BLASTX nr result

ID: Cimicifuga21_contig00001744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001744
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283211.1| PREDICTED: DAG protein, chloroplastic isofor...    78   1e-12
ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [S...    75   1e-11
ref|NP_001149488.1| LOC100283114 [Zea mays] gi|195627510|gb|ACG3...    74   2e-11
ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea ma...    73   5e-11
ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [...    72   7e-11

>ref|XP_002283211.1| PREDICTED: DAG protein, chloroplastic isoform 1 [Vitis vinifera]
           gi|359493924|ref|XP_003634693.1| PREDICTED: DAG protein,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 229

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +1

Query: 97  FPLLIRTSIPNLTRRTMPMATPTIFSKLARYLPSPRLFSSSAIKPPPSSTVMETDGWIPP 276
           F  LI +S PN  R T+ +A P  F+ ++R    PRL S S    P  + V  +DG    
Sbjct: 12  FKTLISSSHPN-PRSTVQLAFPLRFNSISR----PRLTSRSGAVRPIRAAV--SDGEYSS 64

Query: 277 QISRNPYPHDS---PNVDMGIWLVTLYRWSDNVSDRE-MYDRSVDALAQVVGS-EEAKKK 441
           + S +  P ++   P  D   WL+ +    D    RE M D  ++ LA V+GS EEAKK 
Sbjct: 65  KRSSSNEPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKN 124

Query: 442 IYLISPNGYFPGFGASLNKETVDKLRGLECVRNVLPDYYFDARNKD 579
           +Y  S   Y  GF  ++++ET +K +GL  V  VLPD Y D +NKD
Sbjct: 125 MYAFSTTTY-TGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKD 169


>ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [Sorghum bicolor]
           gi|241938232|gb|EES11377.1| hypothetical protein
           SORBIDRAFT_06g027510 [Sorghum bicolor]
          Length = 216

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 58/153 (37%), Positives = 77/153 (50%), Gaps = 23/153 (15%)
 Frame = +1

Query: 190 LPSPRLFSSSAIKPPPSSTVMETDGWIP--------PQISRNPYPHDS------------ 309
           LPS RL SSS+I+PP      +  G +         P  S +P                 
Sbjct: 18  LPSRRLPSSSSIRPP-----RQRGGGVGSVRCMARRPDSSYSPLRSGQGGDRAPTEMAPL 72

Query: 310 -PNVDMGIWLVTLYR-WSDNVSDREMYDRSVDALAQVVGSEE-AKKKIYLISPNGYFPGF 480
            P  D   WL+ + +   +  + ++M D  +  LAQVVGSEE AKK+IY +S   YF GF
Sbjct: 73  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNVSCERYF-GF 131

Query: 481 GASLNKETVDKLRGLECVRNVLPDYYFDARNKD 579
           G  +++ET +KL GL  V  VLPD Y DA NKD
Sbjct: 132 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 164


>ref|NP_001149488.1| LOC100283114 [Zea mays] gi|195627510|gb|ACG35585.1| DAG protein
           [Zea mays] gi|223973333|gb|ACN30854.1| unknown [Zea
           mays]
          Length = 215

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 56/147 (38%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
 Frame = +1

Query: 190 LPSPRLFSSSAIKPP---------------PSSTVMETDGWIPPQISRNPYPHDSPNVDM 324
           LPS RL SSS+I+P                P ST            +        P  D 
Sbjct: 18  LPSRRLPSSSSIRPARQRAGVGCVRCMARRPDSTYSPLRSGQGGDRAPTEMAPLFPGCDY 77

Query: 325 GIWLVTLYR-WSDNVSDREMYDRSVDALAQVVGSEE-AKKKIYLISPNGYFPGFGASLNK 498
             WL+ + +   +  + ++M D  +  LAQVVGSEE AKK+IY +S   YF GFG  +++
Sbjct: 78  EHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNVSCERYF-GFGCEIDE 136

Query: 499 ETVDKLRGLECVRNVLPDYYFDARNKD 579
           ET +KL GL  V  VLPD Y DA NKD
Sbjct: 137 ETSNKLEGLPGVLFVLPDSYVDAENKD 163


>ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea mays]
           gi|194690760|gb|ACF79464.1| unknown [Zea mays]
          Length = 217

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
 Frame = +1

Query: 310 PNVDMGIWLVTLYR-WSDNVSDREMYDRSVDALAQVVGSEE-AKKKIYLISPNGYFPGFG 483
           P  D   WL+ + +   +  + ++M D  +  LAQV+GSEE AKKKIY +S   YF GFG
Sbjct: 75  PGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVLGSEEEAKKKIYNVSCERYF-GFG 133

Query: 484 ASLNKETVDKLRGLECVRNVLPDYYFDARNKD 579
             +++ET +KL GL  V  VLPD Y DA NKD
Sbjct: 134 CEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 165


>ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 215

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
 Frame = +1

Query: 310 PNVDMGIWLVTLYR-WSDNVSDREMYDRSVDALAQVVGSEE-AKKKIYLISPNGYFPGFG 483
           P  D   WL+ + +   +  + ++M D  +  LA+VVGSEE AKKKIY +S   YF GFG
Sbjct: 73  PGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYF-GFG 131

Query: 484 ASLNKETVDKLRGLECVRNVLPDYYFDARNKD 579
             +++ET +KL GL  V  VLPD Y DA NKD
Sbjct: 132 CEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 163


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