BLASTX nr result

ID: Cimicifuga21_contig00001925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001925
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269008.1| PREDICTED: uncharacterized protein LOC100267...   286   5e-75
ref|XP_004135229.1| PREDICTED: uncharacterized protein LOC101211...   273   4e-71
ref|XP_003628665.1| LSM12-like protein [Medicago truncatula] gi|...   269   6e-70
ref|XP_002531404.1| conserved hypothetical protein [Ricinus comm...   265   1e-68
ref|XP_002311583.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68

>ref|XP_002269008.1| PREDICTED: uncharacterized protein LOC100267269 [Vitis vinifera]
          Length = 178

 Score =  286 bits (732), Expect = 5e-75
 Identities = 143/177 (80%), Positives = 161/177 (90%)
 Frame = +3

Query: 99  MDASNSDEFVVGCFIAIKTTLGDEFEGQIVTFDRLSNVLVLQEGAKSTPRRNIRLLKANY 278
           MDAS+ DEF VGC ++IKT+LGDEFEGQI+T+DR SN+LVLQEG+ S PRRNIRLLKANY
Sbjct: 1   MDASSGDEFAVGCILSIKTSLGDEFEGQIITYDRPSNILVLQEGSDSGPRRNIRLLKANY 60

Query: 279 IKEFAVLGQAEDPLDPKECYVDLKSLQAREESAIRQAEMEAERIGVGVTNEAQNIFDALS 458
           IKEF+ LGQAEDPLDPK+C +DL +LQAREE AIRQAE +AERIGVGVT EAQNIFDALS
Sbjct: 61  IKEFSYLGQAEDPLDPKKCCIDLNALQAREEVAIRQAEADAERIGVGVTVEAQNIFDALS 120

Query: 459 KTLPVRWDRTAIVVMNEVRVSSPYLPENVIGGTAAANDRVKKVLEFERKRLRLQVRG 629
           KTLPVRWD+TAIVVMNEVRVSSPYLPE+V GGT AAN+RVKKVLEFERKRL+ +V G
Sbjct: 121 KTLPVRWDKTAIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEFERKRLQARVAG 177


>ref|XP_004135229.1| PREDICTED: uncharacterized protein LOC101211481 [Cucumis sativus]
           gi|449478540|ref|XP_004155346.1| PREDICTED:
           uncharacterized LOC101211481 [Cucumis sativus]
          Length = 181

 Score =  273 bits (698), Expect = 4e-71
 Identities = 141/183 (77%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
 Frame = +3

Query: 93  MAMDAS-NSDEFVVGCFIAIKTTLGDEFEGQIVTFDRLSNVLVLQEGAKSTPRRNIRLLK 269
           MA+D S N D+F VG F +IKTTLGDEF+GQ++TFDR SN+LVLQEG+K  PRRNIRLLK
Sbjct: 1   MALDGSGNGDDFSVGSFFSIKTTLGDEFQGQVITFDRPSNILVLQEGSKPGPRRNIRLLK 60

Query: 270 ANYIKEFAVLGQAEDPLDPKECYVDLKSLQAREESAIRQAEMEAERIGVGVTNEAQNIFD 449
           ANYIKEF+ LG  EDPLD K CY+DL +L+AREE AIRQAE EAERIGVGVT+EAQ+IFD
Sbjct: 61  ANYIKEFSFLGHGEDPLDLKNCYLDLNTLRAREELAIRQAEAEAERIGVGVTSEAQSIFD 120

Query: 450 ALSKTLPVRWDRTAIVVMNEVRVSSPYLPENVIGGTAAANDRVKKVLEFERKRLRLQVRG 629
           ALSKTLPVRWD+T IVVMNEVRVSSPYLPE+V GGT AAN+RVKKVLE+ERK  RLQVRG
Sbjct: 121 ALSKTLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEWERK--RLQVRG 178

Query: 630 PGR 638
            G+
Sbjct: 179 GGQ 181


>ref|XP_003628665.1| LSM12-like protein [Medicago truncatula]
           gi|355522687|gb|AET03141.1| LSM12-like protein [Medicago
           truncatula] gi|388519341|gb|AFK47732.1| unknown
           [Medicago truncatula]
          Length = 188

 Score =  269 bits (688), Expect = 6e-70
 Identities = 139/187 (74%), Positives = 158/187 (84%), Gaps = 5/187 (2%)
 Frame = +3

