BLASTX nr result

ID: Cimicifuga21_contig00001873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001873
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300404.1| predicted protein [Populus trichocarpa] gi|2...   548   e-153
ref|XP_002518362.1| zinc binding dehydrogenase, putative [Ricinu...   542   e-151
emb|CBI20237.3| unnamed protein product [Vitis vinifera]              536   e-150
ref|XP_002285254.1| PREDICTED: reticulon-4-interacting protein 1...   536   e-150
ref|XP_003540476.1| PREDICTED: reticulon-4-interacting protein 1...   525   e-146

>ref|XP_002300404.1| predicted protein [Populus trichocarpa] gi|222847662|gb|EEE85209.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  548 bits (1412), Expect = e-153
 Identities = 271/341 (79%), Positives = 306/341 (89%)
 Frame = -3

Query: 1244 RTIVTTCRAVVLPRFGGPDVLEIRPNVEVPDLKPHDVLVRARAVSINPLDTRMRSGYGRS 1065
            R I T+CRAVVLPRFGGP++L++R +VEVP LKP++VLVRARAVSINPLDTRMRSGYGRS
Sbjct: 2    RFIATSCRAVVLPRFGGPEMLQLRSDVEVPQLKPNEVLVRARAVSINPLDTRMRSGYGRS 61

Query: 1064 IFAPLLPLILGRDISGEVAAVGGSVRSLNVGQEVFGALHPTAMRGTYTDFAILTEEELAP 885
            IF PLLPLILGRDISGEVAAVG SVRS +VG+EVFGALHPTA+RGTYTD+A+L+E+ELAP
Sbjct: 62   IFEPLLPLILGRDISGEVAAVGNSVRSFSVGEEVFGALHPTAVRGTYTDYAVLSEDELAP 121

Query: 884  KPPSVSHVDASAIPFAALTAWRALKSTARIAEGQRLXXXXXXXXXXXXXIQLAAAVGCHV 705
            KPPS++HV+ASAIPFAALTAWRALKSTARI EGQR+             IQLAAA  CHV
Sbjct: 122  KPPSLTHVEASAIPFAALTAWRALKSTARITEGQRILVVGGGGAVGLAAIQLAAAARCHV 181

Query: 704  ATTCGSRSVNRVLEAGAEQAIDYTAEDIESAIKGQFDAVLDTIGVPETERVGINFLKRGG 525
             TTCG +S++RVLEAGAEQA+DYTAEDIE AIKG+FDAVLDTIGVPETER+GI FLKRGG
Sbjct: 182  TTTCGGQSIDRVLEAGAEQAVDYTAEDIELAIKGKFDAVLDTIGVPETERIGIKFLKRGG 241

Query: 524  HYMTLQGEAASLSDRYGIVVGLPMATAILLKKQSQYRYSHGIDYSWTYMRADSEGLDEIR 345
            HYMTLQGEAASL+DRYG+V GLPMATAILLKKQ QYRYSHGI+Y WTYMRADS+GLDEI 
Sbjct: 242  HYMTLQGEAASLTDRYGLVAGLPMATAILLKKQIQYRYSHGIEYWWTYMRADSDGLDEIH 301

Query: 344  RLMEVGRLKVPVDKTFPITQVKEAHEAKDKKLIPGKVVLEV 222
            RL E G++K+PV+KTFPITQ +EAHEAKDKK IPGKVVLE+
Sbjct: 302  RLSEAGKMKIPVEKTFPITQAREAHEAKDKKKIPGKVVLEL 342


>ref|XP_002518362.1| zinc binding dehydrogenase, putative [Ricinus communis]
            gi|223542457|gb|EEF43998.1| zinc binding dehydrogenase,
            putative [Ricinus communis]
          Length = 365

 Score =  542 bits (1396), Expect = e-151
 Identities = 272/347 (78%), Positives = 307/347 (88%)
 Frame = -3

Query: 1259 KLGFNRTIVTTCRAVVLPRFGGPDVLEIRPNVEVPDLKPHDVLVRARAVSINPLDTRMRS 1080
            KLG  R +VT+CRAVVLPRFGGP+VLE+R +VEVP +KP++VLVR RAVS+NPLDTRMRS
Sbjct: 19   KLGSVRFLVTSCRAVVLPRFGGPEVLELRSDVEVPQIKPNEVLVRTRAVSVNPLDTRMRS 78

Query: 1079 GYGRSIFAPLLPLILGRDISGEVAAVGGSVRSLNVGQEVFGALHPTAMRGTYTDFAILTE 900
            GYGRSIF PLLPLILGRDISGEV A+G SV+SL+VGQEVFGALHPTA+RGTYTD+AIL+E
Sbjct: 79   GYGRSIFEPLLPLILGRDISGEVTAIGTSVQSLSVGQEVFGALHPTAVRGTYTDYAILSE 138

