BLASTX nr result
ID: Cimicifuga21_contig00001870
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001870
(2325 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257... 639 0.0
ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2... 595 e-167
ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218... 566 e-159
ref|XP_002518251.1| conserved hypothetical protein [Ricinus comm... 566 e-159
ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like... 560 e-157
>ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera]
gi|297737934|emb|CBI27135.3| unnamed protein product
[Vitis vinifera]
Length = 552
Score = 639 bits (1649), Expect = 0.0
Identities = 327/490 (66%), Positives = 375/490 (76%), Gaps = 4/490 (0%)
Frame = -3
Query: 1786 LVPSLKLQMDKDIYRPGDSVVVTIAIHNPR---KETNKNETDNDAKWSLLVEKLSFEIKG 1616
LVPSLKL+ DKD+YRPG+S+VV+I IHNP E +K E D LLVE LSFEIKG
Sbjct: 32 LVPSLKLRTDKDVYRPGESIVVSIEIHNPSGVVDELSKKENAGDVLCPLLVEMLSFEIKG 91
Query: 1615 YEKLDTQWFATKKQLSGSKHRRGEHVFLDGSTPSIISNQIVSSGGTKTYIVRTELPKIIP 1436
EKLD+QW+AT+K L GSK RRGEH FLD +TPSI+SNQIVS+G KTY+ RTELP I+P
Sbjct: 92 IEKLDSQWYATQKPLPGSKQRRGEHTFLDCATPSIVSNQIVSAGAVKTYVARTELPSIVP 151
Query: 1435 PTYRGTTIRYFYYVRSTLAGRWLVWENDQLRRESMKDLIQLEDRTPVNVWVSDKTSGLLV 1256
P+YRG TIRYFYYVR TL+GRWLV EN RES KDLI+LE R P+ +WV+ KTSGLL+
Sbjct: 152 PSYRGATIRYFYYVRCTLSGRWLVLENGHSPRESRKDLIELEARIPLQIWVTQKTSGLLI 211
Query: 1255 EEGATDGILPASTLGMDIYWKEKDADSEWARANETPDGIEEGYEXXXXXXXXXXSYNPTR 1076
EEG DGI+P + + MD+YWKE D DS+W RANET DG+EEGYE SYNP +
Sbjct: 212 EEGHNDGIVPNTAIQMDVYWKEMDGDSDWVRANETYDGVEEGYESSRDEVSSVSSYNPMK 271
Query: 1075 GGLDQAQGISLSRQSSAPRFLSRDAAYLHGERSSFSSYVALPQLSVDEFLYDSSGDVRSP 896
+ ++ G SLS S + R YL GER+S SSYVALP+LSV E + DSS D S
Sbjct: 272 ENIHKSFGSSLSLHSFSAR---SSTPYLEGERTSISSYVALPRLSVAEVINDSSLDALSS 328
Query: 895 KKYPNVLSPSQQRKHTNSLSTDDDTQIPSILRTIDRVASEGFVRGKSYNIRLDDQVLLRF 716
+K LSPS+QRK T +S DD+ + +I T D ASEGF+RG+SYNIRLDDQVLLRF
Sbjct: 329 QKSSANLSPSEQRKDTKPISADDEAGVSTIPGTDDPAASEGFIRGRSYNIRLDDQVLLRF 388
Query: 715 SPKTSDSTYYFGDTIGGTLTFFH-EGGRRCLEVAITLEISETIGQRIVHPSRRNSPTITK 539
SPK SDSTYYF D IGGTLTFFH EG RRCLEV+ITLE SET+ +R HPSRRNS TITK
