BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001887
         (1584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265609.1| PREDICTED: 26S proteasome non-ATPase regulat...   422   e-115
ref|XP_002311105.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115
ref|XP_002277010.1| PREDICTED: 26S proteasome non-ATPase regulat...   419   e-114
ref|XP_002319533.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_002315028.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113

>ref|XP_002265609.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 [Vitis
            vinifera] gi|147800876|emb|CAN73333.1| hypothetical
            protein VITISV_035135 [Vitis vinifera]
          Length = 422

 Score =  422 bits (1086), Expect = e-115
 Identities = 223/285 (78%), Positives = 236/285 (82%)
 Frame = -1

Query: 1065 MENKEYSEALTILSGLVKXXXXXXXXXXXXXXXXXXXXLHFSLRXXXXXXXXXXXXXXXX 886
            MENKEYSEALT+LSGL+K                    LHFSLR                
Sbjct: 138  MENKEYSEALTLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAA 197

Query: 885  XAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALEDPRAVFSLKYMLLCK 706
             AIYVPPAQQGTIDLQSGILHAEEKDYKT YSY       FNALEDPRAVFSLKYMLLCK
Sbjct: 198  NAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEDPRAVFSLKYMLLCK 257

Query: 705  IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKFFETALRDYKAQLEEDPI 526
            IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAH+KRSLK FETALRD++AQLEEDPI
Sbjct: 258  IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAHAKRSLKLFETALRDFRAQLEEDPI 317

Query: 525  VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAYIAELIELPVKHVEKKLSQMILDKKFAGTL 346
            VHRHLSSLYDTLLEQNLCRLIEP+S+VEIA+IAELIELPV HVEKKLSQMILDKKFAGTL
Sbjct: 318  VHRHLSSLYDTLLEQNLCRLIEPFSKVEIAHIAELIELPVDHVEKKLSQMILDKKFAGTL 377

Query: 345  DQGAGCLIVFDDPKVDAIFPATLETISNMGKVVDSLFTRSAKIMA 211
            DQGAGCLI+F+DPK DAI+PATLETISN+GKVVDSL+ RSAKIMA
Sbjct: 378  DQGAGCLIIFEDPKTDAIYPATLETISNIGKVVDSLYVRSAKIMA 422



 Score =  161 bits (408), Expect = 4e-37
 Identities = 83/104 (79%), Positives = 96/104 (92%)
 Frame = -3

Query: 1516 MTSSYLPATTDSLAQAQEAKDPSESISILYRVLENSSSSSEALHIKEQAISNLSDFLRQE 1337
            M+SS+  ATTDS+AQA EAK PSE+ISILY ++++ SSSSEAL IKEQAI+NLSD LRQE
Sbjct: 1    MSSSHFTATTDSIAQALEAKTPSEAISILYCIIDSPSSSSEALRIKEQAITNLSDLLRQE 60

Query: 1336 NKAEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPDTSD 1205
            N+AE+LR+LLTQLRPFFSLIPKAKTAKIVRG+IDAVAKIPDTSD
Sbjct: 61   NRAEDLRNLLTQLRPFFSLIPKAKTAKIVRGVIDAVAKIPDTSD 104


>ref|XP_002311105.1| predicted protein [Populus trichocarpa] gi|222850925|gb|EEE88472.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  422 bits (1085), Expect = e-115
 Identities = 222/285 (77%), Positives = 236/285 (82%)
 Frame = -1

Query: 1065 MENKEYSEALTILSGLVKXXXXXXXXXXXXXXXXXXXXLHFSLRXXXXXXXXXXXXXXXX 886
            ME+KEYSEAL +LSGL+K                    LHFSLR                
Sbjct: 138  MESKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAA 197

Query: 885  XAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALEDPRAVFSLKYMLLCK 706
             AIYVPPAQQGTIDLQSGILHAEEKDYKTGYSY       FNALEDPRAVFSLKYMLLCK
Sbjct: 198  NAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVFSLKYMLLCK 257

Query: 705  IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKFFETALRDYKAQLEEDPI 526
            IMV+QADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLK FETALRD+KAQLEEDPI
Sbjct: 258  IMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPI 317

Query: 525  VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAYIAELIELPVKHVEKKLSQMILDKKFAGTL 346
            VHRHLSSLYDTLLEQNLCRLIEP+SRVEIA+IA+LIELP+ HVEKKLSQMILDKKFAGTL
Sbjct: 318  VHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIADLIELPIDHVEKKLSQMILDKKFAGTL 377

Query: 345  DQGAGCLIVFDDPKVDAIFPATLETISNMGKVVDSLFTRSAKIMA 211
            DQGAGCL++FDDPK DAI+PATLETISN+GKVVDSL+ RSAKIMA
Sbjct: 378  DQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA 422



