BLASTX nr result

ID: Cimicifuga21_contig00001751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001751
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK43223.1| alpha-expansin [Ziziphus jujuba]                       384   e-104
ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinu...   381   e-103
gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremu...   379   e-102
gb|AEQ28765.1| expansin 3 [Prunus salicina]                           378   e-102
ref|XP_002315043.1| hypothetical protein POPTRDRAFT_659295 [Popu...   378   e-102

>gb|ACK43223.1| alpha-expansin [Ziziphus jujuba]
          Length = 250

 Score =  384 bits (986), Expect = e-104
 Identities = 187/242 (77%), Positives = 195/242 (80%)
 Frame = -1

Query: 1314 MKMAFLGLFMVGFLSMLSYVNXXXXXGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYG 1135
            MKMA  G F+VGFL M S V      GW+NAHATFY             GYGNLYSQGYG
Sbjct: 1    MKMALAGFFLVGFLGMFSSV-CGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYG 59

Query: 1134 TNTAALSTALFNNGLACGSCYEIRCVNDPKWCLPGSIVVTATXXXXXXXXXXXXNGGWCN 955
            TNTAALSTALFNNGL CGSCYEIRCVNDPKWCLPGSIVVTAT             GGWCN
Sbjct: 60   TNTAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCN 119

Query: 954  PPQHHFDLAQPVFQHIAQYRAGIVPVAYRRVDCRKRGGIRFTINGHSYFNLVLITNVGGA 775
            PPQHHFDL+QPVFQHIAQY+AGIVPV+YRRV C +RGGIRFTINGHSYFNLVLITNVGGA
Sbjct: 120  PPQHHFDLSQPVFQHIAQYKAGIVPVSYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGA 179

Query: 774  GDVHAVFVKGSRTGWQAMSRNWGQNWQSNSYFNGQSLSFKVITSDRRYVVSNNVAPAGWS 595
            GDVHAV +KGSRT WQAMSRNWGQNWQSN+Y NGQSLSFKV TSD R VVSNNVAPAGWS
Sbjct: 180  GDVHAVAIKGSRTRWQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSNNVAPAGWS 239

Query: 594  FG 589
            FG
Sbjct: 240  FG 241


>ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinus communis]
            gi|223538342|gb|EEF39949.1| Alpha-expansin 1 precursor,
            putative [Ricinus communis]
          Length = 249

 Score =  381 bits (979), Expect = e-103
 Identities = 185/240 (77%), Positives = 195/240 (81%)
 Frame = -1

Query: 1308 MAFLGLFMVGFLSMLSYVNXXXXXGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 1129
            MA L  F+VGFL+M+S VN     GW+NAHATFY             GYGNLYSQGYGTN
Sbjct: 1    MAPLVFFLVGFLAMVSSVNCYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 1128 TAALSTALFNNGLACGSCYEIRCVNDPKWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPP 949
            TAALSTALFN+GL+CGSCYEIRCVNDPKWCLPGSIVVTAT             GGWCNPP
Sbjct: 61   TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 120

Query: 948  QHHFDLAQPVFQHIAQYRAGIVPVAYRRVDCRKRGGIRFTINGHSYFNLVLITNVGGAGD 769
            Q HFDL+QPVFQHIAQYRAGIVPVAYRRV CR+RGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 121  QQHFDLSQPVFQHIAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 768  VHAVFVKGSRTGWQAMSRNWGQNWQSNSYFNGQSLSFKVITSDRRYVVSNNVAPAGWSFG 589
            VHAV +KGSRTGWQAMSRNWGQNWQSN+Y NGQSLSFKV TSD R VVS NVAP  WSFG
Sbjct: 181  VHAVAIKGSRTGWQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSYNVAPVSWSFG 240


>gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremuloides]
          Length = 249

 Score =  379 bits (973), Expect = e-102
 Identities = 179/240 (74%), Positives = 196/240 (81%)
 Frame = -1

Query: 1308 MAFLGLFMVGFLSMLSYVNXXXXXGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 1129
            MA  G+F+VGFL+M+S V      GW+NAHATFY             GYGNLYSQGYGTN
Sbjct: 1    MALAGIFLVGFLAMVSSVYGYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 1128 TAALSTALFNNGLACGSCYEIRCVNDPKWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPP 949
            TAALSTALFN+GL+CGSC+EIRCVNDPKWCLPGSIV+TAT             GGWCNPP
Sbjct: 61   TAALSTALFNSGLSCGSCFEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGWCNPP 120

