSAHICSSMGPSIRLN REMLD+KLP
Sbjct: 317  KPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKLP 352


>gb|ABK96759.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 355

 Score =  437 bits (1125), Expect = e-120
 Identities = 231/336 (68%), Positives = 255/336 (75%), Gaps = 9/336 (2%)
 Frame = +2

Query: 125  PED---SSICFKPKPIFFSSLRSFSTYSIRGRKSCNWIEFPLKLEDRTXXXXXXXXXXXX 295
            P+D   S + FKPK +    L       +  RKS NW++F  + E ++            
Sbjct: 24   PQDLTPSLLSFKPKTLSLYPL-------VSERKSSNWVKFYAQTEAKSRPCRVVVAAALA 76

Query: 296  XXXXXXXXXXXXXG------VPAPVTPSXXXXXXXXXXXXRDRTRSKRFLEIQKLRETKK 457
                         G        A V P             RDRTRSKRFLEIQKLRE KK
Sbjct: 77   AEAEVGEEVEETEGEEGGGVATATVIPPKPKKGKAALPLKRDRTRSKRFLEIQKLREIKK 136

Query: 458  EYDLNTAVSLLKQMARTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT 637
            EYDL  A+SLLK+ A TKFVE+ EAHFRLNIDPKYNDQQLRATVNLPKGTGQT+KVAVLT
Sbjct: 137  EYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTIKVAVLT 196

Query: 638  QGEKVDEAKSAGADVVGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLLGPRGLMPN 817
            QGEK DEAK+AGAD+VGGEDLI+QIKGG+M+FDKLIASPDMMPKVASLGK+LGPRGLMPN
Sbjct: 197  QGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLIASPDMMPKVASLGKILGPRGLMPN 256

Query: 818  PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHLPFGKADFSEEDLLINLMAAVKSVDTN 997
            PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVH+PFGKADFSEEDLL+NL+AAVKSV+ N
Sbjct: 257  PKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPFGKADFSEEDLLVNLLAAVKSVEAN 316

Query: 998  KPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLP 1105
            KPSGAKGVYWKSAHICSSMGPSIRLN REMLD+KLP
Sbjct: 317  KPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKLP 352