Query: 899  EELAPKPPSVSHVDASAIPFAALTAWRALKSTARIAEGQRLXXXXXXXXXXXXXIQLAAA 720
            +EL  KP SVSHV+ASAIPFAALTAWRALKSTARI EGQR+             IQLA A
Sbjct: 139  DELTAKPASVSHVEASAIPFAALTAWRALKSTARINEGQRVLIVGGGGAVGFAAIQLAVA 198

Query: 719  VGCHVATTCGSRSVNRVLEAGAEQAIDYTAEDIESAIKGQFDAVLDTIGVPETERVGINF 540
             GCHV  TCGS S++RVL+AGAE+AIDY AEDIE AIKG+FDAVLDTIGVPETER+GINF
Sbjct: 199  AGCHVTATCGSLSIDRVLKAGAERAIDYIAEDIELAIKGKFDAVLDTIGVPETERIGINF 258

Query: 539  LKRGGHYMTLQGEAASLSDRYGIVVGLPMATAILLKKQSQYRYSHGIDYSWTYMRADSEG 360
            LKRGG YMTLQGEAAS++DRYGI VGLP+ATAILLKKQ QYRYSHGI+Y WTYMRADS+G
Sbjct: 259  LKRGGQYMTLQGEAASVTDRYGIAVGLPIATAILLKKQIQYRYSHGIEYWWTYMRADSDG 318

Query: 359  LDEIRRLMEVGRLKVPVDKTFPITQVKEAHEAKDKKLIPGKVVLEVD 219
            LDEIRRL E G+LKVPV+KTFP TQV+EAHEAK+K+LIPGKVVLE+D
Sbjct: 319  LDEIRRLSEAGKLKVPVEKTFPFTQVREAHEAKEKRLIPGKVVLELD 365


>emb|CBI20237.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  536 bits (1380), Expect = e-150
 Identities = 269/342 (78%), Positives = 299/342 (87%)
 Frame = -3

Query: 1244 RTIVTTCRAVVLPRFGGPDVLEIRPNVEVPDLKPHDVLVRARAVSINPLDTRMRSGYGRS 1065
            R IVTTCRAVVLPRFGGP VLE+RP+  VPDLKP +VLVR RAVSINPLDTRMRSGYGRS
Sbjct: 55   RFIVTTCRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGRS 114

Query: 1064 IFAPLLPLILGRDISGEVAAVGGSVRSLNVGQEVFGALHPTAMRGTYTDFAILTEEELAP 885
            IF PLLPLILGRDISGEVAA G SVRSL+VGQEVFGALHPTA+RGTY D+AIL+E+EL  
Sbjct: 115  IFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELTS 174

Query: 884  KPPSVSHVDASAIPFAALTAWRALKSTARIAEGQRLXXXXXXXXXXXXXIQLAAAVGCHV 705
            KP S+SHV+ASAIPFAALTAWRALKSTARIAEGQR+             IQL  A GCHV
Sbjct: 175  KPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGCHV 234

Query: 704  ATTCGSRSVNRVLEAGAEQAIDYTAEDIESAIKGQFDAVLDTIGVPETERVGINFLKRGG 525
            +TTCGS+S+  +L AGAEQA+DYT+EDIESA+KG FDAVLDTIGVP+TERVGIN LKRGG
Sbjct: 235  STTCGSQSLAWILAAGAEQAVDYTSEDIESALKGNFDAVLDTIGVPDTERVGINLLKRGG 294

Query: 524  HYMTLQGEAASLSDRYGIVVGLPMATAILLKKQSQYRYSHGIDYSWTYMRADSEGLDEIR 345
            HYMTLQGEAASLSDRYG+ VGLP ATA+LLKKQ QYR+SHGI+YSWTYMRADSEGL EI 
Sbjct: 295  HYMTLQGEAASLSDRYGLAVGLPAATAMLLKKQLQYRFSHGIEYSWTYMRADSEGLYEIC 354

Query: 344  RLMEVGRLKVPVDKTFPITQVKEAHEAKDKKLIPGKVVLEVD 219
            +L E G+LK+PV+KTFPITQV+EAHEAKD + IPGKVVLE+D
Sbjct: 355  KLSEAGKLKIPVEKTFPITQVREAHEAKDNRQIPGKVVLELD 396


>ref|XP_002285254.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Vitis
            vinifera]
          Length = 361

 Score =  536 bits (1380), Expect = e-150
 Identities = 269/342 (78%), Positives = 299/342 (87%)
 Frame = -3

Query: 1244 RTIVTTCRAVVLPRFGGPDVLEIRPNVEVPDLKPHDVLVRARAVSINPLDTRMRSGYGRS 1065
            R IVTTCRAVVLPRFGGP VLE+RP+  VPDLKP +VLVR RAVSINPLDTRMRSGYGRS
Sbjct: 20   RFIVTTCRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGRS 79

