BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001848
         (1583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3...   731   0.0  
ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3...   719   0.0  
ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putativ...   717   0.0  
ref|NP_001105848.1| putative RH2 protein [Zea mays] gi|84322402|...   716   0.0  
gb|ABK24405.1| unknown [Picea sitchensis]                             716   0.0  

>ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Vitis vinifera]
          Length = 412

 Score =  731 bits (1886), Expect = 0.0
 Identities = 371/412 (90%), Positives = 388/412 (94%), Gaps = 2/412 (0%)
 Frame = -1

Query: 1532 MAAVATTSA-PLQSRNRRNQP-DDEALVFETSHGVQPVTTFDQMGIKDDLLRGIYNHGFE 1359
            MAA AT S  P     RRN   DDE LVFET+ GV+P+ +FDQMGIKDDLLRGIY +GFE
Sbjct: 1    MAAAATASVVPANRGGRRNGAVDDEKLVFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFE 60

Query: 1358 KPSAIQQRAVLPIINGRDVIAQAQSGTGKTSMIALTSCQMVDTTNREVQVLILSPTRELA 1179
            KPSAIQQRAVLPII GRDVIAQAQSGTGKTSMIALT CQMVDT+NREVQ LILSPTRELA
Sbjct: 61   KPSAIQQRAVLPIIQGRDVIAQAQSGTGKTSMIALTVCQMVDTSNREVQALILSPTRELA 120

Query: 1178 SQTEKVILAVGDFMNIQVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTR 999
            SQTEKVILA+GDF+NIQ HACIGGKS+GEDIR+LE GVH+VSGTPGRVCDMIKRRTLRTR
Sbjct: 121  SQTEKVILAIGDFINIQAHACIGGKSVGEDIRKLEYGVHIVSGTPGRVCDMIKRRTLRTR 180

Query: 998  AIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPVRI 819
            AIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP+EILE+T+KFMTDPVRI
Sbjct: 181  AIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITNKFMTDPVRI 240

Query: 818  LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRS 639
            LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRS
Sbjct: 241  LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRS 300

Query: 638  NNFTVSSMHGDMPQKERDAIMVDFRSGETRVLITTDVWARGLDVHQVSLVINYDLPNNRE 459
            NNFTVSSMHGDMPQKERDAIM +FRSG TRVLITTDVWARGLDV QVSLVINYDLPNNRE
Sbjct: 301  NNFTVSSMHGDMPQKERDAIMAEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRE 360

Query: 458  LYIHRIGRSGRFGRKGVAINFVRTDDIRILRDIEQYYSTQIDEMPMNVADLI 303
            LYIHRIGRSGRFGRKGVAINFV+TDDI+ILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361  LYIHRIGRSGRFGRKGVAINFVKTDDIKILRDIEQYYSTQIDEMPMNVADLI 412


>ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Cucumis sativus]
            gi|449508400|ref|XP_004163303.1| PREDICTED: eukaryotic
            initiation factor 4A-3-like [Cucumis sativus]
          Length = 410

 Score =  719 bits (1857), Expect = 0.0
 Identities = 363/410 (88%), Positives = 383/410 (93%)
 Frame = -1

Query: 1532 MAAVATTSAPLQSRNRRNQPDDEALVFETSHGVQPVTTFDQMGIKDDLLRGIYNHGFEKP 1353
            MAA ATTS    +R R     ++ L FET+ GV+P+ TFDQMGIKDDLLRGIY +GFEKP
Sbjct: 1    MAAAATTSVVPPNRRRTISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKP 60

Query: 1352 SAIQQRAVLPIINGRDVIAQAQSGTGKTSMIALTSCQMVDTTNREVQVLILSPTRELASQ 1173
            SAIQQRAV PII GRDVIAQAQSGTGKTSMIALT CQMVDTT+REVQ LILSPTRELA+Q
Sbjct: 61   SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQ 120

