BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001786
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 is...   440   e-121
ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsi...   415   e-113
ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arab...   414   e-113
gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis tha...   410   e-112
ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis tha...   410   e-112

>ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
           vinifera] gi|297746225|emb|CBI16281.3| unnamed protein
           product [Vitis vinifera]
          Length = 245

 Score =  440 bits (1132), Expect = e-121
 Identities = 212/232 (91%), Positives = 221/232 (95%)
 Frame = +1

Query: 139 LGSELDSQRTLTPYVTGTSVIGIKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLL 318
           L S+ DSQRTL PYVTGTSVIG+KYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLL
Sbjct: 14  LCSQADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLL 73

Query: 319 GASGEISDFQEILRYLDELTTYDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLV 498
           GASGEISDFQEIL YLDEL  YDNMWDDGNSLGPKEVH+YLTRVMYNRRNKFNPLWNSLV
Sbjct: 74  GASGEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLV 133

Query: 499 LGGVKNGQKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDMSFEEAVKLLEKCM 678
           LGGVKNGQKYLG VSMIGVHFEDNHVATGFGNHLARPILRDEW ED+SFE+ VKLLEKCM
Sbjct: 134 LGGVKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDLSFEDGVKLLEKCM 193

Query: 679 LVLLYRDRSAINKLQVAKITEEGVTISQPYALKTFWGFTAFQNPTKGAEGSW 834
            VLLYRDRSA+NKLQ+AKITEEGVTISQPY+LKTFWGF+AFQNPT GAEGSW
Sbjct: 194 RVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVGAEGSW 245


>ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335580|gb|EFH65997.1| 20S proteasome beta subunit
           PBG1 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  415 bits (1066), Expect = e-113
 Identities = 199/234 (85%), Positives = 216/234 (92%)
 Frame = +1

Query: 133 GLLGSELDSQRTLTPYVTGTSVIGIKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHS 312
           G+  +E DSQRTL PYVTGTSV+ IKYKDGILMA+DMGGSYGSTLRYK++ERMK IGKHS
Sbjct: 12  GVKNAEADSQRTLYPYVTGTSVVAIKYKDGILMASDMGGSYGSTLRYKNIERMKAIGKHS 71

Query: 313 LLGASGEISDFQEILRYLDELTTYDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNS 492
           LLGASGEISDFQEILRYLDEL   DNMWDDGNSLGPKEV NYLTRV+YNRRNKFNPLWN+
Sbjct: 72  LLGASGEISDFQEILRYLDELMLNDNMWDDGNSLGPKEVLNYLTRVVYNRRNKFNPLWNT 131

Query: 493 LVLGGVKNGQKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDMSFEEAVKLLEK 672
           LV+GGVK G+KYLGMVSMIGV FEDNHVATGFGNHLARPILRDEW+ED+SFEE VKLLEK
Sbjct: 132 LVVGGVKYGEKYLGMVSMIGVSFEDNHVATGFGNHLARPILRDEWREDLSFEEGVKLLEK 191

Query: 673 CMLVLLYRDRSAINKLQVAKITEEGVTISQPYALKTFWGFTAFQNPTKGAEGSW 834
           CM VLLYRDRSAINKLQ+AK+TEEGVT+S+PY+LKTFW F AF NPT GAEGSW
Sbjct: 192 CMRVLLYRDRSAINKLQIAKMTEEGVTVSEPYSLKTFWDFKAFTNPTVGAEGSW 245


>ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata] gi|297337802|gb|EFH68219.1| hypothetical protein
           ARALYDRAFT_474808 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  414 bits (1063), Expect = e-113
 Identities = 195/230 (84%), Positives = 215/230 (93%)
 Frame = +1

Query: 145 SELDSQRTLTPYVTGTSVIGIKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGA 324
           +E +SQRTL PYVTGTS++ IKYKDG+LMA+DMGGSYGSTLRYK++ER+K IGKHSLLGA
Sbjct: 17  AEEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGA 76

Query: 325 SGEISDFQEILRYLDELTTYDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLG 504
           SGEISDFQEILRYLDELT  DNMWDDGNSLGPKE+HNYLTRVMYNRRNKFNPLWN+LVLG
Sbjct: 77  SGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLG 136

