BLASTX nr result

ID: Cimicifuga21_contig00001912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001912
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   143   1e-32
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   143   1e-32
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   143   1e-32
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   143   2e-32

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -3

Query: 209 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 30
           TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 343 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 402

Query: 29  QDLAVTDIA 3
           QDL+VTDIA
Sbjct: 403 QDLSVTDIA 411


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -3

Query: 209 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 30
           TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 168 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 227

Query: 29  QDLAVTDIA 3
           QDL+VTDIA
Sbjct: 228 QDLSVTDIA 236


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
           gi|223535572|gb|EEF37240.1| splicing factor u2af large
           subunit, putative [Ricinus communis]
          Length = 549

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -3

Query: 209 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 30
           TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 365 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 424

Query: 29  QDLAVTDIA 3
           QDL+VTDIA
Sbjct: 425 QDLSVTDIA 433


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -3

Query: 209 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 30
           TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 340 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 399

Query: 29  QDLAVTDIA 3
           QDL+VTDIA
Sbjct: 400 QDLSVTDIA 408


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = -3

Query: 209 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 30
           TPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 363 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 422

Query: 29  QDLAVTDIA 3
           QDL+VTDIA
Sbjct: 423 QDLSVTDIA 431


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