BLASTX nr result

ID: Cimicifuga21_contig00001745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001745
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   751   0.0  
ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   749   0.0  
gb|AFW82994.1| hypothetical protein ZEAMMB73_566534 [Zea mays]        746   0.0  
ref|NP_001170610.1| uncharacterized protein LOC100384654 [Zea ma...   746   0.0  
gb|ADE76139.1| unknown [Picea sitchensis]                             746   0.0  

>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
            vinifera]
          Length = 428

 Score =  751 bits (1939), Expect = 0.0
 Identities = 375/388 (96%), Positives = 382/388 (98%)
 Frame = +3

Query: 237  YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 416
            YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV
Sbjct: 41   YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 100

Query: 417  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHECERFSTYLPDIKVAVFYGGVHIKNHK 596
            FVLSTLQQIEPV GQVAALVLCHTRELAYQICHE ERFSTYLPDIKVAVFYGGV+IK HK
Sbjct: 101  FVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 160

Query: 597  DLLKNECPHVVVGTPGRILALAREKDLPLKNVRHFILDECDKMLESLDMRKDVQEIFKMT 776
            DLLKNECPH+VVGTPGRILALAR+KDL LKNVRHFILDECDKMLESLDMR+DVQEIFKMT
Sbjct: 161  DLLKNECPHIVVGTPGRILALARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMT 220

Query: 777  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 956
            PHDKQVMMFSATLSKEIRPVCK+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL
Sbjct: 221  PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 280

Query: 957  NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMTQEERLTRYKSFKEGHK 1136
            NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM QEERLTRYK FKEGHK
Sbjct: 281  NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHK 340

Query: 1137 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASSSDSD 1316
            RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+S+SDSD
Sbjct: 341  RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 400

Query: 1317 VLNQVQERFEVDIKELPEQIDTSTYMPS 1400
            VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 401  VLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
            gi|297743441|emb|CBI36308.3| unnamed protein product
            [Vitis vinifera]
          Length = 428

 Score =  749 bits (1933), Expect = 0.0
 Identities = 373/388 (96%), Positives = 383/388 (98%)
 Frame = +3

Query: 237  YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 416
            YVGIHSSGFRDFLLKPELLR+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV
Sbjct: 41   YVGIHSSGFRDFLLKPELLRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 100

Query: 417  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHECERFSTYLPDIKVAVFYGGVHIKNHK 596
            FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHE ERFSTYLPDIKVAVFYGGV IK HK
Sbjct: 101  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHK 160

Query: 597  DLLKNECPHVVVGTPGRILALAREKDLPLKNVRHFILDECDKMLESLDMRKDVQEIFKMT 776
            DLLKNECPH+VVGTPGRILALAR+KDL LK+VRHFILDECDKMLESLDMR+DVQEIFKMT
Sbjct: 161  DLLKNECPHIVVGTPGRILALARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIFKMT 220

Query: 777  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 956
            PHDKQVMMFSATLSKEIRPVCK+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL
Sbjct: 221  PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 280

Query: 957  NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMTQEERLTRYKSFKEGHK 1136
            NDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNFPSICIHSGM QEERLTRYK+FKEGHK
Sbjct: 281  NDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSGMPQEERLTRYKNFKEGHK 340

Query: 1137 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASSSDSD 1316
            RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+S+SDSD
Sbjct: 341  RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 400

Query: 1317 VLNQVQERFEVDIKELPEQIDTSTYMPS 1400
            VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 401  VLNQVQERFEVDIKELPEQIDTSTYMPS 428


>gb|AFW82994.1| hypothetical protein ZEAMMB73_566534 [Zea mays]
          Length = 446

 Score =  746 bits (1927), Expect = 0.0
 Identities = 372/388 (95%), Positives = 381/388 (98%)
 Frame = +3

Query: 237  YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 416
            YVGIHSSGFRDFLLKPELLRAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV
Sbjct: 60   YVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 119

Query: 417  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHECERFSTYLPDIKVAVFYGGVHIKNHK 596
            FVLSTLQQI+PVAGQVAALVLCHTRELAYQICHE ERFS YLP+++VAVFYGGVHIKNHK
Sbjct: 120  FVLSTLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSKYLPELRVAVFYGGVHIKNHK 179

Query: 597  DLLKNECPHVVVGTPGRILALAREKDLPLKNVRHFILDECDKMLESLDMRKDVQEIFKMT 776
            DLLKNECPH+VVGTPGRILALAR+KDLPLKNVRHFILDECDKMLESLDMR+DVQEIFKMT
Sbjct: 180  DLLKNECPHIVVGTPGRILALARDKDLPLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 239

Query: 777  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 956
            PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKL
Sbjct: 240  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKL 299

Query: 957  NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMTQEERLTRYKSFKEGHK 1136
            NDLLDALDFNQVVIFVKSVSRAAELNKLL ECNFPSICIHSGMTQEERLTRYK+FKEGHK
Sbjct: 300  NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHK 359