Sbjct: 389 SPKNSDSTYYFSDMIGGTLTFFHEEGARRCLEVSITLESSETVNRRFAHPSRRNSLTITK 448
Query: 538 VQSDYHEVVADLEQTSFHFSIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHPL 359
VQSD+HEVVADL QTSF FSIPMDGPMSFSTPHVSVQWALRFEFFTT KNVD TRY+HPL
Sbjct: 449 VQSDHHEVVADLVQTSFLFSIPMDGPMSFSTPHVSVQWALRFEFFTTPKNVDLTRYEHPL 508
Query: 358 LIEGRDKGEW 329
LIEGRDK EW
Sbjct: 509 LIEGRDKCEW 518
>ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1|
predicted protein [Populus trichocarpa]
Length = 533
Score = 595 bits (1534), Expect = e-167
Identities = 307/501 (61%), Positives = 372/501 (74%), Gaps = 5/501 (0%)
Frame = -3
Query: 1816 SEEPKKDQLLLVPSLKLQMDKDIYRPGDSVVVTIAIHNPRKETNKNETDNDAKWSLLVEK 1637
S + +KD+L VP+LK+Q DKD+YRPGDS++VTI I NP K+ D SLL+EK
Sbjct: 16 SSDGRKDEL--VPTLKVQTDKDVYRPGDSILVTIEISNP-----KDGASEDVMSSLLIEK 68
Query: 1636 LSFEIKGYEKLDTQWFATKKQLSGSKHRRGEHVFLDGSTPSIISNQIVSSGGTKTYIVRT 1457
L F I+G +KLD QWFAT+K L GSK RRGEHVF+D ST SI+SNQIVSSG TKTY+VRT
Sbjct: 69 LGFAIRGIQKLDNQWFATQKPLPGSKQRRGEHVFMDCSTSSIVSNQIVSSGATKTYVVRT 128
Query: 1456 ELPKIIPPTYRGTTIRYFYYVRSTLAGRWLVWENDQLRRESMKDLIQLEDRTPVNVWVSD 1277
LP IIPP+YRG TIRY YYV STL+G+ L+ +N RES KDL+QLEDR P+ +WV+
Sbjct: 129 LLPSIIPPSYRGATIRYIYYVESTLSGQQLMLDNTNSHRESSKDLLQLEDRIPLQIWVAQ 188
Query: 1276 KTSGLLVEEGATDGILPASTLGMDIYWKEKDADSEWARANETPDGIEEGYEXXXXXXXXX 1097
K +GL+VEEG +DGI+P +T+ +DIYWKE D D+EWARAN+ DG+EEG+E
Sbjct: 189 KGNGLIVEEGQSDGIVPPTTIQLDIYWKEMDGDNEWARANDLDDGVEEGHESLRDEISSV 248
Query: 1096 XSYNPTRGGLDQAQGISLSRQSSAPRFLSRDAAYLHGERSSFSSYVALPQLSVDEFLYDS 917
SYNP R + + G SLS QS A R ++DA++ G R S S+ +ALP+LS E LYDS
Sbjct: 249 SSYNPNRESIHKTFGSSLSLQSVA-RSSNKDASFTEGGRRSLST-LALPRLSAAEVLYDS 306
Query: 916 SGDVRSPKKYPNVLSPSQQRKHTNSLSTDDDTQIPSILRTI----DRVASEGFVRGKSYN 749
D+ P K ++ PSQQ + DD + T+ + ASEGF+RG+SYN
Sbjct: 307 GADMAEPDKSSAMVFPSQQLR-------DDMAGVSYTPGTVSVNNEPAASEGFIRGRSYN 359
Query: 748 IRLDDQVLLRFSPKTSDSTYYFGDTIGGTLTFFH-EGGRRCLEVAITLEISETIGQRIVH 572
IR+DD VLLRFSP+ SDSTYYF D IGGTLTFFH EG ++CLEV+ITLE SET+ +R +H
Sbjct: 360 IRMDDHVLLRFSPRNSDSTYYFSDMIGGTLTFFHEEGAKKCLEVSITLETSETVSRRYIH 419
Query: 571 PSRRNSPTITKVQSDYHEVVADLEQTSFHFSIPMDGPMSFSTPHVSVQWALRFEFFTTRK 392
PSR+NSPTITKVQSD+HEVVADL QTSF FSIPMDGPMSFST HVSVQW LRFEFFTT K