Query: 1172 TEKVILAVGDFMNIQVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAI 993
            TEKVILA+GD++NIQ HACIGGKS+GEDIR+LE GV VVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121  TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 992  KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPVRILV 813
            KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMT+KFMTDPVRILV
Sbjct: 181  KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 812  KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNN 633
            KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV+WLTEKMRSNN
Sbjct: 241  KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 632  FTVSSMHGDMPQKERDAIMVDFRSGETRVLITTDVWARGLDVHQVSLVINYDLPNNRELY 453
            FTVS MHGDMPQKERDAIM +FRSG TRVLITTDVWARGLDV QVSLVINYDLPNNRELY
Sbjct: 301  FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 452  IHRIGRSGRFGRKGVAINFVRTDDIRILRDIEQYYSTQIDEMPMNVADLI 303
            IHRIGRSGRFGRKGVAINFV++DDI+ILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361  IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410


>ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223539871|gb|EEF41450.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 407

 Score =  717 bits (1850), Expect = 0.0
 Identities = 355/407 (87%), Positives = 387/407 (95%)
 Frame = -1

Query: 1523 VATTSAPLQSRNRRNQPDDEALVFETSHGVQPVTTFDQMGIKDDLLRGIYNHGFEKPSAI 1344
            +AT+  P     RR   +DE LVFET+ G++P+T+FD+MGIK+DLLRGIY +GFEKPSAI
Sbjct: 1    MATSVVPAGRSARRAAAEDEKLVFETTEGIEPITSFDEMGIKNDLLRGIYAYGFEKPSAI 60

Query: 1343 QQRAVLPIINGRDVIAQAQSGTGKTSMIALTSCQMVDTTNREVQVLILSPTRELASQTEK 1164
            QQRAV+PII GRDVIAQAQSGTGKTSMIALT+CQ+VDT++REVQ LILSPTRELA+QTEK
Sbjct: 61   QQRAVMPIIKGRDVIAQAQSGTGKTSMIALTACQLVDTSSREVQALILSPTRELAAQTEK 120

Query: 1163 VILAVGDFMNIQVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLL 984
            VILA+GD++NIQ HACIGGKS+GEDIR+LE GVHVVSGTPGRVCDMIKRRTLRTRAIKLL
Sbjct: 121  VILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLL 180

Query: 983  VLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPVRILVKRD 804
            VLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP+EILEMTSKFMTDP++ILVKRD
Sbjct: 181  VLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPIKILVKRD 240

Query: 803  ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTV 624
            ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR+NNFTV
Sbjct: 241  ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTV 300

Query: 623  SSMHGDMPQKERDAIMVDFRSGETRVLITTDVWARGLDVHQVSLVINYDLPNNRELYIHR 444
            SSMHGDMPQKERDAIM +F+SG TRVLITTDVWARGLDV QVSLVINYDLPNNRELYIHR
Sbjct: 301  SSMHGDMPQKERDAIMGEFQSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHR 360

Query: 443  IGRSGRFGRKGVAINFVRTDDIRILRDIEQYYSTQIDEMPMNVADLI 303
            IGRSGRFGRKGVAINFV++DDI+ILRD+EQYYSTQIDEMPMNVADLI
Sbjct: 361  IGRSGRFGRKGVAINFVKSDDIKILRDMEQYYSTQIDEMPMNVADLI 407


>ref|NP_001105848.1| putative RH2 protein [Zea mays] gi|84322402|gb|ABC55720.1| putative
            RH2 protein [Zea mays] gi|146217167|gb|ABQ10647.1| RNA
            helicase 2 [Zea mays] gi|194700534|gb|ACF84351.1| unknown
            [Zea mays] gi|413923950|gb|AFW63882.1| RNA helicase 2
            [Zea mays]
          Length = 407

 Score =  716 bits (1849), Expect = 0.0
 Identities = 365/407 (89%), Positives = 383/407 (94%), Gaps = 4/407 (0%)
 Frame = -1

Query: 1511 SAPLQSRN----RRNQPDDEALVFETSHGVQPVTTFDQMGIKDDLLRGIYNHGFEKPSAI 1344
            +AP  SR      RN  DDE L FETS GV+ V++FDQMGIKDDLLRGIY +GFEKPSAI
Sbjct: 2    AAPTTSRRGPGGARNM-DDENLTFETSPGVEVVSSFDQMGIKDDLLRGIYGYGFEKPSAI 60