Query: 1137 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASSSDSD 1316
            RILVATDLVGRGIDIERVNIV+NYDMPDSADTYLHRVGRAGRFGTKGLAITFV SSSDSD
Sbjct: 360  RILVATDLVGRGIDIERVNIVVNYDMPDSADTYLHRVGRAGRFGTKGLAITFV-SSSDSD 418

Query: 1317 VLNQVQERFEVDIKELPEQIDTSTYMPS 1400
            VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 419  VLNQVQERFEVDIKELPEQIDTSTYMPS 446


>ref|NP_001170610.1| uncharacterized protein LOC100384654 [Zea mays]
            gi|238006354|gb|ACR34212.1| unknown [Zea mays]
            gi|413950343|gb|AFW82992.1| hypothetical protein
            ZEAMMB73_566534 [Zea mays] gi|413950344|gb|AFW82993.1|
            hypothetical protein ZEAMMB73_566534 [Zea mays]
          Length = 427

 Score =  746 bits (1927), Expect = 0.0
 Identities = 372/388 (95%), Positives = 381/388 (98%)
 Frame = +3

Query: 237  YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 416
            YVGIHSSGFRDFLLKPELLRAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV
Sbjct: 41   YVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 100

Query: 417  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHECERFSTYLPDIKVAVFYGGVHIKNHK 596
            FVLSTLQQI+PVAGQVAALVLCHTRELAYQICHE ERFS YLP+++VAVFYGGVHIKNHK
Sbjct: 101  FVLSTLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSKYLPELRVAVFYGGVHIKNHK 160

Query: 597  DLLKNECPHVVVGTPGRILALAREKDLPLKNVRHFILDECDKMLESLDMRKDVQEIFKMT 776
            DLLKNECPH+VVGTPGRILALAR+KDLPLKNVRHFILDECDKMLESLDMR+DVQEIFKMT
Sbjct: 161  DLLKNECPHIVVGTPGRILALARDKDLPLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 220

Query: 777  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 956
            PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKL
Sbjct: 221  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKL 280

Query: 957  NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMTQEERLTRYKSFKEGHK 1136
            NDLLDALDFNQVVIFVKSVSRAAELNKLL ECNFPSICIHSGMTQEERLTRYK+FKEGHK
Sbjct: 281  NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHK 340

Query: 1137 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASSSDSD 1316
            RILVATDLVGRGIDIERVNIV+NYDMPDSADTYLHRVGRAGRFGTKGLAITFV SSSDSD
Sbjct: 341  RILVATDLVGRGIDIERVNIVVNYDMPDSADTYLHRVGRAGRFGTKGLAITFV-SSSDSD 399

Query: 1317 VLNQVQERFEVDIKELPEQIDTSTYMPS 1400
            VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 400  VLNQVQERFEVDIKELPEQIDTSTYMPS 427


>gb|ADE76139.1| unknown [Picea sitchensis]
          Length = 427

 Score =  746 bits (1925), Expect = 0.0
 Identities = 372/388 (95%), Positives = 380/388 (97%)
 Frame = +3

Query: 237  YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 416
            YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV
Sbjct: 40   YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99

Query: 417  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHECERFSTYLPDIKVAVFYGGVHIKNHK 596
            FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHE ERF TYL D+KVAVFYGGV+IK HK
Sbjct: 100  FVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFITYLTDLKVAVFYGGVNIKTHK 159

Query: 597  DLLKNECPHVVVGTPGRILALAREKDLPLKNVRHFILDECDKMLESLDMRKDVQEIFKMT 776
             LLKNECPH+VVGTPGRILALAREKDL LKNVRHFILDECD+MLESLDMRKDVQEIFKMT
Sbjct: 160  SLLKNECPHIVVGTPGRILALAREKDLNLKNVRHFILDECDRMLESLDMRKDVQEIFKMT 219

Query: 777  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 956
            PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL
Sbjct: 220  PHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279

Query: 957  NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMTQEERLTRYKSFKEGHK 1136
            NDLLDALDFNQVVIFVKSV+RAAELNKLLVECNFPSICIHSGMTQEERLTRYK FKEGHK
Sbjct: 280  NDLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMTQEERLTRYKGFKEGHK 339

Query: 1137 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASSSDSD 1316
            RILVATDLVGRGIDIERVNIV+NYDMPDSADTYLHRVGRAGRFGTKGLAITFV+S+SDSD
Sbjct: 340  RILVATDLVGRGIDIERVNIVVNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399

Query: 1317 VLNQVQERFEVDIKELPEQIDTSTYMPS 1400
            VLNQVQERFEVDIKELP QIDTSTYMPS
Sbjct: 400  VLNQVQERFEVDIKELPAQIDTSTYMPS 427


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