Sbjct: 420 PSRKNSPTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTSHVSVQWVLRFEFFTTPK 479
Query: 391 NVDWTRYDHPLLIEGRDKGEW 329
NVDWTRY+HPLLIEGRDK EW
Sbjct: 480 NVDWTRYEHPLLIEGRDKSEW 500
>ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218523 [Cucumis sativus]
Length = 538
Score = 567 bits (1460), Expect(2) = e-159
Identities = 294/502 (58%), Positives = 363/502 (72%), Gaps = 3/502 (0%)
Frame = -3
Query: 1825 AVASEEPKKDQLLLVPSLKLQMDKDIYRPGDSVVVTIAIHNPRKETNKNETDNDAKWSLL 1646
A A + K + P LKL+ DKD+YRPGD VVVTI I + + + SLL
Sbjct: 14 AAADKVEKSAKSEFFPGLKLRSDKDVYRPGDPVVVTIEICSSVPQLD---------CSLL 64
Query: 1645 VEKLSFEIKGYEKLDTQWFATKKQLSGSKHRRGEHVFLDGSTPSIISNQIVSSGGTKTYI 1466
+E+L FEI G KLD QWF+T+K + GSK RRGEH+F+D S SI+S+QI+SSG K+Y+
Sbjct: 65 IERLRFEIIGLHKLDAQWFSTQKPIPGSKQRRGEHIFMDCSVQSIVSSQIISSGAMKSYV 124
Query: 1465 VRTELPKIIPPTYRGTTIRYFYYVRSTLAGRWLVWENDQLRRESMKDLIQLEDRTPVNVW 1286
VR+ LP IPP+Y+G TIRY YYV+STL GRWL EN + +ES KD I++E R P+ VW
Sbjct: 125 VRSTLPTCIPPSYKGATIRYMYYVKSTLLGRWLSQENGRSHKESPKDQIEMEARLPLQVW 184
Query: 1285 VSDKTSGLLVEEGATDGILPASTLGMDIYWKEKDADSEWARANETPDGIEEGYEXXXXXX 1106
V+ KT+G+L+EEG DG L + + MD++WKE ++D++W RAN+ DG +EGY+
Sbjct: 185 VTQKTNGMLMEEGQNDGDLSSLSFQMDVFWKEMESDTDWIRANDIYDGTDEGYDSSRDEI 244
Query: 1105 XXXXSYNPTRGGLDQAQGISLSRQSSAPRFLSRDAAYLHGERSSFSSYVALPQLSVDEFL 926
SYNP R + G SLS QSSA R + A ++ GER S SS VA P++SV E L
Sbjct: 245 SSVSSYNPMREPFHRTFGSSLSLQSSAGRSSIKIAPFIEGERLSLSSNVARPRVSVAEVL 304
Query: 925 YDSSGDVRSPKKYPNVLSPSQQRKHTNSLSTDDDTQIPSILR--TIDRVASEGFVRGKSY 752
Y+S+ DV SP+K +SPSQ + STDDD + R TI+ VASEGF+RG+SY
Sbjct: 305 YESA-DVASPQKSFAAVSPSQVLNFEKNQSTDDDAGAATSPRPKTIEPVASEGFIRGRSY 363
Query: 751 NIRLDDQVLLRFSPKTSDSTYYFGDTIGGTLTFFH-EGGRRCLEVAITLEISETIGQRIV 575
NIR+DDQVLLRF PK SDSTYYF D IGGTLTFFH EG RRCLE++ITLE SET+ +R +
Sbjct: 364 NIRVDDQVLLRFCPKNSDSTYYFSDMIGGTLTFFHEEGTRRCLELSITLETSETVSRRFI 423
Query: 574 HPSRRNSPTITKVQSDYHEVVADLEQTSFHFSIPMDGPMSFSTPHVSVQWALRFEFFTTR 395
HPSRRNSPTI KVQSD++EVVADL QTSF FSIPMDGPMSFSTPHVS+QWALRFEFFTT
Sbjct: 424 HPSRRNSPTIVKVQSDHYEVVADLIQTSFLFSIPMDGPMSFSTPHVSLQWALRFEFFTTP 483
Query: 394 KNVDWTRYDHPLLIEGRDKGEW 329