 Score =  167 bits (422), Expect = 9e-39
 Identities = 86/104 (82%), Positives = 97/104 (93%)
 Frame = -3

Query: 1516 MTSSYLPATTDSLAQAQEAKDPSESISILYRVLENSSSSSEALHIKEQAISNLSDFLRQE 1337
            M++SYLPATTDS+AQA EAK+PSESISI YR+LE+ SSS E+L IKEQ+I+NLSD LRQE
Sbjct: 1    MSTSYLPATTDSIAQALEAKNPSESISIFYRILESPSSSPESLRIKEQSITNLSDLLRQE 60

Query: 1336 NKAEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPDTSD 1205
            N+AEELRSLLTQLRPFF+LIPKAKTAKIVRGIIDAVAKIP TSD
Sbjct: 61   NRAEELRSLLTQLRPFFALIPKAKTAKIVRGIIDAVAKIPGTSD 104


>ref|XP_002277010.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 isoform 2
            [Vitis vinifera] gi|225451257|ref|XP_002276988.1|
            PREDICTED: 26S proteasome non-ATPase regulatory subunit
            11 isoform 1 [Vitis vinifera]
            gi|359487820|ref|XP_003633654.1| PREDICTED: 26S
            proteasome non-ATPase regulatory subunit 11 [Vitis
            vinifera] gi|147811910|emb|CAN63723.1| hypothetical
            protein VITISV_021756 [Vitis vinifera]
          Length = 422

 Score =  419 bits (1077), Expect = e-114
 Identities = 222/285 (77%), Positives = 236/285 (82%)
 Frame = -1

Query: 1065 MENKEYSEALTILSGLVKXXXXXXXXXXXXXXXXXXXXLHFSLRXXXXXXXXXXXXXXXX 886
            ME+KEYSEALT+LSGL+K                    LHFSLR                
Sbjct: 138  MESKEYSEALTLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAA 197

Query: 885  XAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALEDPRAVFSLKYMLLCK 706
             AIYVPPAQQGTIDLQSGILHAEEKDYKT YSY       FNALE+PRAVFSLKYMLLCK
Sbjct: 198  NAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEEPRAVFSLKYMLLCK 257

Query: 705  IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKFFETALRDYKAQLEEDPI 526
            IMV+QADDVAGIISSKAGLQYVGPELDAMKAVADAH+KRSLK FETALR+YKAQLEEDPI
Sbjct: 258  IMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHAKRSLKLFETALRNYKAQLEEDPI 317

Query: 525  VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAYIAELIELPVKHVEKKLSQMILDKKFAGTL 346
            VHRHLSSLYDTLLEQNLCRLIEP+SRVEIA+IAELIELPV HVEKKLSQMILDKKFAGTL
Sbjct: 318  VHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPVDHVEKKLSQMILDKKFAGTL 377

Query: 345  DQGAGCLIVFDDPKVDAIFPATLETISNMGKVVDSLFTRSAKIMA 211
            DQGAGCLI+F+DPK DAI+PATLETISN+GKVVDSL+ RSAKIMA
Sbjct: 378  DQGAGCLIIFEDPKTDAIYPATLETISNIGKVVDSLYVRSAKIMA 422



 Score =  171 bits (433), Expect = 5e-40
 Identities = 89/104 (85%), Positives = 99/104 (95%)
 Frame = -3

Query: 1516 MTSSYLPATTDSLAQAQEAKDPSESISILYRVLENSSSSSEALHIKEQAISNLSDFLRQE 1337
            MTSSYLPATT+S+AQA EAK PSE+ISILYRV++N SSSSE+L IKEQAI+NLSD LRQE
Sbjct: 1    MTSSYLPATTESIAQALEAKTPSEAISILYRVIDNPSSSSESLRIKEQAITNLSDLLRQE 60

Query: 1336 NKAEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPDTSD 1205
            ++AEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIP+TSD
Sbjct: 61   SRAEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPNTSD 104


>ref|XP_002319533.1| predicted protein [Populus trichocarpa] gi|222857909|gb|EEE95456.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  418 bits (1074), Expect = e-114
 Identities = 221/285 (77%), Positives = 234/285 (82%)
 Frame = -1

Query: 1065 MENKEYSEALTILSGLVKXXXXXXXXXXXXXXXXXXXXLHFSLRXXXXXXXXXXXXXXXX 886
            MENKEYSEAL +LSGL+K                    LHFSLR                
Sbjct: 138  MENKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAA 197

Query: 885  XAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALEDPRAVFSLKYMLLCK 706
             AIYVPPAQQGTIDLQSGILHAEEKDYKT YSY       FNALEDPRAVFSLKYMLLCK
Sbjct: 198  NAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEDPRAVFSLKYMLLCK 257

