BLASTX nr result

ID: Cimicifuga21_contig00001818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001818
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332545.1| BED finger-nbs-lrr resistance protein [Popul...    58   1e-06
gb|AAF19702.1|AC008047_9 F2K11.27 [Arabidopsis thaliana]               58   1e-06
ref|NP_176524.1| CC-NBS-LRR class disease resistance protein [Ar...    58   1e-06
ref|XP_002334197.1| nbs-lrr resistance protein [Populus trichoca...    57   2e-06
ref|XP_002333864.1| nbs-lrr resistance protein [Populus trichoca...    57   2e-06

>ref|XP_002332545.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832689|gb|EEE71166.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 931

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = +3

Query: 345 ILSNVLDPNVGMTSIYGSCGVGKTTAMMNISNELATY-DIFDSIFWVKVSTPLCLRTLQR 521
           ILS ++D  V +  IYG  GVGKTT +++I N+L    DI D ++WV VS    + TLQ 
Sbjct: 126 ILSLLMDDEVAIIGIYGMGGVGKTTIILHIYNKLLRRPDICDHVWWVTVSQDFSINTLQN 185

Query: 522 DIARQMNMNLS 554
            IA++++++LS
Sbjct: 186 FIAKRLDLDLS 196


>gb|AAF19702.1|AC008047_9 F2K11.27 [Arabidopsis thaliana]
          Length = 556

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 44/219 (20%)
 Frame = +3

Query: 24  MNRWTLNPLSHLTNLHDKMTS---KYEKLFAKEAEIRNELRRAQ---MTPTWEVIYWLDN 185
           +++W    +S+  NL   + +     E+L AK  ++  +L+R +   +    E+  WL+ 
Sbjct: 16  VSQWLDMKVSYTHNLEKNLVALETTMEELKAKRDDLLRKLKREEDRGLQTLGEIKVWLNR 75

Query: 186 VKRL----------RKASFLKKIICIFCHGKVDELLNSSCFIHGLFLTMKCTQRPER--- 326
           V+ +          R A   +  +C FC      L  S  +   +FL ++  ++ ER   
Sbjct: 76  VETIESRVNDLLNARNAELQRLCLCGFCS---KSLTTSYRYGKSVFLKLREVEKLERRVF 132

Query: 327 ------------------------SQLLDTILSNVLDPNVGMTSIYGSCGVGKTTAMMNI 434
                                     +LD   +++++  VG+  +YG  GVGKTT +  I
Sbjct: 133 EVISDQASTSEVEEQQLQPTIVGQETMLDNAWNHLMEDGVGIMGLYGMGGVGKTTLLTQI 192

Query: 435 SNELATYDI-FDSIFWVKVSTPLCLRTLQRDIARQMNMN 548
           +N+ + Y   FDS+ WV VS  + +  +  +IA++++++
Sbjct: 193 NNKFSKYMCGFDSVIWVVVSKEVNVENILDEIAQKVHIS 231


>ref|NP_176524.1| CC-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
           gi|46395964|sp|Q9C8T9.1|DRL19_ARATH RecName:
           Full=Putative disease resistance protein At1g63350
           gi|12324358|gb|AAG52150.1|AC022355_11 hypothetical
           protein; 11196-13892 [Arabidopsis thaliana]
           gi|332195968|gb|AEE34089.1| CC-NBS-LRR class disease
           resistance protein [Arabidopsis thaliana]
          Length = 898

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 44/219 (20%)
 Frame = +3

Query: 24  MNRWTLNPLSHLTNLHDKMTS---KYEKLFAKEAEIRNELRRAQ---MTPTWEVIYWLDN 185
           +++W    +S+  NL   + +     E+L AK  ++  +L+R +   +    E+  WL+ 
Sbjct: 16  VSQWLDMKVSYTHNLEKNLVALETTMEELKAKRDDLLRKLKREEDRGLQTLGEIKVWLNR 75

Query: 186 VKRL----------RKASFLKKIICIFCHGKVDELLNSSCFIHGLFLTMKCTQRPER--- 326
           V+ +          R A   +  +C FC      L  S  +   +FL ++  ++ ER   
Sbjct: 76  VETIESRVNDLLNARNAELQRLCLCGFCS---KSLTTSYRYGKSVFLKLREVEKLERRVF 132

Query: 327 ------------------------SQLLDTILSNVLDPNVGMTSIYGSCGVGKTTAMMNI 434
                                     +LD   +++++  VG+  +YG  GVGKTT +  I
Sbjct: 133 EVISDQASTSEVEEQQLQPTIVGQETMLDNAWNHLMEDGVGIMGLYGMGGVGKTTLLTQI 192

Query: 435 SNELATYDI-FDSIFWVKVSTPLCLRTLQRDIARQMNMN 548
           +N+ + Y   FDS+ WV VS  + +  +  +IA++++++
Sbjct: 193 NNKFSKYMCGFDSVIWVVVSKEVNVENILDEIAQKVHIS 231


>ref|XP_002334197.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870013|gb|EEF07144.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 938

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +3

Query: 345 ILSNVLDPNVGMTSIYGSCGVGKTTAMMNISNELATY-DIFDSIFWVKVSTPLCLRTLQR 521
           I S ++D  V    IYG  GVGKTT M +I NEL    DI D ++WV VS    +  LQ 
Sbjct: 159 IWSLLMDDEVPTIGIYGMGGVGKTTIMQHIHNELLQRPDICDHVWWVTVSQDFSINRLQN 218

Query: 522 DIARQMNMNLS 554
            IA Q+++NLS
Sbjct: 219 FIATQLHLNLS 229


>ref|XP_002333864.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838740|gb|EEE77105.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 957

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = +3

Query: 345 ILSNVLDPNVGMTSIYGSCGVGKTTAMMNISNELATY-DIFDSIFWVKVSTPLCLRTLQR 521
           I S ++D  V + SIYG  G+GKTT + +I NEL    DI D ++WV VS    ++ LQ 
Sbjct: 162 IWSLLMDDKVSIISIYGMGGIGKTTILQHIHNELLQRPDICDYVWWVTVSQDFSIKKLQN 221

Query: 522 DIARQMNMNLS 554
            IA++++++LS
Sbjct: 222 RIAKRLHLDLS 232


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