KNVDWTRY+HPLLIEGR+K EW
Sbjct: 484 KNVDWTRYEHPLLIEGREKSEW 505
Score = 23.5 bits (49), Expect(2) = e-159
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 284 TAQTRNEKSLSLGPFSLHN 228
TAQ RN++ SL P +H+
Sbjct: 520 TAQNRNDRPFSLEPLWMHS 538
>ref|XP_002518251.1| conserved hypothetical protein [Ricinus communis]
gi|223542598|gb|EEF44137.1| conserved hypothetical
protein [Ricinus communis]
Length = 528
Score = 567 bits (1460), Expect = e-159
Identities = 288/485 (59%), Positives = 352/485 (72%), Gaps = 1/485 (0%)
Frame = -3
Query: 1780 PSLKLQMDKDIYRPGDSVVVTIAIHNPRKETNKNETDNDAKWSLLVEKLSFEIKGYEKLD 1601
P++K+Q+DKD+YRPGDSV VTI I P T + + SLL+E+L FEIKG EKLD
Sbjct: 35 PTIKMQLDKDVYRPGDSVFVTIDISYP-SNTETTTLLSSSSCSLLIERLGFEIKGIEKLD 93
Query: 1600 TQWFATKKQLSGSKHRRGEHVFLDGSTPSIISNQIVSSGGTKTYIVRTELPKIIPPTYRG 1421
QWF+T K L GS H RGEHVF+ S PS++SNQI+SS +K+Y+VR ELP I+PPT+RG
Sbjct: 94 PQWFSTHKPLPGSAHSRGEHVFMVSSIPSLVSNQILSSAASKSYVVRVELPSILPPTFRG 153
Query: 1420 TTIRYFYYVRSTLAGRWLVWENDQLRRESMKDLIQLEDRTPVNVWVSDKTSGLLVEEGAT 1241
+TIRYFYYV+ TL GRWL EN RES KDLI+L+ R P+N+WV+ K++GLL+EE +
Sbjct: 154 STIRYFYYVKGTLCGRWLTLENGHSHRESSKDLIELDARVPLNIWVTQKSNGLLMEEDQS 213
Query: 1240 DGILPASTLGMDIYWKEKDADSEWARANETPDGIEEGYEXXXXXXXXXXSYNPTRGGLDQ 1061
DGI+PA+TL +D+YWK D DSEWAR N+ DG+EEGY+ SYNP++ + +
Sbjct: 214 DGIVPATTLQLDVYWKAMDGDSEWARVNDNDDGVEEGYDSSRDEISSVSSYNPSKESMHR 273
Query: 1060 AQGISLSRQSSAPRFLSRDAAYLHGERSSFSSYVALPQLSVDEFLYDSSGDVRSPKKYPN 881
G SLS QS A R+S SS V P+LSV E L+D S DV S ++ N
Sbjct: 274 TFGSSLSLQSFA-------------ARTSLSSNVGFPRLSVAEVLHDPSADVSSQQQ--N 318
Query: 880 VLSPSQQRKHTNSLSTDDDTQIPSILRTIDRVASEGFVRGKSYNIRLDDQVLLRFSPKTS 701
++ P + S + + T + ASEGF+RG+SYNIR+DDQVLLRFSPK S
Sbjct: 319 IVKPQTEDVVGESSAHG--------IGTNEASASEGFIRGRSYNIRMDDQVLLRFSPKNS 370
Query: 700 DSTYYFGDTIGGTLTFFHEGG-RRCLEVAITLEISETIGQRIVHPSRRNSPTITKVQSDY 524
DS YYF D IGGTLTFFHE G RRCLEV+ITLEISETI +R VH SRRN+P ITKVQSD+
Sbjct: 371 DSNYYFSDMIGGTLTFFHEEGCRRCLEVSITLEISETISRRFVHSSRRNAPIITKVQSDH 430
Query: 523 HEVVADLEQTSFHFSIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHPLLIEGR 344
HEVVADL QTSF FS+P+DGPMSFSTPHVSVQWALRFEF+TT KNVDWTRY+HPLL+EGR