Query: 705  IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKFFETALRDYKAQLEEDPI 526
            IMV+QADDVAGIISSKAGLQYVGPELDAMKAVADAH+KRSLK FETALRD+KAQLEEDPI
Sbjct: 258  IMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHAKRSLKLFETALRDFKAQLEEDPI 317

Query: 525  VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAYIAELIELPVKHVEKKLSQMILDKKFAGTL 346
            VHRHLSSLYDTLLEQNLCRLIEP+SRVEIA+IA+LIEL V HVEKKLSQMILDKKFAGTL
Sbjct: 318  VHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIADLIELSVDHVEKKLSQMILDKKFAGTL 377

Query: 345  DQGAGCLIVFDDPKVDAIFPATLETISNMGKVVDSLFTRSAKIMA 211
            DQGAGCL++FDDPK DAI+PATLETISN+GKVVDSL+ RSAKIMA
Sbjct: 378  DQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA 422



 Score =  162 bits (411), Expect = 2e-37
 Identities = 84/104 (80%), Positives = 94/104 (90%)
 Frame = -3

Query: 1516 MTSSYLPATTDSLAQAQEAKDPSESISILYRVLENSSSSSEALHIKEQAISNLSDFLRQE 1337
            M++ YLPATTDS+ QA EAK+PSE ISILYR+LEN SSS E+L IKEQAI+NLSD LRQE
Sbjct: 1    MSTPYLPATTDSIDQALEAKNPSEGISILYRILENPSSSPESLRIKEQAITNLSDLLRQE 60

Query: 1336 NKAEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPDTSD 1205
            N+AEELRSLLT LRPFF+LIPKAKTAKIVRG+IDAVAKIP TSD
Sbjct: 61   NRAEELRSLLTLLRPFFALIPKAKTAKIVRGVIDAVAKIPGTSD 104


>ref|XP_002315028.1| predicted protein [Populus trichocarpa] gi|222864068|gb|EEF01199.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  415 bits (1067), Expect = e-113
 Identities = 219/285 (76%), Positives = 234/285 (82%)
 Frame = -1

Query: 1065 MENKEYSEALTILSGLVKXXXXXXXXXXXXXXXXXXXXLHFSLRXXXXXXXXXXXXXXXX 886
            MENKEYSEAL +LSGL+K                    LHFSLR                
Sbjct: 138  MENKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAA 197

Query: 885  XAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALEDPRAVFSLKYMLLCK 706
             AIYVPPAQQGTIDLQSGILHAEEKDYKT YSY       FNALEDPRAVFSLKYMLLCK
Sbjct: 198  NAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEDPRAVFSLKYMLLCK 257

Query: 705  IMVNQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKFFETALRDYKAQLEEDPI 526
            IMV+QADDVAGIISSKAGLQYVGPELDAMKAVADAH+KRSLK FETALRD+KAQLEEDPI
Sbjct: 258  IMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHAKRSLKLFETALRDFKAQLEEDPI 317

Query: 525  VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAYIAELIELPVKHVEKKLSQMILDKKFAGTL 346
            VHRHLSSLYDTLLEQNLCRLIEP+SRVEIA+IA+LIELP+ HVEKKLSQMILDKKFAGTL
Sbjct: 318  VHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIADLIELPIDHVEKKLSQMILDKKFAGTL 377

Query: 345  DQGAGCLIVFDDPKVDAIFPATLETISNMGKVVDSLFTRSAKIMA 211
            DQGAGCL++F+D K DAI+PATLETISN+GKVVDSL+ RSAKIMA
Sbjct: 378  DQGAGCLVIFEDLKTDAIYPATLETISNIGKVVDSLYVRSAKIMA 422



 Score =  160 bits (405), Expect = 9e-37
 Identities = 83/104 (79%), Positives = 95/104 (91%)
 Frame = -3

Query: 1516 MTSSYLPATTDSLAQAQEAKDPSESISILYRVLENSSSSSEALHIKEQAISNLSDFLRQE 1337
            M++S+LPATTDS+AQA EAK+PSE+ISI Y +LEN SSS E+L IKEQAI+NLSD LRQE
Sbjct: 1    MSTSHLPATTDSIAQALEAKNPSEAISIYYIILENPSSSPESLRIKEQAITNLSDLLRQE 60

Query: 1336 NKAEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPDTSD 1205
            N+AEELRSLLT+LRPFF+LIPKAKTAKIVRGIID VAKIP TSD
Sbjct: 61   NRAEELRSLLTKLRPFFALIPKAKTAKIVRGIIDTVAKIPGTSD 104