Query: 1064 IFAPLLPLILGRDISGEVAAVGGSVRSLNVGQEVFGALHPTAMRGTYTDFAILTEEELAP 885
            IF PLLPLILGRDISGEVAA G SVRSL+VGQEVFGALHPTA+RGTY D+AIL+E+EL  
Sbjct: 80   IFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELTS 139

Query: 884  KPPSVSHVDASAIPFAALTAWRALKSTARIAEGQRLXXXXXXXXXXXXXIQLAAAVGCHV 705
            KP S+SHV+ASAIPFAALTAWRALKSTARIAEGQR+             IQL  A GCHV
Sbjct: 140  KPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGCHV 199

Query: 704  ATTCGSRSVNRVLEAGAEQAIDYTAEDIESAIKGQFDAVLDTIGVPETERVGINFLKRGG 525
            +TTCGS+S+  +L AGAEQA+DYT+EDIESA+KG FDAVLDTIGVP+TERVGIN LKRGG
Sbjct: 200  STTCGSQSLAWILAAGAEQAVDYTSEDIESALKGNFDAVLDTIGVPDTERVGINLLKRGG 259

Query: 524  HYMTLQGEAASLSDRYGIVVGLPMATAILLKKQSQYRYSHGIDYSWTYMRADSEGLDEIR 345
            HYMTLQGEAASLSDRYG+ VGLP ATA+LLKKQ QYR+SHGI+YSWTYMRADSEGL EI 
Sbjct: 260  HYMTLQGEAASLSDRYGLAVGLPAATAMLLKKQLQYRFSHGIEYSWTYMRADSEGLYEIC 319

Query: 344  RLMEVGRLKVPVDKTFPITQVKEAHEAKDKKLIPGKVVLEVD 219
            +L E G+LK+PV+KTFPITQV+EAHEAKD + IPGKVVLE+D
Sbjct: 320  KLSEAGKLKIPVEKTFPITQVREAHEAKDNRQIPGKVVLELD 361


>ref|XP_003540476.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like
            [Glycine max]
          Length = 364

 Score =  525 bits (1353), Expect = e-146
 Identities = 257/342 (75%), Positives = 302/342 (88%)
 Frame = -3

Query: 1244 RTIVTTCRAVVLPRFGGPDVLEIRPNVEVPDLKPHDVLVRARAVSINPLDTRMRSGYGRS 1065
            ++ V+ CRAV+LP FGGP VL++R +V VP LKPHDVLVRARAVS+NPLDTRMR+GYGRS
Sbjct: 23   KSYVSDCRAVLLPSFGGPHVLQLRSHVPVPPLKPHDVLVRARAVSVNPLDTRMRAGYGRS 82

Query: 1064 IFAPLLPLILGRDISGEVAAVGGSVRSLNVGQEVFGALHPTAMRGTYTDFAILTEEELAP 885
            IF PLLPLILGRD+SGEV+AVG  VRS++VG++VFGALHPTA+RGTY+D+AIL+EEE+ P
Sbjct: 83   IFEPLLPLILGRDVSGEVSAVGDKVRSVSVGEQVFGALHPTAVRGTYSDYAILSEEEVTP 142

Query: 884  KPPSVSHVDASAIPFAALTAWRALKSTARIAEGQRLXXXXXXXXXXXXXIQLAAAVGCHV 705
            KP S++HV+ASAIPFAALTAWRALKSTARI+EGQR+             +QLA A GC V
Sbjct: 143  KPDSLTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGLSAVQLAVAAGCSV 202

Query: 704  ATTCGSRSVNRVLEAGAEQAIDYTAEDIESAIKGQFDAVLDTIGVPETERVGINFLKRGG 525
            ATTCGS+SV+R+L AGA+QA+DY AED+E AIKG+FDAVLDTIGVPETER+GINFLKRGG
Sbjct: 203  ATTCGSQSVDRLLAAGADQAVDYVAEDVELAIKGKFDAVLDTIGVPETERMGINFLKRGG 262

Query: 524  HYMTLQGEAASLSDRYGIVVGLPMATAILLKKQSQYRYSHGIDYSWTYMRADSEGLDEIR 345
            HYMTLQGEAASLSDRYG+ +GLP ATA+LLKKQ  YR+SHGI+YSWTYMRAD +GL EIR
Sbjct: 263  HYMTLQGEAASLSDRYGLTIGLPAATAVLLKKQLLYRFSHGIEYSWTYMRADLDGLIEIR 322

Query: 344  RLMEVGRLKVPVDKTFPITQVKEAHEAKDKKLIPGKVVLEVD 219
            +L E G++K+PV KTFPITQVKEAHEAKDKKLIPGKVVLE+D
Sbjct: 323  KLCEAGKMKIPVYKTFPITQVKEAHEAKDKKLIPGKVVLELD 364


Top