BLASTX nr result

ID: Cimicifuga21_contig00001788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001788
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36841.3| unnamed protein product [Vitis vinifera]              258   4e-66
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   258   4e-66
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   251   3e-64
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   248   2e-63
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   248   2e-63

>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  258 bits (658), Expect = 4e-66
 Identities = 122/136 (89%), Positives = 133/136 (97%)
 Frame = -2

Query: 1067 VRVCGTTAYVAQTAWIQNGTIQDNILFGTPMNTQRYREVIRVCSLEKDMEMMEFGDQTEI 888
            VR+CGTTAYVAQT+WIQNGTIQ+NILFG PMNT++YREVIRVC LEKD+EMME+GDQTEI
Sbjct: 272  VRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCCLEKDLEMMEYGDQTEI 331

Query: 887  GERGINLSGGQK*RIQLARAIYQDCDIYLLDDIFSAVDAHTGSDIFKECVRGALRNKTIL 708
            GERGINLSGGQK RIQLARA+YQDCD+YLLDD+FSAVDAHTG+DIFKECVRGALRNKTIL
Sbjct: 332  GERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTIL 391

Query: 707  LVTHQVDFLHNVDLIL 660
            LVTHQVDFLHNVDLIL
Sbjct: 392  LVTHQVDFLHNVDLIL 407


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  258 bits (658), Expect = 4e-66
 Identities = 122/136 (89%), Positives = 133/136 (97%)
 Frame = -2

Query: 1067 VRVCGTTAYVAQTAWIQNGTIQDNILFGTPMNTQRYREVIRVCSLEKDMEMMEFGDQTEI 888
            VR+CGTTAYVAQT+WIQNGTIQ+NILFG PMNT++YREVIRVC LEKD+EMME+GDQTEI
Sbjct: 702  VRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCCLEKDLEMMEYGDQTEI 761

Query: 887  GERGINLSGGQK*RIQLARAIYQDCDIYLLDDIFSAVDAHTGSDIFKECVRGALRNKTIL 708
            GERGINLSGGQK RIQLARA+YQDCD+YLLDD+FSAVDAHTG+DIFKECVRGALRNKTIL
Sbjct: 762  GERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTIL 821

Query: 707  LVTHQVDFLHNVDLIL 660
            LVTHQVDFLHNVDLIL
Sbjct: 822  LVTHQVDFLHNVDLIL 837


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1507

 Score =  251 bits (641), Expect = 3e-64
 Identities = 118/135 (87%), Positives = 130/135 (96%)
 Frame = -2

Query: 1067 VRVCGTTAYVAQTAWIQNGTIQDNILFGTPMNTQRYREVIRVCSLEKDMEMMEFGDQTEI 888
            +R+CGTTAYVAQT+WIQNGTI+DNILFG PMN +RY+EV+RVC LEKD+EMMEFGDQTEI
Sbjct: 701  IRICGTTAYVAQTSWIQNGTIEDNILFGLPMNKERYKEVLRVCCLEKDLEMMEFGDQTEI 760

Query: 887  GERGINLSGGQK*RIQLARAIYQDCDIYLLDDIFSAVDAHTGSDIFKECVRGALRNKTIL 708
            GERGINLSGGQK RIQLARA+YQDCDIYLLDDIFSAVDAHTG+DIFK+CVRGAL+ KTIL
Sbjct: 761  GERGINLSGGQKQRIQLARAVYQDCDIYLLDDIFSAVDAHTGTDIFKQCVRGALKGKTIL 820

Query: 707  LVTHQVDFLHNVDLI 663
            LVTHQVDFLHNVDLI
Sbjct: 821  LVTHQVDFLHNVDLI 835


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  248 bits (634), Expect = 2e-63
 Identities = 117/136 (86%), Positives = 130/136 (95%)
 Frame = -2

Query: 1067 VRVCGTTAYVAQTAWIQNGTIQDNILFGTPMNTQRYREVIRVCSLEKDMEMMEFGDQTEI 888
            VRVCGTTAYVAQT+WIQNGTIQ+NILFG PM+ ++Y EVIRVC LEKD+EMM++GDQTEI
Sbjct: 700  VRVCGTTAYVAQTSWIQNGTIQENILFGLPMDREKYNEVIRVCCLEKDLEMMDYGDQTEI 759

Query: 887  GERGINLSGGQK*RIQLARAIYQDCDIYLLDDIFSAVDAHTGSDIFKECVRGALRNKTIL 708
            GERGINLSGGQK RIQLARA+YQDCDIYLLDD+FSAVDAHTGSDIFKECVRGAL+ KTIL
Sbjct: 760  GERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIL 819

Query: 707  LVTHQVDFLHNVDLIL 660
            LVTHQVDFLHN+DLI+
Sbjct: 820  LVTHQVDFLHNIDLIM 835


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  248 bits (634), Expect = 2e-63
 Identities = 118/135 (87%), Positives = 129/135 (95%)
 Frame = -2

Query: 1067 VRVCGTTAYVAQTAWIQNGTIQDNILFGTPMNTQRYREVIRVCSLEKDMEMMEFGDQTEI 888
            VRVCGTTAYVAQT+WIQN TI++NILFG PMN ++Y+EVIRVC LEKD+EMMEFGDQTEI
Sbjct: 702  VRVCGTTAYVAQTSWIQNSTIEENILFGLPMNREKYKEVIRVCCLEKDLEMMEFGDQTEI 761

Query: 887  GERGINLSGGQK*RIQLARAIYQDCDIYLLDDIFSAVDAHTGSDIFKECVRGALRNKTIL 708
            GERGINLSGGQK RIQLARA+YQDCDIYLLDD+FSAVDAHTG+DIFKECVRGAL+ KTIL
Sbjct: 762  GERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGTDIFKECVRGALKGKTIL 821

Query: 707  LVTHQVDFLHNVDLI 663
            LVTHQVDFLHNVDLI
Sbjct: 822  LVTHQVDFLHNVDLI 836


Top