Query: 90  AMAMDA-----SNSDEFVVGCFIAIKTTLGDEFEGQIVTFDRLSNVLVLQEGAKSTPRRN 254
           AM M++     +N DEF VGCF++I+TTLGDEFEGQ+VTFDR SN LVLQEG+K  PRRN
Sbjct: 2   AMTMESGSNNNNNGDEFAVGCFLSIRTTLGDEFEGQVVTFDRDSNYLVLQEGSKHGPRRN 61

Query: 255 IRLLKANYIKEFAVLGQAEDPLDPKECYVDLKSLQAREESAIRQAEMEAERIGVGVTNEA 434
           IRLLKA+YIK+F  LGQ +DPLDP  C +D+ +LQ+REE AIRQAE +AERIGVGVT+EA
Sbjct: 62  IRLLKADYIKDFTFLGQGQDPLDPNHCLLDINALQSREELAIRQAEADAERIGVGVTSEA 121

Query: 435 QNIFDALSKTLPVRWDRTAIVVMNEVRVSSPYLPENVIGGTAAANDRVKKVLEFERKRLR 614
           QNIFDALSKTLPVRWD+T IVVMNEVRVSSPY  E VIGGT AANDRVKKVLEFERK  R
Sbjct: 122 QNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYHSECVIGGTPAANDRVKKVLEFERK--R 179

Query: 615 LQVRGPG 635
           LQ+RG G
Sbjct: 180 LQLRGSG 186


>ref|XP_002531404.1| conserved hypothetical protein [Ricinus communis]
           gi|223528997|gb|EEF30988.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  265 bits (676), Expect = 1e-68
 Identities = 135/177 (76%), Positives = 153/177 (86%)
 Frame = +3

Query: 108 SNSDEFVVGCFIAIKTTLGDEFEGQIVTFDRLSNVLVLQEGAKSTPRRNIRLLKANYIKE 287
           +NS+EF VGCF++IKT LGDEFEGQ++TFDR SN+L    G+K  PRRNIR LKANYIKE
Sbjct: 7   NNSEEFAVGCFLSIKTILGDEFEGQVITFDRPSNIL----GSKHGPRRNIRFLKANYIKE 62

Query: 288 FAVLGQAEDPLDPKECYVDLKSLQAREESAIRQAEMEAERIGVGVTNEAQNIFDALSKTL 467
           F+ LGQAEDPLD K+CY+DL SLQAREE A+RQAE EAER+GVGVT EAQNIFDALSKTL
Sbjct: 63  FSFLGQAEDPLDVKKCYIDLHSLQAREELALRQAEAEAERLGVGVTAEAQNIFDALSKTL 122

Query: 468 PVRWDRTAIVVMNEVRVSSPYLPENVIGGTAAANDRVKKVLEFERKRLRLQVRGPGR 638
           PVRWD+T IVVMNEVRV++PYLPE V GGT AAN+RVKKVLEFERK  RLQ RG G+
Sbjct: 123 PVRWDKTVIVVMNEVRVNNPYLPECVSGGTPAANERVKKVLEFERK--RLQARGTGQ 177


>ref|XP_002311583.1| predicted protein [Populus trichocarpa] gi|222851403|gb|EEE88950.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  263 bits (673), Expect = 3e-68
 Identities = 133/178 (74%), Positives = 154/178 (86%)
 Frame = +3

Query: 105 ASNSDEFVVGCFIAIKTTLGDEFEGQIVTFDRLSNVLVLQEGAKSTPRRNIRLLKANYIK 284
           +S+S++F VGC ++IKTTLG+EF+GQ++TFDR SN+LVLQEG+K  P+RNIR LKANYIK
Sbjct: 14  SSSSEDFAVGCLLSIKTTLGEEFDGQVMTFDRPSNILVLQEGSKHGPKRNIRFLKANYIK 73

Query: 285 EFAVLGQAEDPLDPKECYVDLKSLQAREESAIRQAEMEAERIGVGVTNEAQNIFDALSKT 464
           EF+ +GQAEDPLD K+CY+DL SLQAREE A+RQAE +AERIGVGVT EAQ+IFDALSKT
Sbjct: 74  EFSFVGQAEDPLDIKKCYIDLHSLQAREELALRQAEADAERIGVGVTAEAQSIFDALSKT 133

Query: 465 LPVRWDRTAIVVMNEVRVSSPYLPENVIGGTAAANDRVKKVLEFERKRLRLQVRGPGR 638
           LPVRWD+T IVVMNEVRV SPYL E V GGT AANDRVKKVLE ERK  RLQ RG  R
Sbjct: 134 LPVRWDKTVIVVMNEVRVGSPYLAECVSGGTPAANDRVKKVLELERK--RLQARGASR 189


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