Query: 948  QHHFDLAQPVFQHIAQYRAGIVPVAYRRVDCRKRGGIRFTINGHSYFNLVLITNVGGAGD 769
            QHHFDL+QPVFQHIAQYRAGIVPV+YRRV CR+RGGIRFT+NGHSYFNLVLITNVGGAGD
Sbjct: 121  QHHFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTVNGHSYFNLVLITNVGGAGD 180

Query: 768  VHAVFVKGSRTGWQAMSRNWGQNWQSNSYFNGQSLSFKVITSDRRYVVSNNVAPAGWSFG 589
            VH+V +KGSRTGWQ MSRNWGQNWQSN+Y NGQSLSFKV TSD R VVS NVAP+ WSFG
Sbjct: 181  VHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFG 240


>gb|AEQ28765.1| expansin 3 [Prunus salicina]
          Length = 252

 Score =  378 bits (970), Expect = e-102
 Identities = 185/243 (76%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
 Frame = -1

Query: 1314 MKMAFL-GLFMVGFLSMLSYVNXXXXXGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGY 1138
            MKMA   G  +VG L+M+S  +     GWVNA ATFY             GYGNLYSQGY
Sbjct: 1    MKMALAYGFCLVGLLAMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGY 60

Query: 1137 GTNTAALSTALFNNGLACGSCYEIRCVNDPKWCLPGSIVVTATXXXXXXXXXXXXNGGWC 958
            GTNTAALSTALFNNGL CGSCYEIRCVNDPKWCLPG+IVVTAT             GGWC
Sbjct: 61   GTNTAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWC 120

Query: 957  NPPQHHFDLAQPVFQHIAQYRAGIVPVAYRRVDCRKRGGIRFTINGHSYFNLVLITNVGG 778
            NPPQHHFDL+QPVFQHIAQYRAG+VPVAYRRV CR+RGGIRFTINGHSYFNLVLITNVGG
Sbjct: 121  NPPQHHFDLSQPVFQHIAQYRAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGG 180

Query: 777  AGDVHAVFVKGSRTGWQAMSRNWGQNWQSNSYFNGQSLSFKVITSDRRYVVSNNVAPAGW 598
            AGDVH+V VKGSRTGWQAMSRNWGQNWQSNSY NGQSLSFKV TSD R VVS N APAGW
Sbjct: 181  AGDVHSVSVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGW 240

Query: 597  SFG 589
            SFG
Sbjct: 241  SFG 243


>ref|XP_002315043.1| hypothetical protein POPTRDRAFT_659295 [Populus trichocarpa]
            gi|118488547|gb|ABK96086.1| unknown [Populus trichocarpa]
            gi|222864083|gb|EEF01214.1| hypothetical protein
            POPTRDRAFT_659295 [Populus trichocarpa]
          Length = 249

 Score =  378 bits (970), Expect = e-102
 Identities = 179/240 (74%), Positives = 195/240 (81%)
 Frame = -1

Query: 1308 MAFLGLFMVGFLSMLSYVNXXXXXGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 1129
            MA  G+F+VGFL+M+S V      GW+NAHATFY             GYGNLYSQGYGTN
Sbjct: 1    MALAGIFLVGFLAMVSSVYGYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 1128 TAALSTALFNNGLACGSCYEIRCVNDPKWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPP 949
            TAALSTALFN+GL+CGSCYEIRCVNDPKWCLPGSIV+TAT             GGWCNPP
Sbjct: 61   TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGWCNPP 120

Query: 948  QHHFDLAQPVFQHIAQYRAGIVPVAYRRVDCRKRGGIRFTINGHSYFNLVLITNVGGAGD 769
            QHHFDL+QPVFQHIAQ+RAGIVPV+YRRV CR+RGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 121  QHHFDLSQPVFQHIAQFRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 768  VHAVFVKGSRTGWQAMSRNWGQNWQSNSYFNGQSLSFKVITSDRRYVVSNNVAPAGWSFG 589
            VH+V +KGSRTGWQ MSRNWGQNWQSN+Y NGQSLSFKV TSD R VVS N AP+ WSFG
Sbjct: 181  VHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFG 240


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