Query: 1343 QQRAVLPIINGRDVIAQAQSGTGKTSMIALTSCQMVDTTNREVQVLILSPTRELASQTEK 1164
            QQRAVLPIINGRDVIAQAQSGTGKTSMI+LT CQ+VDT  REVQ LILSPTRELASQTE+
Sbjct: 61   QQRAVLPIINGRDVIAQAQSGTGKTSMISLTVCQIVDTAVREVQALILSPTRELASQTER 120

Query: 1163 VILAVGDFMNIQVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLL 984
            V+LA+GD +N+QVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLL
Sbjct: 121  VMLAIGDHLNVQVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLL 180

Query: 983  VLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPVRILVKRD 804
            VLDE+DEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMT+PVRILVKRD
Sbjct: 181  VLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTEPVRILVKRD 240

Query: 803  ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTV 624
            ELTLEGIKQFFVAVE+EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTV
Sbjct: 241  ELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTV 300

Query: 623  SSMHGDMPQKERDAIMVDFRSGETRVLITTDVWARGLDVHQVSLVINYDLPNNRELYIHR 444
            S+MHGDMPQ+ERDAIM +FRSG TRVLITTDVWARGLDV QVSLVINYDLPNNRELYIHR
Sbjct: 301  SAMHGDMPQQERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHR 360

Query: 443  IGRSGRFGRKGVAINFVRTDDIRILRDIEQYYSTQIDEMPMNVADLI 303
            IGRSGRFGRKGVAINFVR DDIRILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361  IGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI 407


>gb|ABK24405.1| unknown [Picea sitchensis]
          Length = 408

 Score =  716 bits (1849), Expect = 0.0
 Identities = 356/396 (89%), Positives = 378/396 (95%)
 Frame = -1

Query: 1490 NRRNQPDDEALVFETSHGVQPVTTFDQMGIKDDLLRGIYNHGFEKPSAIQQRAVLPIING 1311
            N RN   DE L+FETS GV+ +++FDQMGI+DDLLRGIY +GFEKPSAIQQRAV+PIING
Sbjct: 13   NGRNPDGDENLIFETSPGVEVISSFDQMGIRDDLLRGIYQYGFEKPSAIQQRAVMPIING 72

Query: 1310 RDVIAQAQSGTGKTSMIALTSCQMVDTTNREVQVLILSPTRELASQTEKVILAVGDFMNI 1131
            RDVIAQAQSGTGKTSMIAL  CQ++DT+ REVQ LI+SPTRELA+QTEKVILA+GDF+N+
Sbjct: 73   RDVIAQAQSGTGKTSMIALAVCQIIDTSIREVQALIVSPTRELAAQTEKVILAIGDFINV 132

Query: 1130 QVHACIGGKSIGEDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSR 951
            Q HACIGGKSIGEDIR+LE GVHVVSGTPGRVCDMIKRRTLRTRA+KLLVLDESDEMLSR
Sbjct: 133  QAHACIGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAVKLLVLDESDEMLSR 192

Query: 950  GFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFF 771
            GFKDQIYDVYRYLPPELQVVLISATLPHEILE+T+KFMTDPVRILVKRDELTLEGIKQFF
Sbjct: 193  GFKDQIYDVYRYLPPELQVVLISATLPHEILEITNKFMTDPVRILVKRDELTLEGIKQFF 252

Query: 770  VAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKE 591
            VAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKE
Sbjct: 253  VAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKE 312

Query: 590  RDAIMVDFRSGETRVLITTDVWARGLDVHQVSLVINYDLPNNRELYIHRIGRSGRFGRKG 411
            RDAIM +FR+G TRVLITTDVWARGLDV QVSLVINYDLPNNRELYIHRIGRSGRFGRKG
Sbjct: 313  RDAIMAEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG 372

Query: 410  VAINFVRTDDIRILRDIEQYYSTQIDEMPMNVADLI 303
            VAINFVR DDIRILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 373  VAINFVRNDDIRILRDIEQYYSTQIDEMPMNVADLI 408