Sbjct: 431 HEVVADLVQTSFLFSVPLDGPMSFSTPHVSVQWALRFEFYTTPKNVDWTRYEHPLLVEGR 490
Query: 343 DKGEW 329
DK EW
Sbjct: 491 DKSEW 495
>ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago
truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi
transport protein RGP1-like protein [Medicago truncatula]
Length = 529
Score = 560 bits (1443), Expect = e-157
Identities = 277/489 (56%), Positives = 360/489 (73%), Gaps = 3/489 (0%)
Frame = -3
Query: 1786 LVPSLKLQMDKDIYRPGDSVVVTIAIHNPRKETNKNETDNDAKWSLLVEKLSFEIKGYEK 1607
+VP+LKL+ DK +YRPGD V++TI I NP +S L+E+LSFEI+G EK
Sbjct: 27 IVPTLKLETDKQVYRPGDPVIITIQISNPSNG-----------YSFLMERLSFEIRGIEK 75
Query: 1606 LDTQWFATKKQLSGSKHRRGEHVFLDGSTPSIISNQIVSSGGTKTYIVRTELPKIIPPTY 1427
LDTQWFAT+K L GS+ RRGEHVF+D STP +++NQI+++G +K+Y+VRT LP IIPP+Y
Sbjct: 76 LDTQWFATQKPLPGSRQRRGEHVFVDSSTPILVANQIINAGTSKSYVVRTMLPSIIPPSY 135
Query: 1426 RGTTIRYFYYVRSTLAGRWLVWENDQLRRESMKDLIQLEDRTPVNVWVSDKTSGLLVEEG 1247
+G+ IRY YYV+S + G WL+ EN Q R E D+ LE R P+ +WV+ K+SG ++
Sbjct: 136 KGSNIRYLYYVKSAITGGWLILENGQSRTEPTNDVTDLEVRIPLQIWVNQKSSGFPLD-- 193
Query: 1246 ATDGILPASTLGMDIYWKEKDADSEWARANETPDGIEEGYEXXXXXXXXXXSYNPTRGGL 1067
D I+P +T+ +DI+WKE D D++W RAN+ DG+E+GY+ SYNP + +
Sbjct: 194 --DDIVPLTTVQLDIFWKEMDGDADWVRANDIYDGVEDGYDSSRDDISSVSSYNPMKENM 251
Query: 1066 DQAQGISLSRQSSAPRFLSRDAAYLHGERSSFSSYVALPQLSVDEFLYDSSGDVRSPKKY 887
+ G SLS +SS+ R L+R L G R+S SS +ALP+LSV E L D+ D S +K
Sbjct: 252 VRGFGSSLSLRSSSARSLNR----LEGHRTSLSSNIALPRLSVAEVLSDTGADALSTQKS 307
Query: 886 PNVLSPSQQRKHTNSLSTDDDTQIPSILRT--IDRVASEGFVRGKSYNIRLDDQVLLRFS 713
++SP++Q+K S +DD + S ++ ++SEGF+RG+SYNIRLDDQVLL+FS
Sbjct: 308 FTMVSPTEQQKFGKQFSAEDDAGVSSSPEAGPVESLSSEGFIRGRSYNIRLDDQVLLKFS 367
Query: 712 PKTSDSTYYFGDTIGGTLTFFHE-GGRRCLEVAITLEISETIGQRIVHPSRRNSPTITKV 536
PK SDSTYYF D IGGTLTFFHE GGRRCLE+++TLE SETI +R VHPSRRNSPTITKV
Sbjct: 368 PKNSDSTYYFSDMIGGTLTFFHEQGGRRCLEISVTLETSETINRRFVHPSRRNSPTITKV 427
Query: 535 QSDYHEVVADLEQTSFHFSIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHPLL 356
QSD+HEVVADL QTSF FS+P+DGPM+FSTPHVSVQW LRFEF+TT K VDWT+Y+HPLL
Sbjct: 428 QSDHHEVVADLAQTSFLFSVPVDGPMTFSTPHVSVQWVLRFEFYTTPKFVDWTKYEHPLL 487
Query: 355 IEGRDKGEW 329
IEGR+K EW
Sbjct: 488 IEGREKTEW 496