Query: 505 GVKNGQKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDMSFEEAVKLLEKCMLV 684
           GVKNG+ YLGMVSMIGV FED+HVATGFGNHLARPILRDEW  D+SFE+ VKLLEKCM V
Sbjct: 137 GVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRV 196

Query: 685 LLYRDRSAINKLQVAKITEEGVTISQPYALKTFWGFTAFQNPTKGAEGSW 834
           LLYRDRSAINKLQ+AKITEEGVT+SQPY+LKTFW F++F NPT GAEGSW
Sbjct: 197 LLYRDRSAINKLQIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAEGSW 246


>gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
          Length = 246

 Score =  410 bits (1055), Expect = e-112
 Identities = 194/230 (84%), Positives = 214/230 (93%)
 Frame = +1

Query: 145 SELDSQRTLTPYVTGTSVIGIKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGA 324
           +E +SQRTL PYVTGTSV+ IKYKDG+LMA+DMGGSYGSTLRYK++ER+K IGKHSLLGA
Sbjct: 17  AEEESQRTLYPYVTGTSVVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGA 76

Query: 325 SGEISDFQEILRYLDELTTYDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLG 504
           SGEISDFQEILRYLDELT  DNMWDDGNSLGPKE+HNYLTRVMYNRRNKFNPLWN+LVLG
Sbjct: 77  SGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLG 136

Query: 505 GVKNGQKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDMSFEEAVKLLEKCMLV 684
           GVKNG+ YLGMVSMIGV FED+HVATGFGNHLARPILRDEW  D+SFE+ VKLLEKCM V
Sbjct: 137 GVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRV 196

Query: 685 LLYRDRSAINKLQVAKITEEGVTISQPYALKTFWGFTAFQNPTKGAEGSW 834
           LLYRDRSAINKLQ+AKITEEGVT+SQPY+LKT+W F++F NPT GA GSW
Sbjct: 197 LLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246


>ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis thaliana]
           gi|82581521|sp|Q7DLR9.2|PSB4_ARATH RecName:
           Full=Proteasome subunit beta type-4; AltName: Full=20S
           proteasome beta subunit G-1; AltName: Full=Proteasome
           component H; AltName: Full=Proteasome subunit beta
           type-7; Flags: Precursor
           gi|12323023|gb|AAG51500.1|AC058785_3 20S proteasome beta
           subunit (PBG1) [Arabidopsis thaliana]
           gi|14190405|gb|AAK55683.1|AF378880_1 At1g56450/F13N6_3
           [Arabidopsis thaliana] gi|15010590|gb|AAK73954.1|
           At1g56450/F13N6_3 [Arabidopsis thaliana]
           gi|15450551|gb|AAK96453.1| At1g56450/F13N6_3
           [Arabidopsis thaliana] gi|62320870|dbj|BAD93840.1|
           putative protein [Arabidopsis thaliana]
           gi|332195276|gb|AEE33397.1| proteasome subunit beta
           type-4 [Arabidopsis thaliana]
          Length = 246

 Score =  410 bits (1054), Expect = e-112
 Identities = 193/230 (83%), Positives = 214/230 (93%)
 Frame = +1

Query: 145 SELDSQRTLTPYVTGTSVIGIKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGA 324
           +E +SQRTL PYVTGTS++ IKYKDG+LMA+DMGGSYGSTLRYK++ER+K IGKHSLLGA
Sbjct: 17  AEEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGA 76

Query: 325 SGEISDFQEILRYLDELTTYDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLG 504
           SGEISDFQEILRYLDELT  DNMWDDGNSLGPKE+HNYLTRVMYNRRNKFNPLWN+LVLG
Sbjct: 77  SGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLG 136

Query: 505 GVKNGQKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDMSFEEAVKLLEKCMLV 684
           GVKNG+ YLGMVSMIGV FED+HVATGFGNHLARPILRDEW  D+SFE+ VKLLEKCM V
Sbjct: 137 GVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRV 196

Query: 685 LLYRDRSAINKLQVAKITEEGVTISQPYALKTFWGFTAFQNPTKGAEGSW 834
           LLYRDRSAINKLQ+AKITEEGVT+SQPY+LKT+W F++F NPT GA GSW
Sbjct: 197 LLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246